Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A5K3FYK6_MESCO (DNA-directed DNA polymerase n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FYK6_MESCO)
HSP 1 Score: 51.6 bits (122), Expect = 6.650e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query: 18 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 60
PT S+G YTGATVFEPV G +DE I DF+SFYPSII+ N+
Sbjct: 376 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 421
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A5K3FTS7_MESCO (DNA-directed DNA polymerase n=4 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FTS7_MESCO)
HSP 1 Score: 51.6 bits (122), Expect = 6.860e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query: 18 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 60
PT S+G YTGATVFEPV G +DE I DF+SFYPSII+ N+
Sbjct: 539 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 584
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A6C0JKJ5_9ZZZZ (DNA-directed DNA polymerase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JKJ5_9ZZZZ)
HSP 1 Score: 51.6 bits (122), Expect = 7.020e-5
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 0
Query: 20 PSSSGTYTGATVFEPVTGLFDEIKAYDFASFYPSIILCANV 60
P Y GATVFEPV G++D++ +DFAS YPS I+ N+
Sbjct: 485 PKDDDHYVGATVFEPVAGVYDKVLPFDFASLYPSTIIAYNI 525
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match:
A0A0R3U9G7_MESCO (DNA-directed DNA polymerase n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U9G7_MESCO)
HSP 1 Score: 51.6 bits (122), Expect = 7.030e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query: 18 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 60
PT S+G YTGATVFEPV G +DE I DF+SFYPSII+ N+
Sbjct: 539 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 584
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 4
M S L M S F Q Y S R G K V I D W T P T P S S S G T Y T G A T V F E P V T G L F D E I K A Y D F A S F Y P S I I L C A N V S K E I P I S S T S V L S S T R D G I V D W S T N N V S V G I E E H V D V Y D L S V D N V T K N T M Q E L I N I R M K V G K K T P Q G W A L H S N P S R * 20 40 60 80 100 120 Expect = 6.65e-5 / Id = 60.87 Expect = 6.86e-5 / Id = 60.87 Expect = 7.02e-5 / Id = 51.22 Expect = 7.03e-5 / Id = 60.87 Sequence A0A5K3FYK6_MESCO A0A5K3FTS7_MESCO A0A6C0JKJ5_9ZZZZ A0A0R3U9G7_MESCO back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M S L M S F Q Y S R G K V I D W T P T P S S S G T Y T G A T V F E P V T G L F D E I K A Y D F A S F Y P S I I L C A N V S K E I P I S S T S V L S S T R D G I V D W S T N N V S V G I E E H V D V Y D L S V D N V T K N T M Q E L I N I R M K V G K K T P Q G W A L H S N P S R * 20 40 60 80 100 120 Expect = 1.6E-10 / Score = 42.9 Expect = 3.4E-10 / Score = 39.2 Expect = 1.6E-10 / Score = 42.9 Score = Sequence G3DSA:3.90.1600.10 PF00136 G3DSA:1.10.287.690 SSF56672
IPR Term IPR Description Source Source Term Source Description Alignment
IPR023211 DNA polymerase, palm domain superfamily GENE3D 3.90.1600.10 Palm domain of DNA polymerase coord: 25..103 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain PFAM PF00136 DNA_pol_B coord: 23..83 None No IPR available GENE3D 1.10.287.690 Helix hairpin bin coord: 104..123 IPR043502 DNA/RNA polymerase superfamily SUPERFAMILY 56672 DNA/RNA polymerases coord: 24..123
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_D-mesarthrocarpus_Contig10144.1.1 ID=prot_D-mesarthrocarpus_Contig10144.1.1|Name=mRNA_D-mesarthrocarpus_Contig10144.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=137bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: