prot_D-mesarthrocarpus_Contig1018.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1018.1.1
Unique Nameprot_D-mesarthrocarpus_Contig1018.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length193
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA)

HSP 1 Score: 294 bits (752), Expect = 9.780e-97
Identity = 147/181 (81.22%), Postives = 166/181 (91.71%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKKQAMG 181
            V + QRVPATE+QGRVHTSTATVA+MPEVDEVTV+I   D+DMHTARAGGSGGQNVNKVETAVDL HKPTGIRIFCQQERSQLKNK+LAM +LR+RLYE+ELEKQQ+ VSGNRRAQVGSGARSEKIRTYNWKDSRCSDHR+ +N+PL +FLSG ID+MI+ CI++DQQE L EMA+KQA G
Sbjct:  187 VHRVQRVPATESQGRVHTSTATVAVMPEVDEVTVRIDPGDIDMHTARAGGSGGQNVNKVETAVDLFHKPTGIRIFCQQERSQLKNKELAMSILRSRLYEIELEKQQAAVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRINRNWPLDTFLSGTIDDMIAACIVMDQQEQLQEMARKQAQG 367          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 6.630e-92
Identity = 141/182 (77.47%), Postives = 166/182 (91.21%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSG-GIDNMISTCILLDQQEMLAEMAKKQAMG 181
            V + QRVPATETQGRVHTSTATVAIMPEVDEV V I+ ED+++ TAR+GGSGGQNVNKVE+AVDL HKPTGIRIFC QERSQLKN+++AMK+LR+R+Y++ELEKQQ+E SGNR+AQVGSG+RSEKIRTYNWKDSRCSDHR+GKNFPL +FLSG G+D+MI  CILLDQQE++AE+A KQ  G
Sbjct:  259 VHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAETSGNRKAQVGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLDQQELMAELAAKQRQG 440          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A140ECJ7_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140ECJ7_9STRA)

HSP 1 Score: 273 bits (698), Expect = 8.550e-88
Identity = 133/178 (74.72%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKKQ 178
            V + QRVPATETQGRVHTSTATVA+MPEVDEVTV+I  ++++MHTAR+GGSGGQNVNKVETAVDLLHKPTGIRIFC QERSQLKNK+LAM +LR++LYE+ELEKQQ +++G RR+Q+GSG RSEKIRTYNWKDSRC+DHRLG+NF L  FLSG ID MI+ C+L++Q E L +M+K+Q
Sbjct:  246 VHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVKIDPKEIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMTLLRSKLYEMELEKQQEQITGQRRSQIGSGGRSEKIRTYNWKDSRCTDHRLGQNFNLDKFLSGEIDEMINQCLLMEQNEKLEQMSKEQ 423          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK)

HSP 1 Score: 270 bits (690), Expect = 1.000e-86
Identity = 135/178 (75.84%), Postives = 158/178 (88.76%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKKQ 178
            V + QRVPATETQGRVHTSTATVAIMPEVDEVTV+I  +D+++ TAR+GG+GGQNVNKVETA DL HKPTGIRIFC QERSQLKNK++AM +LRARLYE+ELEKQ+SEVSG RRAQVG+GARSEKIRTYNWKDSRCSDHR+G+NFPL  FL G +D++I   I+ DQQ+ L EMA++Q
Sbjct:  235 VHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHKPTGIRIFCTQERSQLKNKEMAMNLLRARLYEMELEKQRSEVSGARRAQVGTGARSEKIRTYNWKDSRCSDHRIGQNFPLQMFLDGKVDDIIQALIVSDQQDQLKEMAEEQ 412          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A140ECK3_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140ECK3_9STRA)

HSP 1 Score: 268 bits (686), Expect = 3.570e-86
Identity = 131/179 (73.18%), Postives = 158/179 (88.27%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKKQA 179
            V + QRVPATETQGRVHTSTATVAIMPEVD+V VQI A+D++MHTAR+GGSGGQNVNKVETAVDLLHKPTGIRIFC QERSQLKNK+LAM++LR+RL+E+E EKQ+  ++G RR+Q+GSG RSEKIRTYNWKDSRC+DHRLG+NFPL +FL G ++ + + C+L +QQE LAEM  + A
Sbjct:  232 VHRVQRVPATETQGRVHTSTATVAIMPEVDDVQVQIDAKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQLLRSRLFEMEQEKQRESIAGQRRSQIGSGGRSEKIRTYNWKDSRCTDHRLGQNFPLQTFLDGNLEGITNQCLLQEQQEKLAEMQTQMA 410          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A140ECJ9_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Vischeria sp. CAUP Q 202 TaxID=1805947 RepID=A0A140ECJ9_9STRA)

HSP 1 Score: 262 bits (670), Expect = 6.930e-84
Identity = 128/179 (71.51%), Postives = 159/179 (88.83%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKKQA 179
            V + QRVPATETQGRVHTSTATVA+MPEVDEV V+I  +D++MHTAR+GGSGGQNVNKVETAVDLLHKPTGIRIFC QERSQLKNK+LAM++LR++LYE+E+EKQ +EV+G RR+Q+GSGARSEKIRTYNWKDSRC+DHRLG+NFPL + L G ++++ + C+L +QQE L  +  ++A
Sbjct:  224 VHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVRIDPKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQILRSKLYEMEVEKQMNEVTGQRRSQIGSGARSEKIRTYNWKDSRCTDHRLGQNFPLQTVLEGKLEDITNQCLLSEQQEKLEALQLQKA 402          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A5J4YU86_PORPP (Peptide chain release factor 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU86_PORPP)

HSP 1 Score: 263 bits (671), Expect = 2.400e-83
Identity = 134/177 (75.71%), Postives = 155/177 (87.57%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKK 177
            V + QRVPATE+QGRVHTSTATVAIMPEVDEVTV+I  +D++M TAR+GG+GGQNVNKVETAVDL HKPTGIRIFC QERSQL N++LAM MLRARLYE+ELEKQQSEV G R AQVG+GARSEK+RTYN+KDSRC+DHRL KNFPL SFL G I+ +I +CI+ DQQ  L EMA++
Sbjct:  281 VHRVQRVPATESQGRVHTSTATVAIMPEVDEVTVKIDPKDIEMTTARSGGAGGQNVNKVETAVDLTHKPTGIRIFCTQERSQLLNRELAMTMLRARLYEIELEKQQSEVRGARLAQVGTGARSEKVRTYNYKDSRCTDHRLNKNFPLQSFLDGAIEELIQSCIIDDQQRKLQEMAEQ 457          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A1X6PEJ9_PORUM (RF_PROK_I domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEJ9_PORUM)

HSP 1 Score: 260 bits (664), Expect = 3.110e-82
Identity = 133/179 (74.30%), Postives = 154/179 (86.03%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKKQA 179
            V + QRVPATE+QGRVHTST+TVAIMPEVDEV V+I  +DVD+ T R+GGSGGQNVNKVETAVDL+HKPTGIR+FC QERSQLKN++LAM++LRA+LYELELE   +EVSG RRAQVG+GARSEKIRTYN+KDSR SDHRLG+NF L +FL G ID+MI  CI  DQQE L EMA + A
Sbjct:  283 VHRVQRVPATESQGRVHTSTSTVAIMPEVDEVDVKIDMKDVDISTTRSGGSGGQNVNKVETAVDLMHKPTGIRVFCTQERSQLKNRELAMQILRAKLYELELEAHNAEVSGRRRAQVGTGARSEKIRTYNYKDSRVSDHRLGRNFSLNAFLEGDIDDMIQACIFADQQEQLEEMANEPA 461          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: A0A4D9DHG8_9STRA (RF_PROK_I domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHG8_9STRA)

