Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10133.2.1 vs. uniprot
Match:
A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)
HSP 1 Score: 78.2 bits (191), Expect = 1.500e-15
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 4 KFHEALVLRHLRASSLPMRLWGWEQVQEIIHSSHQDRWQPKAYLVSVRGLQ 156
+FH LVLRHLRASSLPMRLWGWEQ +++I+ SH+ RW KAYLV G +
Sbjct: 277 RFHSELVLRHLRASSLPMRLWGWEQTEDLINHSHRHRWHAKAYLVEGAGTK 327
BLAST of mRNA_D-mesarthrocarpus_Contig10133.2.1 vs. uniprot
Match:
D7G2G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G5_ECTSI)
HSP 1 Score: 73.6 bits (179), Expect = 6.290e-14
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 1
Query: 4 KFHEALVLRHLRASSLPMRLWGWEQVQEIIHSSHQDRWQPKAYL 135
+FH LVLRHLRASSLPMRLWGWEQ +++I+ SH+ RW K YL
Sbjct: 315 RFHSELVLRHLRASSLPMRLWGWEQTEDLINHSHRHRWNAKVYL 358
BLAST of mRNA_D-mesarthrocarpus_Contig10133.2.1 vs. uniprot
Match:
A0A1Z5K2Z6_FISSO (Ubiquitin carboxyl-terminal hydrolase 9/24 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2Z6_FISSO)
HSP 1 Score: 50.4 bits (119), Expect = 9.010e-6
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 1 FKFHEALVLRHLRASSLPMRLWGWEQVQEIIHSSHQDRWQPKAYLVSVRG 150
+ F LVLR +R+ SLP++L+GWEQV ++I + R P+ YLVS G
Sbjct: 275 YAFWRDLVLRLIRSQSLPLKLFGWEQVADLIRACESHRPPPREYLVSNAG 324
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10133.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 1.50e-15 / Id = 64.71 Expect = 6.29e-14 / Id = 68.18 Expect = 9.01e-6 / Id = 46.00 Sequence A0A6H5KKZ1_9PHAE D7G2G5_ECTSI A0A1Z5K2Z6_FISSO back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Seed ortholog 2850.Phatr46079 Model size 162 Max annot lvl 2836|Bacillariophyta Hectar predicted targeting category no signal peptide or anchor Exons 1 Evalue 6.26e-05 EggNOG OGs 2CYUK@1|root,2S6IK@2759|Eukaryota,2XFZ7@2836|Bacillariophyta Ec32 ortholog description conserved unknown protein Ec32 ortholog Ec-00_005890.1 Cds size 162
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789157.9872932-CDS-D-mesarthrocarpus_Contig10133:1636..1798 1680789157.9872932-CDS-D-mesarthrocarpus_Contig10133:1636..1798 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10133 1637..1798 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10133.2.1
>prot_D-mesarthrocarpus_Contig10133.2.1 ID=prot_D-mesarthrocarpus_Contig10133.2.1|Name=mRNA_D-mesarthrocarpus_Contig10133.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=54bp
FKFHEALVLRHLRASSLPMRLWGWEQVQEIIHSSHQDRWQPKAYLVSVRG back to top mRNA from alignment at D-mesarthrocarpus_Contig10133:1637..1798-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10133.2.1 ID=mRNA_D-mesarthrocarpus_Contig10133.2.1|Name=mRNA_D-mesarthrocarpus_Contig10133.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=162bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10133:1637..1798- (Discosporangium mesarthrocarpum MT17_79)TTTAAGTTTCACGAGGCATTGGTTTTGCGCCACCTCCGAGCGTCCTCGCT
GCCGATGCGGCTCTGGGGCTGGGAGCAGGTGCAGGAGATCATCCACAGCA
GTCACCAGGACCGTTGGCAACCCAAGGCGTACCTGGTGAGTGTCAGAGGG
CTGCAGGGTTAG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10133:1637..1798-
>mRNA_D-mesarthrocarpus_Contig10133.2.1 ID=mRNA_D-mesarthrocarpus_Contig10133.2.1|Name=mRNA_D-mesarthrocarpus_Contig10133.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=162bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10133:1637..1798- (Discosporangium mesarthrocarpum MT17_79) back to top