mRNA_D-mesarthrocarpus_Contig1014.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1014.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig1014.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI001FB626C3 (deleted in lung and esophageal cancer protein 1 isoform X1 n=3 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB626C3)

HSP 1 Score: 51.6 bits (122), Expect = 1.940e-6
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF V+P+AGTL P+ ++ V +TAY D  G+Y+DR+ C
Sbjct: 1154 GKGAAFFVLPDAGTLGPFETQTVDVTAYTDMWGEYRDRLIC 1194
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI00094F3642 (deleted in lung and esophageal cancer protein 1 isoform X1 n=3 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094F3642)

HSP 1 Score: 50.8 bits (120), Expect = 3.630e-6
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF +VP AGTL P+ ++ V +TAY+D  GDY+D + C
Sbjct: 1138 GKGAAFFIVPCAGTLEPFETQTVDVTAYSDMWGDYRDNLVC 1178
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI000497D68B (deleted in lung and esophageal cancer protein 1 n=1 Tax=Stegastes partitus TaxID=144197 RepID=UPI000497D68B)

HSP 1 Score: 50.4 bits (119), Expect = 4.970e-6
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF+V+P+AGTL P+ ++ V +TAY D  G+Y+D + C
Sbjct: 1111 GKGAAFIVLPDAGTLGPFETQTVDVTAYTDMWGEYRDHLIC 1151
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI001CD82A8C (deleted in lung and esophageal cancer protein 1 isoform X1 n=2 Tax=Solea senegalensis TaxID=28829 RepID=UPI001CD82A8C)

HSP 1 Score: 50.1 bits (118), Expect = 6.800e-6
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAFLV+P  GTL P+ ++ V +TAY D  G+Y+DR+ C
Sbjct: 1117 GKGAAFLVLPNTGTLGPFETQIVDVTAYTDMWGEYRDRLIC 1157
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI00188627C9 (deleted in lung and esophageal cancer protein 1 isoform X1 n=4 Tax=Syngnathus acus TaxID=161584 RepID=UPI00188627C9)

HSP 1 Score: 50.1 bits (118), Expect = 6.800e-6
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:    7 GAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            GAAF +VP AGTL P+ ++ V +TAY+D  G+YKD + C
Sbjct: 1102 GAAFFIVPSAGTLEPFETQTVDVTAYSDVWGEYKDNLIC 1140
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI00189D8479 (deleted in lung and esophageal cancer protein 1 n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189D8479)

HSP 1 Score: 49.7 bits (117), Expect = 9.300e-6
Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF V+P+AGTL P+ ++ V +TAY D  G+Y+D + C
Sbjct: 1120 GKGAAFFVLPDAGTLGPFETQTVDVTAYTDMWGEYRDHLIC 1160
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI001C35A271 ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C35A271)

HSP 1 Score: 49.7 bits (117), Expect = 9.320e-6
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF VVP+ GTL P+ ++ V +TAY D  G+Y+D + C
Sbjct:  392 GKGAAFFVVPDTGTLGPFETQTVDVTAYTDMWGEYRDHLVC 432
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: UPI0010549D29 (deleted in lung and esophageal cancer protein 1 isoform X1 n=2 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010549D29)

HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAFLV P  GTL P+ ++ V +TAYND  G+Y+D + C
Sbjct: 1141 GKGAAFLVQPPTGTLGPFQTQIVDVTAYNDLWGEYRDHLIC 1181
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: A0A4W6DBC8_LATCA (DLEC1 cilia and flagella associated protein n=3 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6DBC8_LATCA)

HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF V+P  GTL P+ ++ V +TAY D  G+Y+DR+ C
Sbjct:  885 GKGAAFYVLPNTGTLGPFETQTVDVTAYTDMWGEYRDRLIC 925
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BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Match: A0A3Q3IVW4_MONAL (DLEC1 cilia and flagella associated protein n=2 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3IVW4_MONAL)

HSP 1 Score: 48.5 bits (114), Expect = 2.380e-5
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 1 
Query:    1 GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC 123
            G GAAF V+P  GTL P+ ++ V +TAY D  G+YKD + C
Sbjct: 1128 GKGAAFFVLPNTGTLGPFETQTVDVTAYTDIWGEYKDHLIC 1168
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1014.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
UPI001FB626C31.940e-653.66deleted in lung and esophageal cancer protein 1 is... [more]
UPI00094F36423.630e-653.66deleted in lung and esophageal cancer protein 1 is... [more]
UPI000497D68B4.970e-651.22deleted in lung and esophageal cancer protein 1 n=... [more]
UPI001CD82A8C6.800e-653.66deleted in lung and esophageal cancer protein 1 is... [more]
UPI00188627C96.800e-653.85deleted in lung and esophageal cancer protein 1 is... [more]
UPI00189D84799.300e-651.22deleted in lung and esophageal cancer protein 1 n=... [more]
UPI001C35A2719.320e-651.22(large yellow croaker) hypothetical protein n=1 Ta... [more]
UPI0010549D291.740e-553.66deleted in lung and esophageal cancer protein 1 is... [more]
A0A4W6DBC8_LATCA1.740e-551.22DLEC1 cilia and flagella associated protein n=3 Ta... [more]
A0A3Q3IVW4_MONAL2.380e-551.22DLEC1 cilia and flagella associated protein n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1014contigD-mesarthrocarpus_Contig1014:8678..8800 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G9C3
Preferred nameDLEC1
Model size123
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008285,GO:0042127,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065007
Exons1
Evalue2.6e-08
EggNOG OGs28IDE@1|root,2QQQ5@2759|Eukaryota
Descriptionnegative regulation of cell proliferation
Cds size123
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789158.1422489-CDS-D-mesarthrocarpus_Contig1014:8677..88001680789158.1422489-CDS-D-mesarthrocarpus_Contig1014:8677..8800Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1014 8678..8800 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1014.1.1prot_D-mesarthrocarpus_Contig1014.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1014 8678..8800 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1014.1.1

>prot_D-mesarthrocarpus_Contig1014.1.1 ID=prot_D-mesarthrocarpus_Contig1014.1.1|Name=mRNA_D-mesarthrocarpus_Contig1014.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=41bp
GHGAAFLVVPEAGTLPPWGSKEVKITAYNDTPGDYKDRVEC
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mRNA from alignment at D-mesarthrocarpus_Contig1014:8678..8800-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1014.1.1 ID=mRNA_D-mesarthrocarpus_Contig1014.1.1|Name=mRNA_D-mesarthrocarpus_Contig1014.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=123bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1014:8678..8800- (Discosporangium mesarthrocarpum MT17_79)
GGGCATGGAGCGGCATTCCTAGTCGTTCCAGAAGCAGGCACACTGCCCCC
GTGGGGTAGTAAGGAGGTGAAGATCACTGCGTACAACGACACTCCGGGGG
ATTACAAGGACAGGGTCGAGTGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1014:8678..8800-

>mRNA_D-mesarthrocarpus_Contig1014.1.1 ID=mRNA_D-mesarthrocarpus_Contig1014.1.1|Name=mRNA_D-mesarthrocarpus_Contig1014.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=123bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1014:8678..8800- (Discosporangium mesarthrocarpum MT17_79)
GGGCATGGAGCGGCATTCCTAGTCGTTCCAGAAGCAGGCACACTGCCCCC
GTGGGGTAGTAAGGAGGTGAAGATCACTGCGTACAACGACACTCCGGGGG
ATTACAAGGACAGGGTCGAGTGC
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