HSP 1 Score: 256 bits (654), Expect = 6.060e-82
Identity = 127/174 (72.99%), Postives = 150/174 (86.21%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEM 174
            V + QRVPATETQGRVHTSTATVA+MPEVDEV V+I  +D+ + TAR+GGSGGQNVNKVETAVDLLHKPTGIRIFC QERSQLKNK+LAM MLR+RL++LE EKQ+  V+G RR+Q+GSG+RSEKIRTYNWKDSRC+DHRLG NFPL  FL G ++ + + C+LL+QQE L  M
Sbjct:  187 VHRVQRVPATETQGRVHTSTATVAVMPEVDEVQVKIDPKDITLTTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMSMLRSRLFDLEQEKQRDAVAGQRRSQIGSGSRSEKIRTYNWKDSRCTDHRLGTNFPLQMFLDGNLEEITNQCVLLEQQEKLEAM 360          
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Match: L1JFM6_GUITC (RF_PROK_I domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFM6_GUITC)

HSP 1 Score: 254 bits (649), Expect = 2.880e-81
Identity = 125/177 (70.62%), Postives = 155/177 (87.57%), Query Frame = 0
Query:    1 VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGGSGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYELELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASFLSGGIDNMISTCILLDQQEMLAEMAKK 177
            V + QRVPATETQGRVHTSTATVAIMPEVDEVTV+I A+D+ + TAR+ G+GGQNVNKVE+AVDL+H PTGIR+FCQQERSQLKNK++AM++LR +LYEL++E+Q SE+S  R+ QVG+G+RSEKIRTYNWKD RCSDHRL KNFPL  FLSG ++++I  CI  DQQ+ LA+MA++
Sbjct:  180 VHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDAKDISLTTARSSGAGGQNVNKVESAVDLVHIPTGIRVFCQQERSQLKNKEVAMQILRNKLYELQMEEQMSEISKQRKDQVGTGSRSEKIRTYNWKDGRCSDHRLNKNFPLQQFLSGDLESIIQECIFKDQQQKLADMAQE 356          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1018.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKN4_9STRA9.780e-9781.22Peptide chain release factor 1 n=1 Tax=Tribonema m... [more]
A0A6H5KZD5_9PHAE6.630e-9277.47RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A140ECJ7_9STRA8.550e-8874.72Plastid peptide chain release factor 1 n=1 Tax=Tra... [more]
A0A6S9M8F3_HETAK1.000e-8675.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A140ECK3_9STRA3.570e-8673.18Plastid peptide chain release factor 1 n=1 Tax=Mon... [more]
A0A140ECJ9_9STRA6.930e-8471.51Plastid peptide chain release factor 1 n=1 Tax=Vis... [more]
A0A5J4YU86_PORPP2.400e-8375.71Peptide chain release factor 1 n=1 Tax=Porphyridiu... [more]
A0A1X6PEJ9_PORUM3.110e-8274.30RF_PROK_I domain-containing protein n=1 Tax=Porphy... [more]
A0A4D9DHG8_9STRA6.060e-8272.99RF_PROK_I domain-containing protein n=3 Tax=Monodo... [more]
L1JFM6_GUITC2.880e-8170.62RF_PROK_I domain-containing protein n=1 Tax=Guilla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 29..124
e-value: 5.5E-49
score: 168.2
NoneNo IPR availableGENE3D3.30.70.1660coord: 3..159
e-value: 5.5E-49
score: 168.2
NoneNo IPR availablePANTHERPTHR43804LD18447Pcoord: 2..178
NoneNo IPR availablePANTHERPTHR43804:SF4PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTICcoord: 2..178
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 30..140
e-value: 1.1E-35
score: 122.0
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 47..63
IPR045853Peptide chain release factor class I superfamilySUPERFAMILY75620Release factorcoord: 1..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1018contigD-mesarthrocarpus_Contig1018:91..2300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1018.1.1mRNA_D-mesarthrocarpus_Contig1018.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1018 91..2300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1018.1.1 ID=prot_D-mesarthrocarpus_Contig1018.1.1|Name=mRNA_D-mesarthrocarpus_Contig1018.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=193bp
VLKFQRVPATETQGRVHTSTATVAIMPEVDEVTVQIKAEDVDMHTARAGG
SGGQNVNKVETAVDLLHKPTGIRIFCQQERSQLKNKDLAMKMLRARLYEL
ELEKQQSEVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRLGKNFPLASF
LSGGIDNMISTCILLDQQEMLAEMAKKQAMGAGAGAGAGAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I
IPR045853Pep_chain_release_fac_I_sf