Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match:
A0A6H5KMF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF9_9PHAE)
HSP 1 Score: 173 bits (438), Expect = 2.290e-45
Identity = 120/255 (47.06%), Postives = 157/255 (61.57%), Query Frame = 2
Query: 8 SISGMQGHLDAHMSASAYSSHADRKAQEEEKEAMRTRHSXXXXXXXXXXXXXMQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGLTIAPEGMDRRSSGPSVSPSLQGYNGTRAEGADGMGIGVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQRQEHQXXXXQAHRPPHGPRG 772
S++G++G LDAH++ SA SS ADR ++E+ A+ +H +QQ+L+EKD E K E FKKQLN+VQLELLNNRQH+INTE+QWRKR+EE E RE E+ RM+ ++D +LA KS+ + A+AA+ G+ S + +A RR D K+RSL+L++EE+KKESR LR+RNQELERVVEALRKTIMRQAELSSQRQ+ Q P H RG
Sbjct: 194 SVAGLRGALDAHVAVSAESSAADRHMHQQERAALIDQHEKFVRDLREQHDQTIQQILMEKDVENSKCTESFKKQLNEVQLELLNNRQHMINTEAQWRKRLEEQEQRESGEMMRMREAFQD----ELASVKSDLSTAHAAMGGLGS-MGMAD---GRRGGAXXXXXXXXXXXXXXXXXLXXXXXXXXADHKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQGTGPGQRPPSHAFRG 440
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match:
D7FTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA0_ECTSI)
HSP 1 Score: 166 bits (419), Expect = 4.180e-44
Identity = 117/255 (45.88%), Postives = 153/255 (60.00%), Query Frame = 2
Query: 8 SISGMQGHLDAHMSASAYSSHADRKAQEEEKEAMRTRHSXXXXXXXXXXXXXMQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGLTIAPEGMDRRSSGPSVSPSLQGYNGTRAEGADGMGIGVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQRQEHQXXXXQAHRPPHGPRG 772
S++G++G LDAH++ SA SS ADR ++E+ A+ + +QQ+L+EKD E K E FKKQLN+VQLELLNNRQH+INTE+QWRKR+EE E RE E+ RM+ ++D +LA KS+ + A+AA+ G+ G +G D K+RSL+L++EE+KKESR LR+RNQELERVVEALRKTIMRQAELSSQRQ+ Q P H RG
Sbjct: 243 SVAGLRGALDAHVAVSAESSAADRHMHQQERAALVDQQEKFVRDLREQHDQTIQQILMEKDVENSKCTESFKKQLNEVQLELLNNRQHMINTEAQWRKRLEEQEQRESGEMMRMREAFQD----ELASVKSDLSTAHAAMGGL--GAXXMADGXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXDHKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQGTGPGQRPPSHAFRG 489
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match:
A0A835YKF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF1_9STRA)
HSP 1 Score: 162 bits (410), Expect = 2.640e-42
Identity = 101/184 (54.89%), Postives = 129/184 (70.11%), Query Frame = 2
Query: 164 MQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGLTIAPEGMDRRSSGPSVSPSLQGYNGTRAEGADGMGIGVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQR 715
+QQ++ EKD E+HK AE FKK LND QLELLNNRQH+INTE+QWR+R+EEVE RE+ E+AR+K DHY LARAKSE AAA LEG+ S + + + +L G + A G +G + + K+RSLA++LEES+KE++ LRDR E ER++EALRKTIMRQAELSSQR
Sbjct: 120 LQQVIQEKDAEHHKAAEMFKKSLNDSQLELLNNRQHMINTEAQWRRRLEEVEQRERAEVARIK----DHYEGLLARAKSETAAA---LEGLGSAVAAG-----------AAAGNLDGVHSGGA-GGEGTQVSAADSEKIRSLAVLLEESRKEAKWLRDRTSESERIIEALRKTIMRQAELSSQR 284
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match:
A0A836CGJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ9_9STRA)
HSP 1 Score: 128 bits (322), Expect = 5.080e-30
Identity = 111/286 (38.81%), Postives = 136/286 (47.55%), Query Frame = 2
Query: 164 MQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGL----------TIAPEGMDRRSS-----------------------------------------------------------------GPSVSPSLQ------------------GY---NGTRAEGADGMGI------GVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQR 715
+QQ++ EKD EYHK E KK LNDVQLELLNNRQH+INTE+QWR+R+E+VE RE+ ELAR K +H+ LARAK E AAA LEG+ L A EG S+ GP V+P + GY +G E +G G+ G+ KLRSLA++LEES+KE+R LRDRN E ERV+EALRKTIMRQAEL+SQR
Sbjct: 76 LQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTK----EHFEALLARAKGETAAA---LEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQR 354
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 2.29e-45 / Id = 47.06 Expect = 4.18e-44 / Id = 45.88 Expect = 2.64e-42 / Id = 54.89 Expect = 5.08e-30 / Id = 38.81 Sequence A0A6H5KMF9_9PHAE D7FTA0_ECTSI A0A835YKF1_9STRA A0A836CGJ9_9STRA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 2880.D7FTA0 Model size 811 Max annot lvl 2759|Eukaryota Hectar predicted targeting category other localisation Exons 6 Evalue 5.88e-43 EggNOG OGs 2BZB3@1|root,2SGA8@2759|Eukaryota Cds size 792
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789155.6460402-CDS-D-mesarthrocarpus_Contig1010:19658..19726 1680789155.6460402-CDS-D-mesarthrocarpus_Contig1010:19658..19726 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1010 19659..19726 - 1680789155.6642609-CDS-D-mesarthrocarpus_Contig1010:20455..20582 1680789155.6642609-CDS-D-mesarthrocarpus_Contig1010:20455..20582 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1010 20456..20582 - 1680789155.682073-CDS-D-mesarthrocarpus_Contig1010:20922..21148 1680789155.682073-CDS-D-mesarthrocarpus_Contig1010:20922..21148 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1010 20923..21148 - 1680789155.6953118-CDS-D-mesarthrocarpus_Contig1010:21595..21798 1680789155.6953118-CDS-D-mesarthrocarpus_Contig1010:21595..21798 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1010 21596..21798 - 1680789155.718724-CDS-D-mesarthrocarpus_Contig1010:22471..22531 1680789155.718724-CDS-D-mesarthrocarpus_Contig1010:22471..22531 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1010 22472..22531 - 1680789155.7297492-CDS-D-mesarthrocarpus_Contig1010:23390..23498 1680789155.7297492-CDS-D-mesarthrocarpus_Contig1010:23390..23498 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig1010 23391..23498 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789155.7430167-UTR-D-mesarthrocarpus_Contig1010:23498..23517 1680789155.7430167-UTR-D-mesarthrocarpus_Contig1010:23498..23517 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig1010 23499..23517 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1010.7.1
>prot_D-mesarthrocarpus_Contig1010.7.1 ID=prot_D-mesarthrocarpus_Contig1010.7.1|Name=mRNA_D-mesarthrocarpus_Contig1010.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=264bp
MQGHLDAHMSASAYSSHADRKAQEEEKEAMRTRHSKELETLREQHDQAMQ back to top mRNA from alignment at D-mesarthrocarpus_Contig1010:19659..23517-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1010.7.1 ID=mRNA_D-mesarthrocarpus_Contig1010.7.1|Name=mRNA_D-mesarthrocarpus_Contig1010.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3859bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1010:19659..23517- (Discosporangium mesarthrocarpum MT17_79)AGTGAAGTCCATCTCGGGT ATGCAGGGGCACTTGGATGCCCACATGAGTG
CCTCGGCATACAGCAGCCATGCTGACCGGAAAGCGCAAGAAGAAGAGAAG
GAGGCCATGAGGACTAGGCACAGCAAG GTGAGGCATAGATATAGCAAGAT
ATCAAGGTGAGGGTCAGGCATAGCAAGGTGAGGAAATGCCATCAGGGCCA
GACATAGTCAAGGTGATTTTACTAAAATTAGAGCCACGGTTGTCTAGGTT
TGGCTCGGTTTTCTCTTGCTTTGGCTTGGTTTGGTTTGGTTTGGTTACAG
GTATGCTAGTGTAAGGACTGCAATCAATGAGATGAAACAAACCAAGGCAC
GGTTAGTATAGTACAGCATTGAACAGCATAGAAGTTCAATCTACCACAAT
AAGACTGCAGTACTCCTGTACTTTTACAGACTGTAGGGTTAGGGTTAGGG
TTGCAACTCCTTCTAAGCACTTCATAGTGCAGTGTACACTGCAGCAGCAG
ATTGATTTGTTAATAGTTTATTTACTTACACCGATTTACTTACACCTGTT
GTGTTCCTTTGAAGTGTTTTTATTGCAGTGGGTCTGGAGCCCAAACTCAA
CTACACGGTTAATTCACCGTCACAGCCTGTACTTCAGTGCGGTTGCCCAC
TGTGCTTCTTTGCTGACCATTTTCGAAGCTCATCTTATCCCCATCCCGAC
CCCCAGCAAAACCCTAACCCTGTCTCCACATTGTCCCACATTCTTAGTTA
GCCCCAACCTTAATGGCACTGTATAACTCTTGTGATTATGACAGTAAGTG
ATCTCTAGCCCTAACCCTAGCCCTAACCCTAGCCCTAACCCTAACCCTAA
CCCTAATGACCCTGACCTTAACCCCAACCCTAACCCTAATGACCCTAACC
CTAATGACCCTGACCTTAACCCCAACCCTAGTCCTAACCCTAACCCTAAC
CCTAACCCTAACCCTAATGACCCTAACCCTATACAGGAGCTGGAGACCCT
TCGTGAGCAGCATGACCAGGCCATGCAGCAGTTGCTTCTGGAGAAG GTGA
GTTTTGGACTGGTGAAGGCAGGCGTGTTCTTCTGGGGGATGGTGGCCAAG
GGGCAATTAGTGTTAGGGCTAGGGTTAGGATCATGCTGTCAGTGTTTTTT
GGGGGGAAATCTTTCATTCACATCGAAGGGCTAGGGTGAGGCTTGGCACC
CTGCGACTTGAGATTTCTAGATCAATCTACAACCTACAAACTATATGCTC
GAGGTCATTTTACAATCCACAATACAGTCTTACAATCTTACATCTGCAAC
CTGCAGTCTTATAATTTACTCAACCTCAGAGACATATCATGCATGACCAC
TACACTTGTGTTGTACGTGATAAAAGTCAGTAGCAATCACTTCTTTTCTA
TCGATACTTTACTGTTACTGTCAGTTAGTTTTGGCAAGAAATAAGCAAGA
ACACTTGACCAAGATTTGCGACAAAGGTGTTTTAAGTTAAACTAATTTGG
TATGACAAGGTTCTTGGCTTGATGAAGAGTGGCAAAGTTTTTTTTTGTTT
TGGCTCGTGCAGCTGGAAGTATCGGGTTGGTAGGGATTCAGTGATAACTT
CAATTTCGGATATTTTTTTGAATGATGCAAAATGATCAAAATTATTGATG
