mRNA_D-mesarthrocarpus_Contig1012.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1012.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig1012.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1012.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1012contigD-mesarthrocarpus_Contig1012:1190..5021 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3456
Hectar predicted targeting categoryother localisation
Exons3
Cds size2535
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789157.1339998-UTR-D-mesarthrocarpus_Contig1012:1189..12231680789157.1339998-UTR-D-mesarthrocarpus_Contig1012:1189..1223Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1012 1190..1223 +
1680789157.184277-UTR-D-mesarthrocarpus_Contig1012:4134..50211680789157.184277-UTR-D-mesarthrocarpus_Contig1012:4134..5021Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1012 4135..5021 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789157.1468625-CDS-D-mesarthrocarpus_Contig1012:1223..25131680789157.1468625-CDS-D-mesarthrocarpus_Contig1012:1223..2513Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1012 1224..2513 +
1680789157.1552007-CDS-D-mesarthrocarpus_Contig1012:2860..40361680789157.1552007-CDS-D-mesarthrocarpus_Contig1012:2860..4036Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1012 2861..4036 +
1680789157.16508-CDS-D-mesarthrocarpus_Contig1012:4065..41341680789157.16508-CDS-D-mesarthrocarpus_Contig1012:4065..4134Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1012 4066..4134 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1012.2.1prot_D-mesarthrocarpus_Contig1012.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1012 1224..4134 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1012.2.1

>prot_D-mesarthrocarpus_Contig1012.2.1 ID=prot_D-mesarthrocarpus_Contig1012.2.1|Name=mRNA_D-mesarthrocarpus_Contig1012.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=845bp
MDRNCGWDRDRDRGQGWDRDRDRGQVWDRDRDRGQAWDRDRHRGQAWDRD
RYRGQAWDRDRYRGQAWDRDRDRDRDRDQQWGRDREEGGRDRDKERNRDR
EEKGRERDRDRDRDRDRDRDRDRDREGDRSRGRGTNWDQEVEHGWETDNC
GMDWEGREVKDGRVAMVQESNGAGGYRGRQDAWLEDKVRDSSQERRSLEG
DRVQGDRFRQERGRDQHPPSDRAEPRYLKRDRPFDGHRGTPLKSPDRKKL
VRDSGWGRGEREDFPVPIPRAAESGIGETQVKHGTGVPAESGVHGQYALG
GDVPERHSLAKAQCLDIPPEGGADRPYPPACLEGGKGPTLAHGSGSSGGG
GSGDHGVQVLSGGENEVPRPRKLLAEPRCATEGFSPQALGEQKGKVYLLL
RGTHPAVYRDRIRELLHQHDAVGGNIDILKRFVFISMASETEAKSLAKKL
DDSKRTPLVCGEEMTMSPAAPFTPEKGKVGLLSARVVSQEEYARIMGMSK
WAEYAGQMRNALRIHEMMSAGWEVTDLCPFFSYVGSCIRGKGCPLRHDPY
AAIPEVKDPAPRGAGATRGTLGGNALHRGAVTAGVGDRREGGVTPPFLRT
