prot_D-mesarthrocarpus_Contig10152.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10152.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10152.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length127
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Match: D7FQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ90_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 3.840e-29
Identity = 53/77 (68.83%), Postives = 68/77 (88.31%), Query Frame = 0 
Query:    1 PSLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQ-VTGARPNKVSYDLVMQACGHGGEWELGVALLEDMREV 76
            P+ +++PDV+S+TSAIHAC+GP GNWEKAY QLLD MWQ   GA+P+K +YDLV+QACGHGGEWELGV L++DMR++
Sbjct:    2 PAAKVKPDVISFTSAIHACAGPTGNWEKAY-QLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDL 77
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BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Match: A0A6H5L2A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.320e-18
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:    1 PSLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQ-VTGARPNKVSYDLVMQACGHGGEWELGVALLEDMREV 76
            P+ +++             +GP GNWEKAY QLLD MWQ   GA+P+K +YDLV+QACGHGGEWELGV L++DMR++
Sbjct:  419 PAAKVKXXXXXXXXXXXXXAGPTGNWEKAY-QLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDL 494
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BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Match: A0A7S0LID2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LID2_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 8.090e-6
Identity = 27/63 (42.86%), Postives = 35/63 (55.56%), Query Frame = 0 
Query:    2 SLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQVTGARPNKVSYDLVMQACGHGGEWE 64
            S ++ PDVVSY +AI ACS  + +W     +LL +M    G RPN  +Y     AC  GG WE
Sbjct:   45 SPRMPPDVVSYATAISACSRDSAHWRTGV-ELLRQM-DAVGVRPNVFAYASAASACATGGAWE 105
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10152.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ90_ECTSI3.840e-2968.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2A2_9PHAE1.320e-1854.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0LID2_9EUKA8.090e-642.86Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..126
e-value: 3.0E-32
score: 114.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 48..81
e-value: 2.7E-5
score: 22.1
coord: 84..117
e-value: 6.5E-8
score: 30.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 84..126
e-value: 1.3E-8
score: 34.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 4..58
e-value: 8.4E-5
score: 22.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 11.290196
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 10.226951
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 6..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10152contigD-mesarthrocarpus_Contig10152:2644..3571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10152.1.1mRNA_D-mesarthrocarpus_Contig10152.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10152 2644..3571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10152.1.1 ID=prot_D-mesarthrocarpus_Contig10152.1.1|Name=mRNA_D-mesarthrocarpus_Contig10152.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=127bp
PSLQLQPDVVSYTSAIHACSGPNGNWEKAYYQLLDKMWQVTGARPNKVSY
DLVMQACGHGGEWELGVALLEDMREVGATPDLQSFNIAVSACARCGEWKE
AFLLVGLMRRAGVVPDAFTYSALIHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat