Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10153.2.1 vs. uniprot
Match:
A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)
HSP 1 Score: 73.9 bits (180), Expect = 4.780e-10
Identity = 43/81 (53.09%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 757 IGTKSSPQGTLLPPPSLPPPASMSSYRAPGKSRGGAGEGGDVVVYQLLMQRWEMRPWVAVPRTLVVTKEQIVLMDEDHGNL 999
+G S GT P L P S S+ S GG EG VVV+QLL+QRWE+RPWV VPRTLV TKE++ LMDEDH +
Sbjct: 1686 VGAPPSLSGTATP--LLSPTVSSSNVVETPPSVGGGHEG-TVVVFQLLVQRWELRPWVVVPRTLVATKEKLALMDEDHSRV 1763
BLAST of mRNA_D-mesarthrocarpus_Contig10153.2.1 vs. uniprot
Match:
D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)
HSP 1 Score: 68.2 bits (165), Expect = 3.030e-8
Identity = 51/141 (36.17%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 580 DHHSRGGGSA-SKIFRGLTLKLPGSDMGSAPLEKTGAEAPKAAHSGDLADLHRSPDSGAGIGTKSSPQGTLLPPPS--------LPPPASMSSYRAPGKSRGGAGEGGDVVVYQLLMQRWEMRPWVAVPRTLVVTKEQIVL 975
D RGGG A + G + G+ G + +E A D A+ H + +G S GT+ P PS + P S+ GG G G VVV+QLL+QRWE+RPWV VPRTLV TKE++V+
Sbjct: 1675 DEDCRGGGVALGSVHGGGAVMDDGNGQGGREGDGDSSEVAGAGEGADAAETHDTASWDL-VGAPPSLSGTVTPLPSPTVRGRNVVETPPSVLVRSGVDVGDGGGGHEGTVVVFQLLVQRWELRPWVVVPRTLVATKEKVVV 1814
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10153.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 4.78e-10 / Id = 53.09 Expect = 3.03e-8 / Id = 36.17 Sequence A0A6H5K372_9PHAE D8LMA8_ECTSI
Match Name E-value Identity Description
A0A6H5K372_9PHAE 4.780e-10 53.09 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D8LMA8_ECTSI 3.030e-8 36.17 Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 2880.D8LMA8 PFAMs LRR_4,LRR_6,LRR_8 Model size 1544 Max annot lvl 2759|Eukaryota Hectar predicted targeting category other localisation Exons 2 Evalue 1.41e-09 EggNOG OGs KOG1859@1|root,KOG1259@2759|Eukaryota Description norepinephrine secretion Cds size 1011 COG category P
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789159.1394086-UTR-D-mesarthrocarpus_Contig10153:1301..1832 1680789159.1394086-UTR-D-mesarthrocarpus_Contig10153:1301..1832 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10153 1302..1832 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789159.1523764-CDS-D-mesarthrocarpus_Contig10153:1832..2267 1680789159.1523764-CDS-D-mesarthrocarpus_Contig10153:1832..2267 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10153 1833..2267 + 1680789159.1623757-CDS-D-mesarthrocarpus_Contig10153:3003..3579 1680789159.1623757-CDS-D-mesarthrocarpus_Contig10153:3003..3579 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10153 3004..3579 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10153.2.1
>prot_D-mesarthrocarpus_Contig10153.2.1 ID=prot_D-mesarthrocarpus_Contig10153.2.1|Name=mRNA_D-mesarthrocarpus_Contig10153.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=337bp
MTLPPPPTLGERLVEMDHHSRGGGSASKIFRGLTLKLPGSDMGSAPLEKT back to top mRNA from alignment at D-mesarthrocarpus_Contig10153:1302..3579+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10153.2.1 ID=mRNA_D-mesarthrocarpus_Contig10153.2.1|Name=mRNA_D-mesarthrocarpus_Contig10153.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2278bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10153:1302..3579+ (Discosporangium mesarthrocarpum MT17_79)CCAGACCAGCTTTCGGGAGCGTGCATGCAGCGAGGGGTGATGGGGAACAT
GGGTCCGCGACAGGTGTGTATTGGTTCCAAATTCATACCAATACTGATAC
CACGTCGTTACCGTGGTGTCATGTTGTATCAGTGCATTATCGTCTCAATA
TGCATCTCTGGTCCACACCTCCAAGAAGTGAGGGGTGGGACTCTCTCAAA
CAGAGGGTGGAGGAGCCGACCACCCCACAACGGAGGAGGAAGAAGTAGCG
TGAGAGTTGGAAGGTCAGGGCCTCAAGCCTCACGGGGTCTAGGTTGGAGT
TGTGGTTTCCTCAACCAGCAGCCTTACTAATCAGGGTGCTCACTCCTTCC
CAAAGACTCGATGCCCTGCGTCTCTTTCCACCTGGTCCTGCAGTCTTTTC
CTTTCAAGAAGATGAAAACAATGCTTGCCCATCCACCCCCCCTGCCCCAT
AGCTGACTCACAGACATCCACCCTTTCCTTTTCTGCCCCTCTCCCCCTGC
ATGTCAGAGCATCACCCAGACTCTACCCCTG ATGACCTTGCCCCCGCCGC
CCACACTGGGGGAACGCCTGGTGGAGATGGACCACCATAGCAGGGGTGGT
GGCAGTGCGAGCAAGATTTTCCGGGGCCTTACCCTCAAGCTGCCTGGGTC
GGACATGGGCTCAGCGCCCCTGGAGAAGACAGGGGCAGAAGCGCCCAAGG
CTGCCCACAGCGGAGATCTGGCAGACCTCCACAGGTCCCCTGACTCTGGA
GCAGGCATCGGGACGAAATCTTCGCCCCAGGGCACTCTGCTTCCGCCGCC
ATCACTGCCACCTCCTGCCTCTATGAGCAGCTACAGGGCTCCCGGGAAGA
GCAGGGGGGGAGCAGGGGAAGGGGGTGATGTTGTTGTGTACCAACTCCTG
ATGCAGCGTTGGGAGATGAGGCCATGGGTCGCAGTCCCAAGGACCCTTGT
GGTGACCAAGGAGCAG GTAGGGTATAGGGGGAGGGGGAAGGGGAGGGGGA
AGGGGAGGGTGGAAGGCCAGGCCGTGGGTGGCAGTTCCGCAGACCCTGTT
GTGGAAGGTCTAAGAGCAGATAAAATCCAGACGGCAATATTGGGGTTTCG
CTGTGCGTGTGGGGTTGTAAGTAGGGGTTGGGTTGAGGTTTAGTCAGTGT
TAGAGGAATGAAGGCAGCTGGGCTGGGGCTTGTACAGGTGAGTGGATAGG
GTCAGGGCTACTACTGTGGATGGGCTGACTTGAGGGTCACGGGGGAGAGT
GGCAGGACCTAAGGATGTGGGTGGTGGGTGCTGGCACTGGGAGTTGGGTG
GGTACCGGCACTGGGGGTTCAGTGGGTGCCAGCATTGGGGGCTTGGGTGG
GGGTGCCTTCAACTGCTGTCATTGGAGCTGCACATAGGAAGTTCTTTTTC
CCTCTGATGTGCATGTTCAGACGTATTTCAGAAGAACGTCGGAAGAATTT
CGGAAGTATGCGCATTGTCGATGGCGAAATACTGCATGTGTTAGGCCTAC
CATTCCAGCCCAGCTGACCAACTCAGACGCCTCATTCGCCCTGTCCCTAA
CCCTAACCCCTAACCCTAACCCTAACCCCTAACCCTAACCCCTAATCCCT
AACCCCTAACCCCTAACCCCTGACCCCTGACCCCTGACCCCTGACCCCTG
TAACCCCTGTGTAACCTGGCCGTGCGTCCAATCACTGCGATTGCCATGGC
AGATCGTTCTGATGGATGAGGACCACGGCAACCTGTGGAGGATGCCTGGT
AGGGTCTCGGAGCTCCTCCGGCGAAACACCCAGAAGAAGACGGCAAAGAC
CCCAGAGGATGCCCCCCGGGACCCTCACACAATCCCCTCTGTAAAAATCA
GCACAGAGACCCCAAGCACTTCTTGTGGGTCGCCGATACCGACGCCGACA
CTAACACCAATGCCAGCCCTACAAAACCCCTGCACCAGCAGCATCCCCTG
CCCGCCAGGAGGGTCAGAGGAGGGAACGGCAGGACCTGGCATTGCCCAGC
CTGCCCAATCAACCCACCCACCCCTGCCCGGTTCCGCTCCCGCTTCCACC
GTTGGGCTCATCAGGTGCATGCCCAATAGAGGGGAAAACCGATCCTGCGG
GAGCGATGAAGGACCCGCCCCCAAGGGCAAGACTGGCACACAAGTGTTAT
GGCAACAGTCTTTCCCCCCATCACCTGGTGACGCTGAAGGTGGGGGGGGT
AGGGACAGCAGCATGAGCCCCGGGGAGAACGGCAGGGTGCCAAGACTCTT
GGCAGACGTGACATCACAAGCAGATCCG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10153:1302..3579+
>mRNA_D-mesarthrocarpus_Contig10153.2.1 ID=mRNA_D-mesarthrocarpus_Contig10153.2.1|Name=mRNA_D-mesarthrocarpus_Contig10153.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1011bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10153:1302..3579+ (Discosporangium mesarthrocarpum MT17_79) back to top