prot_D-mesarthrocarpus_Contig1008.7.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig1008.7.2
Unique Nameprot_D-mesarthrocarpus_Contig1008.7.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length279
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: D7FNU9_ECTSI (RNA binding / nucleic acid binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU9_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 4.890e-76
Identity = 147/229 (64.19%), Postives = 159/229 (69.43%), Query Frame = 0
Query:   63 SVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQ-------------PMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPGGQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARKA 278
            S+ SVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPF+EK M+IQFAK+ESDV+TKK GTYV R+KRKLP              P P +  P A              XXXXXXXX           P+   P       VPHNILYAT LPP ITQ+ML KLFEQY GF EARMAPGGQAFIEF D MQAG+ALNAL GF L++T  LQL FARKA
Sbjct:   28 SLHSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKSESDVVTKKAGTYVPRDKRKLPSADASNGNGLHQAAPAPAATTPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGD----VPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFARKA 252          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: F0YDU7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU7_AURAN)

HSP 1 Score: 183 bits (465), Expect = 4.610e-54
Identity = 107/217 (49.31%), Postives = 130/217 (59.91%), Query Frame = 0
Query:   63 SVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            S+ SVFSQFGKI+D+V CRGLKL+GQAWVVFA+   ATNALRQMQGFPF++K M+I FAK +SDV++K +G++VAREKRK   P P               APPAT                   AP+    A       P N+L+A DLP     +ML  LF+QY GFKE RM PG  G AF+EF D  QA +AL  L  F LT T  L L FA++
Sbjct:   27 SIYSVFSQFGKILDVVCCRGLKLRGQAWVVFADVGAATNALRQMQGFPFFDKPMRIAFAKAKSDVVSKADGSFVAREKRKREAPPPK--------------APPATEALE---------------APKPAKAAKADKNATPSNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRMVPGKKGIAFVEFADETQASLALQGLDNFKLTPTDTLALSFAKR 214          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A6V1NUL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUL1_HETAK)

HSP 1 Score: 174 bits (441), Expect = 3.430e-50
Identity = 104/217 (47.93%), Postives = 132/217 (60.83%), Query Frame = 0
Query:   63 SVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            S+ S+FSQFGKI++IVACRGLKL+GQAWV FA+ + ATNALRQMQGFPFYEK M+I FAK +SD + K+ G Y   +KR+  +            + +A +    T          +   +  PV      PA+     VPH IL+A +LP    ++ML  LF+QY+G+KE RM PG  G AFIEF D MQAG AL  L GF LT    LQL +ARK
Sbjct:   29 SLHSIFSQFGKIIEIVACRGLKLRGQAWVCFADTAAATNALRQMQGFPFYEKPMRIAFAKNKSDKVLKREGVYDPAKKRRKMEXXXXXXXXXXXXESVAAMEQEPTPAAVVQPAFTAVQQVEQPV------PAN-----VPHRILFAQNLPDDCNEMMLDMLFQQYNGYKEVRMVPGKKGLAFIEFGDEMQAGYALQGLNGFKLTPQDLLQLSYARK 234          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A7S2DHN7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHN7_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.030e-49
Identity = 103/224 (45.98%), Postives = 132/224 (58.93%), Query Frame = 0
Query:   56 KTRSTHTSVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            K +    ++ SVFSQFGKIV+IVACRGLKL+GQAW+ F     AT+A+ +MQGFPFY+K MKI F+KT+SD + K++GT+VAREKRK  +  P +E  P      A      T                    P+ +  AD      P +IL+A +LP     +ML  LF+ Y+GFKE RM PG  G AFIEF D + AG AL  L GF LT TQ L L FA++
Sbjct:   35 KKQPLRKALYSVFSQFGKIVEIVACRGLKLRGQAWICFETVEAATHAMAKMQGFPFYDKPMKIAFSKTKSDCVAKRDGTFVAREKRKREEKAPRAESEPTAMDTSASKISTPT--------------------PQILQAADLNAT--PSSILFAQNLPEDCNDMMLSMLFKTYAGFKEVRMVPGKKGLAFIEFTDEVSAGSALQGLHGFKLTPTQTLALSFAKR 236          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A7S2UV81_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV81_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.330e-48
Identity = 97/217 (44.70%), Postives = 127/217 (58.53%), Query Frame = 0
Query:   63 SVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            S+ S+FSQFGKI+ I ACRG+KL+GQAWVVF +K+ ATNALRQMQGFPFYEK M+I F+KT+SDV+ K++GTY  R+++  P P P +   P+        A                       A +  P         P+ IL+A  LP    +++L  LF+QY GF E RM PG  G AF+EF+D MQAG A+  L GF LT    L L +A +
Sbjct:   22 SLHSIFSQFGKIIQITACRGIKLRGQAWVVFQDKASATNALRQMQGFPFYEKPMRIAFSKTKSDVVAKRDGTYTKRKRKAPPAPAPDAPAQPSAPFAQTTAA-----------------------AGKNNP---------PNRILFAEGLPDDCNEMVLGMLFKQYIGFSEVRMVPGKSGIAFVEFEDEMQAGYAMTGLNGFKLTPNDTLSLSYAMR 206          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A7S3NJ60_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ60_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.690e-48
Identity = 98/214 (45.79%), Postives = 131/214 (61.21%), Query Frame = 0
Query:   66 SVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            S+FSQFGKI+D+V CRG++L+GQAW+ FA+   AT+A+++MQGFPFY+K M+I FAK++SD+I K +GT+V+REKRK        E PPA     A  AP                    P  P  + P        P N+L+A +LP    Q ML  LF+QY+G+KE RM PG  G AFIEF D +QA +AL  L GF+L+ T  L L FA++
Sbjct:   35 SLFSQFGKILDLVCCRGIRLRGQAWICFADIGAATSAMQKMQGFPFYDKPMRIAFAKSKSDIIAKADGTFVSREKRKR-------ESPPAANTDAAHQAPQKKQL---------------PTPPTNLTP--------PSNVLFAQNLPDECNQNMLVILFQQYTGYKEVRMVPGKKGIAFIEFADDVQASLALAGLNGFSLSPTHALNLSFAKR 218          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A812Y221_SYMMI (Snrpb2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y221_SYMMI)

HSP 1 Score: 167 bits (422), Expect = 1.560e-47
Identity = 93/214 (43.46%), Postives = 133/214 (62.15%), Query Frame = 0
Query:   66 SVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            ++FSQ+GK+++IVAC+G++L+GQAW+V+ + S ATNA+R++QGF FY+K ++I FAKT+SD++ KK+GT+  R+KR   +         +  +  A  APP                  PPVA    P  +     VPH IL+A +LP      ML  LF+QY GF+E RMAPG  G AFIEFQD +QAG+AL  L GF L++   LQL + ++
Sbjct:   29 ALFSQYGKVIEIVACKGIRLRGQAWIVYQDTSSATNAMRRLQGFNFYDKPLRISFAKTKSDIVAKKDGTFNPRQKRVREEQS-------SAMEDGARAAPPPAQYKE------------PPVAKTPKPIVNN----VPHRILFAQNLPDECNDQMLAALFQQYPGFQEVRMAPGKKGIAFIEFQDVVQAGIALQQLSGFQLSAADTLQLTYGKQ 219          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A8J2X4I1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4I1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.850e-47
Identity = 100/217 (46.08%), Postives = 127/217 (58.53%), Query Frame = 0
Query:   63 SVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPG--GQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            S+ SVFSQFGKI+D+V CRGLKL+GQAWVVFA+   ATNALRQMQGFPFY+K M+I FAK++SD+I K++GT+  REKRK   P P +   PA  + +                  +PG   PP                       ++LP   + +ML  LF+QY+GFKE RM PG  G AF+EF D  QA +A   L GF LT T  L L FA++
Sbjct:   27 SIYSVFSQFGKILDVVCCRGLKLRGQAWVVFADVGAATNALRQMQGFPFYDKPMRIAFAKSKSDMIAKRDGTFKPREKRKREDPKPAA---PAAAKALP-----------------APGDAPPPKVXXXX-------XXXXXXXXXXSNLPEDCSDMMLGILFQQYAGFKEVRMVPGNKGIAFVEFADETQASLARQGLDGFKLTPTDALSLVFAKR 216          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A0S3S4Y7_PHAAN (Uncharacterized protein n=2 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3S4Y7_PHAAN)

