Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A5K3FYK6_MESCO (DNA-directed DNA polymerase n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FYK6_MESCO)
HSP 1 Score: 51.6 bits (122), Expect = 7.030e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 58 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 186
PT S+G YTGATVFEPV G +DE I DF+SFYPSII+ N+
Sbjct: 376 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 421
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A5K3FTS7_MESCO (DNA-directed DNA polymerase n=4 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FTS7_MESCO)
HSP 1 Score: 51.6 bits (122), Expect = 7.260e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 58 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 186
PT S+G YTGATVFEPV G +DE I DF+SFYPSII+ N+
Sbjct: 539 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 584
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A6C0JKJ5_9ZZZZ (DNA-directed DNA polymerase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JKJ5_9ZZZZ)
HSP 1 Score: 51.6 bits (122), Expect = 7.430e-5
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 1
Query: 64 PSSSGTYTGATVFEPVTGLFDEIKAYDFASFYPSIILCANV 186
P Y GATVFEPV G++D++ +DFAS YPS I+ N+
Sbjct: 485 PKDDDHYVGATVFEPVAGVYDKVLPFDFASLYPSTIIAYNI 525
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A0R3U9G7_MESCO (DNA-directed DNA polymerase n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U9G7_MESCO)
HSP 1 Score: 51.6 bits (122), Expect = 7.440e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 58 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 186
PT S+G YTGATVFEPV G +DE I DF+SFYPSII+ N+
Sbjct: 539 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 584
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 7.03e-5 / Id = 60.87 Expect = 7.26e-5 / Id = 60.87 Expect = 7.43e-5 / Id = 51.22 Expect = 7.44e-5 / Id = 60.87 Sequence A0A5K3FYK6_MESCO A0A5K3FTS7_MESCO A0A6C0JKJ5_9ZZZZ A0A0R3U9G7_MESCO back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 188763.Q8QS34_9BETA Model size 417 Max annot lvl 548681|Herpesvirales Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004527,GO:0004540,GO:0005575,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016032,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0018130,GO:0018995,GO:0019058,GO:0019079,GO:0019438,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0039686,GO:0039693,GO:0042025,GO:0042221,GO:0043170,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0046483,GO:0050896,GO:0051704,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902074 Exons 1 Evalue 0.000188 EggNOG OGs 4QB40@10239|Viruses,4QV3M@35237|dsDNA viruses no RNA stage,4R1DR@548681|Herpesvirales Description 3'-5' exonuclease activity Cds size 411 COG category L
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789158.3576434-UTR-D-mesarthrocarpus_Contig10144:249..255 1680789158.3576434-UTR-D-mesarthrocarpus_Contig10144:249..255 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10144 250..255 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789158.3721294-CDS-D-mesarthrocarpus_Contig10144:255..666 1680789158.3721294-CDS-D-mesarthrocarpus_Contig10144:255..666 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10144 256..666 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10144.1.1
>prot_D-mesarthrocarpus_Contig10144.1.1 ID=prot_D-mesarthrocarpus_Contig10144.1.1|Name=mRNA_D-mesarthrocarpus_Contig10144.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=137bp
MSLMSFQYSRGKVIDWTPTPSSSGTYTGATVFEPVTGLFDEIKAYDFASF back to top mRNA from alignment at D-mesarthrocarpus_Contig10144:250..666+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10144.1.1 ID=mRNA_D-mesarthrocarpus_Contig10144.1.1|Name=mRNA_D-mesarthrocarpus_Contig10144.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=417bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10144:250..666+ (Discosporangium mesarthrocarpum MT17_79)GTAACT ATGTCTCTCATGTCATTCCAGTACTCAAGGGGCAAGGTCATAGA
CTGGACACCTACTCCTTCATCCAGTGGTACCTACACAGGTGCAACGGTGT
TCGAGCCTGTCACGGGCTTGTTTGATGAAATCAAGGCCTATGACTTCGCA
TCCTTTTACCCCTCCATCATACTGTGCGCCAACGTGTCAAAGGAGATACC
AATCTCTAGCACCTCTGTCCTATCATCCACTCGTGATGGAATCGTTGATT
GGTCGACTAACAACGTATCGGTCGGCATCGAAGAACACGTGGACGTCTAC
GATCTATCCGTTGACAATGTAACCAAGAACACGATGCAAGAGCTCATCAA
CATCAGAATGAAGGTGGGCAAGAAGACACCCCAAGGATGGGCACTGCATT
CTAATCCTTCAAGATAG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10144:250..666+
>mRNA_D-mesarthrocarpus_Contig10144.1.1 ID=mRNA_D-mesarthrocarpus_Contig10144.1.1|Name=mRNA_D-mesarthrocarpus_Contig10144.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=411bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10144:250..666+ (Discosporangium mesarthrocarpum MT17_79) back to top