GSSLDPLRRGYNPEHPRHAHLERLDRASAGSIIEDFSMRERMYQPRFPSL
RVLPPPGDPDLEVRRVRARVADPPRVPSTAGGPSRYGSHAHIVMAESKDY
ERYQREPTGGGLGIYSSSVDGRGFHHPEAARDGYGDPRYSYGGYTRRGYD
RAARAESSTGVSYMGGVCGMDGYDGYRGRIYNGCRASRVEIRPPLRDYSV
REEMSRGSYRGDGYHPRYGDDYRWWRRWQQQRQRQRQWQQQRRQ*
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mRNA from alignment at D-mesarthrocarpus_Contig1012:1190..5021+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1012.2.1 ID=mRNA_D-mesarthrocarpus_Contig1012.2.1|Name=mRNA_D-mesarthrocarpus_Contig1012.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3832bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1012:1190..5021+ (Discosporangium mesarthrocarpum MT17_79)
GGAAAGGGACAGAGATCATCACAGGGAGAGGGACATGGACAGGAATTGTG
GCTGGGACAGGGATAGGGATAGGGGCCAAGGTTGGGACAGGGACAGGGAT
AGGGGCCAAGTCTGGGACAGGGATAGGGATAGGGGCCAAGCCTGGGACAG
GGATAGGCACAGGGGCCAAGCCTGGGACAGGGATAGGTACAGGGGCCAAG
CCTGGGACAGGGATAGGTACAGGGGCCAAGCCTGGGACAGGGACAGGGAC
AGGGACAGGGACAGAGATCAACAATGGGGGAGGGACAGAGAGGAGGGAGG
TAGAGACAGGGACAAGGAAAGAAATAGGGACAGAGAGGAAAAGGGAAGAG
AAAGGGACAGGGACAGAGACAGGGATAGAGACAGGGACAGGGATAGGGAC
AGGGACAGGGAAGGAGACAGATCCAGGGGTAGGGGAACAAACTGGGACCA
GGAGGTGGAGCATGGCTGGGAGACGGACAACTGTGGCATGGACTGGGAAG
GCAGAGAAGTCAAAGATGGTAGGGTTGCCATGGTCCAAGAATCGAACGGG
GCGGGTGGCTACCGCGGGAGGCAAGATGCATGGCTGGAGGACAAGGTGCG
GGACAGCTCACAGGAGAGAAGGAGCCTTGAGGGGGATAGGGTGCAAGGGG
ATAGATTCCGCCAGGAGAGGGGCAGGGACCAGCACCCACCCAGTGACCGT
GCCGAGCCAAGGTACCTGAAGAGGGACAGGCCTTTTGACGGGCACCGTGG
CACCCCCCTCAAGTCTCCCGATCGAAAGAAGCTGGTGAGAGACAGCGGCT
GGGGGAGAGGGGAGAGGGAGGACTTCCCTGTGCCCATCCCGAGGGCCGCT
GAGAGTGGCATTGGTGAGACTCAGGTCAAGCATGGCACGGGTGTCCCAGC
AGAAAGTGGTGTCCACGGACAGTATGCCCTTGGTGGAGACGTCCCAGAGA
GGCACTCCTTGGCCAAAGCCCAGTGCTTGGACATTCCCCCGGAGGGCGGC
GCTGACAGGCCATATCCCCCTGCTTGCCTGGAGGGTGGGAAGGGCCCCAC
TCTTGCCCATGGGAGCGGCAGCAGCGGTGGTGGTGGTAGTGGTGATCATG
GTGTCCAAGTGTTGAGTGGTGGGGAGAATGAGGTTCCCCGCCCCCGGAAA
TTGCTTGCAGAACCCAGGTGTGCAACAGAAGGCTTCTCTCCTCAAGCCCT
GGGAGAACAGAAGGGGAAGGTGTATCTGCTGCTTCGAGGCACACACCCTG
CTGTCTACAGAGACAGGATTCGGGAGCTCTTGCACCAGCATGATGCTGTC
GGGGGCAACATAGACATCCTCAAGGTGAGCTGAAGGTCTGGCGGGGACCC
GTTTGCTTTGTTTCTTTCACTTCTGAGAGTTGCATCCTGCATTAATGTGG
AGAGCCCTGTGGTGGTTTGGTTTGGCTGCCCCAGCAGCAGCTGTGAATGT
CCCTATACCGATATTCCCCCCCTCTCCCCTCTCCCCTTCACCTGGGCATG
CAACATCAAGATGCTTTTTGTAATACCCATTGAACTGCGGCTGGTCTGTT
GACACGCATACACCCCCCCCTCACTAATCCCCCCCCCACTCCCCACCCCA
AAATCCTCCTCACCGGTTATTTCTTGGGAAAAACAAACAACCAAAAACAA
TGACGTCAACAATAATGAAAGCGCTTTGTGTTCATCAGCATGGCATCGGA
GACAGAGGCAAAGTCACTTGCAAAGAAGCTGGACGACTCCAAGAGAACCC
CCCTTGTGTGTGGGGAGGAGATGACCATGAGCCCCGCGGCCCCCTTCACC
