prot_D-mesarthrocarpus_Contig1012.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-mesarthrocarpus_Contig1012.2.1
Unique Name	prot_D-mesarthrocarpus_Contig1012.2.1
Type	polypeptide
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length	845

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig1012.2.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig1012.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..364
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 522..550 score: 11.760412

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig1012	contig	D-mesarthrocarpus_Contig1012:1224..4134 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig1012.2.1	mRNA_D-mesarthrocarpus_Contig1012.2.1	Discosporangium mesarthrocarpum MT17_79	mRNA	D-mesarthrocarpus_Contig1012 1190..5021 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1012.2.1 ID=prot_D-mesarthrocarpus_Contig1012.2.1|Name=mRNA_D-mesarthrocarpus_Contig1012.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=845bp
MDRNCGWDRDRDRGQGWDRDRDRGQVWDRDRDRGQAWDRDRHRGQAWDRD
RYRGQAWDRDRYRGQAWDRDRDRDRDRDQQWGRDREEGGRDRDKERNRDR
EEKGRERDRDRDRDRDRDRDRDRDREGDRSRGRGTNWDQEVEHGWETDNC
GMDWEGREVKDGRVAMVQESNGAGGYRGRQDAWLEDKVRDSSQERRSLEG
DRVQGDRFRQERGRDQHPPSDRAEPRYLKRDRPFDGHRGTPLKSPDRKKL
VRDSGWGRGEREDFPVPIPRAAESGIGETQVKHGTGVPAESGVHGQYALG
GDVPERHSLAKAQCLDIPPEGGADRPYPPACLEGGKGPTLAHGSGSSGGG
GSGDHGVQVLSGGENEVPRPRKLLAEPRCATEGFSPQALGEQKGKVYLLL
RGTHPAVYRDRIRELLHQHDAVGGNIDILKRFVFISMASETEAKSLAKKL
DDSKRTPLVCGEEMTMSPAAPFTPEKGKVGLLSARVVSQEEYARIMGMSK
WAEYAGQMRNALRIHEMMSAGWEVTDLCPFFSYVGSCIRGKGCPLRHDPY
AAIPEVKDPAPRGAGATRGTLGGNALHRGAVTAGVGDRREGGVTPPFLRT
GSSLDPLRRGYNPEHPRHAHLERLDRASAGSIIEDFSMRERMYQPRFPSL
RVLPPPGDPDLEVRRVRARVADPPRVPSTAGGPSRYGSHAHIVMAESKDY
ERYQREPTGGGLGIYSSSVDGRGFHHPEAARDGYGDPRYSYGGYTRRGYD
RAARAESSTGVSYMGGVCGMDGYDGYRGRIYNGCRASRVEIRPPLRDYSV
REEMSRGSYRGDGYHPRYGDDYRWWRRWQQQRQRQRQWQQQRRQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH