mRNA_D-mesarthrocarpus_Contig10086.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: D8LD77_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD77_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 4.220e-27
Identity = 62/77 (80.52%), Postives = 73/77 (94.81%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALKLKQRAMRQGR 231
            MYNKNGRIGIYT++EREAIIARF+RK+ RRVW+KKIRYNCRKNLADKRLR+KGRFVKMS +Q+AALKLKQ+A++  R
Sbjct:  384 MYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKALKSAR 460

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.240e-26
Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALKLKQRAMRQGRGHVAEVGVLAEALE 273
            MYNKNGRIGIYT++EREAIIARF+RK+ RRVW+KKIRYNCRKNLADKRLR+KGRFVKMS +Q+ ALKLKQ+ ++  R   A  G  +  +E
Sbjct:  514 MYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRTALKLKQKVLKSARAAAAASGATSMDME 604

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A835ZBX8_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.390e-22
Identity = 59/76 (77.63%), Postives = 67/76 (88.16%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALKLKQRAMRQG 228
            +YN+NGRIGIYT +EREAIIARF+ K+ RRVWRKKIRYNCRKNLADKRLRIKGRFVKM+  Q+AAL+L QRA   G
Sbjct:  294 VYNRNGRIGIYTAQEREAIIARFKAKRLRRVWRKKIRYNCRKNLADKRLRIKGRFVKMTPAQRAALQL-QRAAEDG 368

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A835Z588_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z588_9STRA)

HSP 1 Score: 106 bits (265), Expect = 5.370e-21
Identity = 53/68 (77.94%), Postives = 63/68 (92.65%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALKL 204
            +YN++GRIGIYT +EREAIIAR+R K+ RRVWRKKIRYNCRKNLADKRLR+KGRFVKM+  Q+AAL+L
Sbjct:  284 VYNRSGRIGIYTLQEREAIIARYRAKRARRVWRKKIRYNCRKNLADKRLRVKGRFVKMTPAQRAALQL 351

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A7S1Z2T2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2T2_TRICV)

HSP 1 Score: 98.6 bits (244), Expect = 3.910e-19
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALK 201
            +YNKNGRIGIYT  ER AIIA+F  K+ RRVW KKIRYNCRKNLAD+R+R+KGRFVK S++Q A LK
Sbjct:  225 VYNKNGRIGIYTPAERAAIIAKFNSKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAQLK 291

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A7S2YJJ2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJJ2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 7.540e-19
Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALKLKQRAMRQ 225
            +YN+NGRIGIYT  ER AIIARF +K+ RRVW KKIRY CRKNLAD+RLR+KGRFVK S  +  A +L+ R  ++
Sbjct:   49 VYNRNGRIGIYTPSERAAIIARFNKKRQRRVWNKKIRYGCRKNLADRRLRVKGRFVKRSEQELLAKELQARVEKE 123

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A6S9FZK2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FZK2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.340e-18
Identity = 49/71 (69.01%), Postives = 60/71 (84.51%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALKLKQR 213
            +YNKNGRIG+YT  ER AIIA+F  K+ RRVW KKIRYNCRKNLAD+R+R+KGRFVK S++Q AAL  +Q+
Sbjct:  291 IYNKNGRIGVYTPAERAAIIAKFNGKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAALAAQQK 361

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A6U6FD34_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FD34_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.410e-18
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALK 201
            +YNKNGRIGIYT  ER AIIA+F  K+ RRVW KKIRYNCRKNLAD+R+R+KGRFVK S++Q A LK
Sbjct:  319 VYNKNGRIGIYTPAERAAIIAKFNSKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAQLK 385

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A7S2MN31_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MN31_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.330e-18
Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVKMSSDQKAALK 201
            +YN+NGRIG+YT  ER AIIA+F  K+ RRVW KKIRYNCRKNLAD+R+R+KGRFVK S++Q AA+K
Sbjct:  287 IYNRNGRIGVYTPAERAAIIAKFNGKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAAVK 353

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BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Match: A0A7S4AF00_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AF00_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.700e-17
Identity = 46/57 (80.70%), Postives = 51/57 (89.47%), Query Frame = 1

Query:    1 MYNKNGRIGIYTKEEREAIIARFRRKKCRRVWRKKIRYNCRKNLADKRLRIKGRFVK 171
            +YNKNGRIGIYT  ER AIIARF+ K+ RRVW KKIRYNCRKNLAD+RLR+KGRFVK
Sbjct:  159 VYNKNGRIGIYTPAERAAIIARFQSKRTRRVWNKKIRYNCRKNLADRRLRVKGRFVK 215

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig10086.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LD77_ECTSI	4.220e-27	80.52	CCT domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K330_9PHAE	2.240e-26	69.23	CCT domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A835ZBX8_9STRA	5.390e-22	77.63	CCT domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A835Z588_9STRA	5.370e-21	77.94	CCT domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A7S1Z2T2_TRICV	3.910e-19	73.13	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S2YJJ2_9STRA	7.540e-19	64.00	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A6S9FZK2_9STRA	1.340e-18	69.01	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A6U6FD34_9STRA	3.410e-18	73.13	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S2MN31_9STRA	5.330e-18	70.15	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S4AF00_9STRA	1.700e-17	80.70	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]

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Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789153.887508-CDS-D-mesarthrocarpus_Contig10086:753..863	1680789153.887508-CDS-D-mesarthrocarpus_Contig10086:753..863	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig10086 754..863 +
1680789153.899606-CDS-D-mesarthrocarpus_Contig10086:1912..2038	1680789153.899606-CDS-D-mesarthrocarpus_Contig10086:1912..2038	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig10086 1913..2038 +
1680789153.9139886-CDS-D-mesarthrocarpus_Contig10086:2213..2448	1680789153.9139886-CDS-D-mesarthrocarpus_Contig10086:2213..2448	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig10086 2214..2448 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789153.9327588-UTR-D-mesarthrocarpus_Contig10086:2448..3676	1680789153.9327588-UTR-D-mesarthrocarpus_Contig10086:2448..3676	Discosporangium mesarthrocarpum MT17_79	UTR	D-mesarthrocarpus_Contig10086 2449..3676 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig10086.1.1	prot_D-mesarthrocarpus_Contig10086.1.1	Discosporangium mesarthrocarpum MT17_79	polypeptide	D-mesarthrocarpus_Contig10086 754..2448 +