CCTGAGAAGGGCAAGGTTGGGCTACTGTCAGCGCGCGTTGTGTCCCAGGA
GGAGTATGCCCGGATCATGGGCATGTCCAAGTGGGCGGAGTACGCCGGTC
AGATGCGGAATGCCCTGCGCATCCACGAGATGATGTCTGCCGGGTGGGAG
GTCACCGACTTGTGCCCATTCTTCTCTTACGTAGGCTCCTGCATAAGGGG
GAAGGGGTGCCCCCTCCGCCACGACCCCTATGCCGCCATCCCTGAGGTCA
AGGACCCGGCGCCCAGGGGGGCGGGCGCCACCAGGGGCACCCTGGGAGGC
AATGCCCTCCACAGGGGTGCTGTAACTGCCGGGGTTGGAGACAGGAGGGA
AGGTGGTGTCACCCCTCCATTCCTCCGCACCGGGTCCTCTCTAGACCCAT
TGAGGAGGGGCTACAACCCCGAACACCCCCGACATGCCCACTTGGAGCGT
TTGGACAGGGCCAGCGCCGGCAGCATAATCGAGGATTTCAGCATGCGGGA
GAGGATGTACCAGCCACGGTTCCCATCCCTGCGAGTCCTTCCTCCGCCTG
GGGATCCCGACCTCGAGGTTAGGCGCGTTAGGGCCAGGGTTGCAGATCCT
CCCAGGGTGCCATCAACTGCTGGTGGCCCCAGCAGGTACGGCAGCCATGC
CCACATCGTCATGGCTGAGAGCAAAGATTATGAGAGGTATCAAAGAGAAC
CAACTGGTGGGGGGCTCGGGATCTACAGCAGCAGTGTCGATGGGAGGGGT
TTCCACCACCCCGAGGCAGCCAGGGATGGCTACGGCGATCCCAGGTACAG
CTATGGTGGCTACACAAGGCGAGGTTACGACAGGGCTGCCCGGGCTGAGA
GCAGCACGGGGGTTAGCTACATGGGCGGCGTCTGTGGCATGGATGGCTAC
GACGGCTACAGAGGCAGGATCTACAATGGCTGCCGTGCCAGCAGGGTAGA
GATCCGCCCTCCCCTTAGAGACTATAGTGTTAGAGAGGAGATGAGCAGGG
GGAGCTACAGAGGGGATGGCTACCACCCCAGGTATGGTGATGATTATGCG
TTCAGCGGTGGAGCAGCAAGAGGCAGCGGTGGTGGCGGCGGTGGCAGCAA
CAACGGCAACGGCAACGGCAGTGGCAGCAGCAGCGGCGGCAATAATACCG
GCAGTGGCAGTGGGAGTTGTGCTATGTTTCCGATGGAAGACTCACGAGAA
AGGCACGGCCCTCATGATCCAACCATGGAGCCCACCTTCTCTGTGACTAT
GCCTTCGCAGAACGATGTGGGCAGGGGCCCCACCTTTGCCATCACCATGC
CGACAGGGGACTCGCCCTTTGCGCAAGGCCTCCTGCCTCCTCGCTCCTCC
CCCCGACCTGGGTCCAGAGGCAGCAACAAGAGGGTGCTGTGACCTCGATT
TCGATCAGGACAGCATCACCAGAAATACATGACCCCCACGCACAGAGTGA
CCAGGGGATGGTGTGCGCGTTGGTTCCTTTCAGTCAAGTGATGTGGAATG
ATGGTCTAGGCAAAGAAAGGTGGGTATTGTTCAGGGTAAGTAGCGAGGGA
GCTGTGGTAGAGGAGGGCATCCAAATGGGTGGGAGAGGGCTGTAGAATAA
GACACTTGTCAACTGGCCCGACTGAGTGCTTGACCTTAAGTGACACTTCT
GCTTCCTCAAGGAGCAGATCCATGCATCATGGCGATCATGTTTCTGGATC
CTGCACAGGAAGAGATGTCCAAGATCTTGGTGTCTCTCACGTTGGATGCA
CTCCAATGGCAAATATTTGTGGACGGAGATAATTGACTCCCTTGACCCTC
TGGAAGAGGTAAAGCCTGACGGTTTTAAGGGATAGCAAGACATGGTCCAA
GGAAGGATTCCCTGCGCTATTCTTCCTACTTTTGGTGTAATGCATGCCAG
GCAATGATTTCTGCGTGAGGGGAGGACACTGTGGAGTGGGTCAGGATGTG
CTTTTGAGCAAACGTCACCTCTTGGAGACGGGAGGGATAATGGCAGCGCT
ACATAAAGCCTTGTACCAGGTTTATAGGGACC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1012:1190..5021+

>mRNA_D-mesarthrocarpus_Contig1012.2.1 ID=mRNA_D-mesarthrocarpus_Contig1012.2.1|Name=mRNA_D-mesarthrocarpus_Contig1012.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2535bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1012:1190..5021+ (Discosporangium mesarthrocarpum MT17_79)
ATGGACAGGAATTGTGGCTGGGACAGGGATAGGGATAGGGGCCAAGGTTG
GGACAGGGACAGGGATAGGGGCCAAGTCTGGGACAGGGATAGGGATAGGG