ATACATCTCAAACGAAAAATAATAATAATAATAATAATAATAATGATGAT
GATCATGGCACTACTGAAGGATGGGGAGTACCACAAGATGGCAGAGGGCT
TCAAGAAGCAGCTCAATGACGTACAGCTGGAGCTGCTGAACAACCGGCAG
CATATCATCAACACGGAGTCGCAGTGGCGGAAGAGGGTGGAAGAGGTGGA
GACCAGGGAAAAGGTGGAGCTGGCCCGCATGAAGGGCAAATACAAAGACC
ACTACGGGGAGCAGCTGGCCAG GTGGGTGTGTCATACCCATACTTACACT
TGAATCTTCTACTTGTGGTTTCAATTTTATTTTAGCATTAATGCTTGTAC
TTACACTTACACTCACACTTGCTTGAATTTAGGGTTAAGCGGCTCAATTG
TGACAAGGGTTAAGTGGAAGTTTGCTCTTTGTTCATGTCACATGCCTTTC
TAGTCCTGCTTATACTTTGTACTTTACTGTTTTTGTAGTAATTATATAGT
TACACTTACGATACATACTGTAGTAATATTGTGTGGTATAATACCTAGGG
TTAGGGTCATGGTCTCTATGCTGATTCGATTGGAAGGGACTATTTGTAGT
ACACCAACACATGCACATACAACACATGCACAACAAACCCCGATCCTTAC
CCCTAAATCCAACCCTAACCCCAACCACAATGTTGCCCCCTGTCACACCC
CGCCCTGCCTGTGCCCCAGGGCCAAGAGCGAGGCTGCCGCTGCCAACGCC
GCCCTGGAGGGTATGAGCTCTGGGCTGACCATAGCCCCTGAGGGCATGGA
CCGTCGGTCCAGTGGCCCCAGCGTGTCCCCCAGCCTCCAAGGCTACAATG
GGACAAGGGCAGAGGGGGCAGATGGCATGGGCATAGGCGTGGGGGAAGAC
CCCAAGCTGCGGTCCCTTGCCCTCATGCTGGAGGAGTCGAAAAAG GTGAG
GTCCAGGCTGTTCTGTTGGGGGCCCCAGGCATTGGGATAGGCCCTATGGC
ACCAAGGGAAGGTTGCTTCACGCAGGGTGTCGAGAGAGAGGGGGAGGTGG
CCGTTCCTCCCCCCAATTTTTCATGAAATCAATCTGAAGTAGGGATGAAA
CTGCCGTGACTGTATTTATACTAGATGTAGTATGTATGGTACAGTAGTAT
GTAAATACCTTCAAGGTGTTGGACACTTCAAGAGCAATAGTTCCATTCAT
ATACTGAAGTTAATCACGCTTCCTGACTATGTTTTGTTTTATTGACTGTA
CTGTATGTATTATCCATATGGGTGTGGTCGTGCAGGAGTCCCGCTCACTC
CGTGATCGTAACCAGGAGTTGGAGAGAGTTGTGGAGGCATTGAGGAAGAC
TATCATGAGGCAGGCGGAGCTCTCCAGCCAGCGCCAAGAGCACCAGCACC
AGCACCAGCAAG GTACAAGACGGTTGTGGTTAGGGTTTAGGTTTGGGTAC
TGCACCTTAATTGGAGTACCTTACTAAGTGAAGAACCCTAACCCTAAGGA
TAAAGCTATGCTGCACGTGCTATATACTCCGCTCTTATGTCTGCACTAGT
ATCCGATGTTCACGGAGGTGTCTAGTGTCTGGTGTCTAATGTCTGGTGTT
TTGCTCTAGCCTTACCTAACCTTTCCTTATAATAGGCTTGGGAGTCCTTC
TGATTTATGGTTATGGTTTACCACCCTGGATCTTGAATGTACTAGTCTTG
GGAGTGCTTCTGGATTGTGTAGTAATAACCCTAACCCTAACCCTAACCCC
GAAGTACTGGTTCCTTAAAGTCGTAATCTAGAGGCACCTAAGTACTTCCA
AGTGCTTGTTTCTTCAAGTAAAGATCCTCCAGGGCTACTGAGGTACTTTT
TTTTGTTCCGGTGGAGATATTATATATTGGAGTAGGTCAAGCAATAAGAT
CTAGTACTGCACCCGGTGTACTGCAAGAATATCCTTAACCCTATTCTTTA
CCTTCACAGTGATCTTAACCTGCTCTGTGTGATCCTAATCCCAGCCTGGG
TTAGTATCAATGCAAAGCCCAAGACCTTAACAAAATCCATAACCATAACC
ATAACCCGACCCTGATTCAAGCAGCACCCTGTCCATTGCCCATGTATTAA
TTTGTAAGTGTACTTATCTACCTGCCCCTTGGTGGGATCAGCCCACCGCC
CCCCTCATGGTCCAAGGGGCAGGGGCATGCATGCTGCTCATGCCCATCAT
GTCCAGCTC back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1010:19659..23517-
>mRNA_D-mesarthrocarpus_Contig1010.7.1 ID=mRNA_D-mesarthrocarpus_Contig1010.7.1|Name=mRNA_D-mesarthrocarpus_Contig1010.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=792bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1010:19659..23517- (Discosporangium mesarthrocarpum MT17_79) back to top