HSP 1 Score: 167 bits (422), Expect = 5.560e-47
Identity = 111/245 (45.31%), Postives = 146/245 (59.59%), Query Frame = 0
Query:   35 PSLRYYWRIPSLAASMLVPRRKTRSTHTSVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVAPPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARM--APGGQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            P LR+ W I SL   ML    K      S+ +VF+QFGKI++++A + LK KGQAWVVF E S A+NALRQMQGFPFY+K M+IQ+AKT+SDVI K +GT+V REKRK      G +      Q  A +A    +         +P    P  A   VP A  P    P+NIL+  +LP   T +MLQ LF QY GFKE RM  A  G AF+E+ D MQ+ VA+ +L+GF +T    + + +A+K
Sbjct:   32 PQLRFRWIIRSLNCRMLDVELKK-----SLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPREKRKRHDDK-GKK---RKDQHDANLAGMGLNPAYSGAYGATPTIPYPGGAKSMVPEAPAP----PNNILFIQNLPNESTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQSLQGFKITPQNPMLITYAKK 263          
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Match: A0A176VE80_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VE80_MARPO)

HSP 1 Score: 165 bits (417), Expect = 1.570e-46
Identity = 110/230 (47.83%), Postives = 143/230 (62.17%), Query Frame = 0
Query:   56 KTRSTHTSVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGSEPPPAVRQRIAEVA------PPATSXXXXXXXXLSPGGLLPPVAPETVPPADTPGVIVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARM--APGGQAFIEFQDAMQAGVALNALKGFNLTSTQQLQLDFARK 277
            K      S+ +VFSQFGKI+DIVAC+ LKL+GQAWVVF + + ATNALRQMQGFPFY+K M+IQ+AK++SD ++K +GT+V+REKRK            A R+R    A      PPA++ XXXXXXX                    P    P+NIL+A +LP     +M++ LF+Q+ GFKE RM  A  G AFIEF D MQA VAL AL  F +T T  +Q+ +A+K
Sbjct:   21 KKEELKKSLYAVFSQFGKILDIVACKTLKLRGQAWVVFDDVTAATNALRQMQGFPFYDKPMRIQYAKSKSDAVSKADGTFVSREKRKKNDEK-------AERKRREHQAEAPAAGPPASAYXXXXXXXXXXXXXXXXXXXXXXXXXXXP----PNNILFAQNLPREANNLMIEMLFQQFPGFKEVRMIEAKPGIAFIEFGDEMQASVALQALHNFKITPTNPMQISYAKK 239          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1008.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU9_ECTSI4.890e-7664.19RNA binding / nucleic acid binding n=2 Tax=Ectocar... [more]
F0YDU7_AURAN4.610e-5449.31Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6V1NUL1_HETAK3.430e-5047.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DHN7_9STRA1.030e-4945.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2UV81_9STRA1.330e-4844.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3NJ60_9STRA2.690e-4845.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A812Y221_SYMMI1.560e-4743.46Snrpb2 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A8J2X4I1_9STRA2.850e-4746.08Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0S3S4Y7_PHAAN5.560e-4745.31Uncharacterized protein n=2 Tax=Phaseoleae TaxID=1... [more]
A0A176VE80_MARPO1.570e-4647.83Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 206..273
e-value: 1.5E-7
score: 41.1
coord: 45..119
e-value: 0.0078
score: 25.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 208..266
e-value: 1.6E-8
score: 34.3
coord: 66..116
e-value: 1.9E-6
score: 27.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 48..123
score: 10.462521
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 205..277
score: 12.475058
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 200..277
e-value: 2.7E-14
score: 55.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 51..141
e-value: 7.8E-18
score: 66.5
NoneNo IPR availablePANTHERPTHR10501:SF13U1 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 56..277
NoneNo IPR availablePANTHERPTHR10501U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Bcoord: 56..277
NoneNo IPR availableCDDcd12247RRM2_U1A_likecoord: 203..272
e-value: 1.42732E-24
score: 91.8615
NoneNo IPR availableCDDcd12246RRM1_U1A_likecoord: 67..122
e-value: 4.56867E-31
score: 108.77
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 61..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1008contigD-mesarthrocarpus_Contig1008:14495..20306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1008.7.2mRNA_D-mesarthrocarpus_Contig1008.7.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig1008 14449..21382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig1008.7.2 ID=prot_D-mesarthrocarpus_Contig1008.7.2|Name=mRNA_D-mesarthrocarpus_Contig1008.7.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=279bp
MGVMGSRSARPSRIYRFSAENCVLFGVGRGHRGTPSLRYYWRIPSLAASM
LVPRRKTRSTHTSVCSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMAT
NALRQMQGFPFYEKNMKIQFAKTESDVITKKNGTYVAREKRKLPQPMPGS
EPPPAVRQRIAEVAPPATSVAPPAMSVLSPGGLLPPVAPETVPPADTPGV
IVPHNILYATDLPPGITQIMLQKLFEQYSGFKEARMAPGGQAFIEFQDAM
QAGVALNALKGFNLTSTQQLQLDFARKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf