prot_D-mesarthrocarpus_Contig10094.1.3 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-mesarthrocarpus_Contig10094.1.3
Unique Name	prot_D-mesarthrocarpus_Contig10094.1.3
Type	polypeptide
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length	482

Homology

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BLAST of mRNA_D-mesarthrocarpus_Contig10094.1.3 vs. uniprot
Match: D7G420_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G420_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.940e-11
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0

Query:  126 LSRSLDKRMLPRFRHIRNKNIEPSFERHKWVITTYTDQQFTKWLSGQG 173
            LSRSLDKRMLPR + +R K+IEP F  HKWV++TYTD+QFT+WL G+G
Sbjct:  350 LSRSLDKRMLPRAQQMREKDIEPRFGPHKWVVSTYTDKQFTRWLEGRG 397

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BLAST of mRNA_D-mesarthrocarpus_Contig10094.1.3 vs. uniprot
Match: A0A7J0FB30_9ERIC (GTP binding protein beta 1 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0FB30_9ERIC)

HSP 1 Score: 61.6 bits (148), Expect = 2.100e-6
Identity = 36/110 (32.73%), Postives = 60/110 (54.55%), Query Frame = 0

Query:   60 LEPKLGWIKSRLEASQEEVRLLILRFPLIFGYSTLKNLDPTVDFFFKELHGTIVEIRKAVLSCPAILSRSLDKRMLPRFRHIRNKNIEPSFERHKWVITTYTDQQF-TKW 168
            LE K+ W    L  S++E   +  R P IFGYS  +NL P +++   E+   I E++      P     SL+KR++PR  H++ +N+E S +R    +  ++D++F  KW
Sbjct:  535 LEEKI-WFLRGLGLSRDESARVCARLPAIFGYSVKRNLGPKIEYLVSEMKREIEELKVF----PQYFGFSLEKRIVPRHLHLKQRNVEVSLKR----MLMWSDERFYAKW 635

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BLAST of mRNA_D-mesarthrocarpus_Contig10094.1.3 vs. uniprot
Match: A0A834ZIL5_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZIL5_9MAGN)

HSP 1 Score: 59.3 bits (142), Expect = 4.020e-6
Identity = 35/107 (32.71%), Postives = 61/107 (57.01%), Query Frame = 0

Query:   63 KLGWIKSRLEASQEEVRLLILRFPLIFGYSTLKNLDPTVDFFFKELHGTIVEIRKAVLSCPAILSRSLDKRMLPRFRHIRNKNIEPSFERHKWVITTYTDQQF-TKW 168
            K+ +++S L  S EE   +  R P IFGYS   NL P  D+  KE+  ++ ++++     P   + SL+KR++PR  H++ +N+E   +R    +  ++DQ+F  KW
Sbjct:  181 KIRFLES-LGLSYEESARICARLPPIFGYSIENNLRPKFDYLVKEMKRSVEDLKRF----PQYFAFSLEKRIVPRHLHLKERNVEVPLQR----MLLWSDQRFYAKW 278

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig10094.1.3 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig10094.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G420_ECTSI	1.940e-11	68.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7J0FB30_9ERIC	2.100e-6	32.73	GTP binding protein beta 1 n=1 Tax=Actinidia rufa ...	[more]
A0A834ZIL5_9MAGN	4.020e-6	32.71	Uncharacterized protein n=1 Tax=Tetracentron sinen...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 79..111 e-value: 0.72 score: 18.9 coord: 116..147 e-value: 0.071 score: 22.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 73..151 e-value: 9.3E-11 score: 41.2
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 45..167 e-value: 9.6E-13 score: 49.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig10094	contig	D-mesarthrocarpus_Contig10094:319..4162 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig10094.1.3	mRNA_D-mesarthrocarpus_Contig10094.1.3	Discosporangium mesarthrocarpum MT17_79	mRNA	D-mesarthrocarpus_Contig10094 319..4162 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10094.1.3 ID=prot_D-mesarthrocarpus_Contig10094.1.3|Name=mRNA_D-mesarthrocarpus_Contig10094.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=482bp
GAQVPKAHGLPAPCSCHPQDLMAEEHAGPGQARAPEGKTMTPPRICQGEG
ILSRSVDDCLEPKLGWIKSRLEASQEEVRLLILRFPLIFGYSTLKNLDPT
VDFFFKELHGTIVEIRKAVLSCPAILSRSLDKRMLPRFRHIRNKNIEPSF
ERHKWVITTYTDQQFTKWLSGQGRAPWPTPQTPVAPVAAGAGVGAPPMLP
GAPRAPVSPATTGTPEPPVSSAVNPSPVHLHTTLPGPLPPPPTPPPPLLN
RHQPPGRMTVPGVAPAVAPGGSGAGAGVVVMASMSNPTDIEGVPLPPAHP
QGLDGVTTSGSLMSSVGQPETAGSGGEVNAGLTGLAARHSGLTVGQEKLS
MGQTESAPGQAGLAALGQKGTEDKGSGRDQFVVATGGRGSEGSATGEVES
TPGKANSDEPETSGTELSLPRAKGPSIQGLGEPGARGENQAKAAPWPEGG
QDGAGATTGTGSREQATGATKDRWGDTAEALS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF
IPR038538	MTERF_sf