GCCAAGCCTGGGACAGGGATAGGCACAGGGGCCAAGCCTGGGACAGGGAT
AGGTACAGGGGCCAAGCCTGGGACAGGGATAGGTACAGGGGCCAAGCCTG
GGACAGGGACAGGGACAGGGACAGGGACAGAGATCAACAATGGGGGAGGG
ACAGAGAGGAGGGAGGTAGAGACAGGGACAAGGAAAGAAATAGGGACAGA
GAGGAAAAGGGAAGAGAAAGGGACAGGGACAGAGACAGGGATAGAGACAG
GGACAGGGATAGGGACAGGGACAGGGAAGGAGACAGATCCAGGGGTAGGG
GAACAAACTGGGACCAGGAGGTGGAGCATGGCTGGGAGACGGACAACTGT
GGCATGGACTGGGAAGGCAGAGAAGTCAAAGATGGTAGGGTTGCCATGGT
CCAAGAATCGAACGGGGCGGGTGGCTACCGCGGGAGGCAAGATGCATGGC
TGGAGGACAAGGTGCGGGACAGCTCACAGGAGAGAAGGAGCCTTGAGGGG
GATAGGGTGCAAGGGGATAGATTCCGCCAGGAGAGGGGCAGGGACCAGCA
CCCACCCAGTGACCGTGCCGAGCCAAGGTACCTGAAGAGGGACAGGCCTT
TTGACGGGCACCGTGGCACCCCCCTCAAGTCTCCCGATCGAAAGAAGCTG
GTGAGAGACAGCGGCTGGGGGAGAGGGGAGAGGGAGGACTTCCCTGTGCC
CATCCCGAGGGCCGCTGAGAGTGGCATTGGTGAGACTCAGGTCAAGCATG
GCACGGGTGTCCCAGCAGAAAGTGGTGTCCACGGACAGTATGCCCTTGGT
GGAGACGTCCCAGAGAGGCACTCCTTGGCCAAAGCCCAGTGCTTGGACAT
TCCCCCGGAGGGCGGCGCTGACAGGCCATATCCCCCTGCTTGCCTGGAGG
GTGGGAAGGGCCCCACTCTTGCCCATGGGAGCGGCAGCAGCGGTGGTGGT
GGTAGTGGTGATCATGGTGTCCAAGTGTTGAGTGGTGGGGAGAATGAGGT
TCCCCGCCCCCGGAAATTGCTTGCAGAACCCAGGTGTGCAACAGAAGGCT
TCTCTCCTCAAGCCCTGGGAGAACAGAAGGGGAAGGTGTATCTGCTGCTT
CGAGGCACACACCCTGCTGTCTACAGAGACAGGATTCGGGAGCTCTTGCA
CCAGCATGATGCTGTCGGGGGCAACATAGACATCCTCAAGCGCTTTGTGT
TCATCAGCATGGCATCGGAGACAGAGGCAAAGTCACTTGCAAAGAAGCTG
GACGACTCCAAGAGAACCCCCCTTGTGTGTGGGGAGGAGATGACCATGAG
CCCCGCGGCCCCCTTCACCCCTGAGAAGGGCAAGGTTGGGCTACTGTCAG
CGCGCGTTGTGTCCCAGGAGGAGTATGCCCGGATCATGGGCATGTCCAAG
TGGGCGGAGTACGCCGGTCAGATGCGGAATGCCCTGCGCATCCACGAGAT
GATGTCTGCCGGGTGGGAGGTCACCGACTTGTGCCCATTCTTCTCTTACG
TAGGCTCCTGCATAAGGGGGAAGGGGTGCCCCCTCCGCCACGACCCCTAT
GCCGCCATCCCTGAGGTCAAGGACCCGGCGCCCAGGGGGGCGGGCGCCAC
CAGGGGCACCCTGGGAGGCAATGCCCTCCACAGGGGTGCTGTAACTGCCG
GGGTTGGAGACAGGAGGGAAGGTGGTGTCACCCCTCCATTCCTCCGCACC
GGGTCCTCTCTAGACCCATTGAGGAGGGGCTACAACCCCGAACACCCCCG
ACATGCCCACTTGGAGCGTTTGGACAGGGCCAGCGCCGGCAGCATAATCG
AGGATTTCAGCATGCGGGAGAGGATGTACCAGCCACGGTTCCCATCCCTG
CGAGTCCTTCCTCCGCCTGGGGATCCCGACCTCGAGGTTAGGCGCGTTAG
GGCCAGGGTTGCAGATCCTCCCAGGGTGCCATCAACTGCTGGTGGCCCCA
GCAGGTACGGCAGCCATGCCCACATCGTCATGGCTGAGAGCAAAGATTAT
GAGAGGTATCAAAGAGAACCAACTGGTGGGGGGCTCGGGATCTACAGCAG
CAGTGTCGATGGGAGGGGTTTCCACCACCCCGAGGCAGCCAGGGATGGCT
ACGGCGATCCCAGGTACAGCTATGGTGGCTACACAAGGCGAGGTTACGAC
AGGGCTGCCCGGGCTGAGAGCAGCACGGGGGTTAGCTACATGGGCGGCGT
CTGTGGCATGGATGGCTACGACGGCTACAGAGGCAGGATCTACAATGGCT
GCCGTGCCAGCAGGGTAGAGATCCGCCCTCCCCTTAGAGACTATAGTGTT
AGAGAGGAGATGAGCAGGGGGAGCTACAGAGGGGATGGCTACCACCCCAG
GTATGGTGATGATTATCGGTGGTGGCGGCGGTGGCAGCAACAACGGCAAC
GGCAACGGCAGTGGCAGCAGCAGCGGCGGCAATAA
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