Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10075.1.1 vs. uniprot
Match:
D7FS63_ECTSI (TGc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS63_ECTSI)
HSP 1 Score: 64.7 bits (156), Expect = 3.470e-9
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 166 INAVDLQPRQHFVSLM-GVLDGVLLPSSPPHLMHSYMRMHTTD-----------------GFASMD--VTDRKLFNAAQAQLLREEPSEGLGMHSKGIVDWDGRSEYFSHMANE 447
+ A + RQ FV+L GVL GVL P P L+HSY+ + G+ +D + D LF+AA+A+L++E +EG G+H G+ +WDG S+ F MA E
Sbjct: 290 LQAQGIPARQRFVNLSNGVLRGVLSPP-PARLLHSYVEVQLDGRVDGGPPDCSELGQDSLGWIRVDGYIADPALFHAARARLVKENMTEGYGVHVNGVNEWDGASDSFCQMAEE 402
BLAST of mRNA_D-mesarthrocarpus_Contig10075.1.1 vs. uniprot
Match:
A0A6H5LB97_9PHAE (TGc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB97_9PHAE)
HSP 1 Score: 60.1 bits (144), Expect = 8.660e-8
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 166 INAVDLQPRQHFVSLM-GVLDGVLLPSSPPHLMHSYMRMHTTD------------------GFASMD--VTDRKLFNAAQAQLLREEPSEGLGMHSKGIVDWDGRSEYFSHMANE 447
+ A + RQ FV+L GVL GVL P P L+HSY+ + G+ +D + D LF+AA+A+L++E +EG G+H G +WDG + F MA E
Sbjct: 80 LQAQGIPARQRFVNLSNGVLRGVLSPP-PARLLHSYVEVKLDGQVGDGDPPGSSELGQDSLGWIRVDGYIADPALFHAARARLVKENMTEGYGVHVNGANEWDGTLDSFCQMAEE 193
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10075.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 3.47e-9 / Id = 35.96 Expect = 8.66e-8 / Id = 34.78 Sequence D7FS63_ECTSI A0A6H5LB97_9PHAE
Match Name E-value Identity Description
D7FS63_ECTSI 3.470e-9 35.96 TGc domain-containing protein n=1 Tax=Ectocarpus s... [more] A0A6H5LB97_9PHAE 8.660e-8 34.78 TGc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Seed ortholog 2880.D7FS63 PFAMs Transglut_core Model size 485 Max annot lvl 2759|Eukaryota Hectar predicted targeting category other localisation Exons 2 Evalue 5.69e-10 EggNOG OGs 2DPTS@1|root,2S6A9@2759|Eukaryota Description Transglutaminase-like superfamily Cds size 483 COG category S
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789153.1173122-CDS-D-mesarthrocarpus_Contig10075:397..667 1680789153.1173122-CDS-D-mesarthrocarpus_Contig10075:397..667 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10075 398..667 + 1680789153.1300573-CDS-D-mesarthrocarpus_Contig10075:743..956 1680789153.1300573-CDS-D-mesarthrocarpus_Contig10075:743..956 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10075 744..956 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10075.1.1
>prot_D-mesarthrocarpus_Contig10075.1.1 ID=prot_D-mesarthrocarpus_Contig10075.1.1|Name=mRNA_D-mesarthrocarpus_Contig10075.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=161bp
SQREGSHNLQLLSRLGEVRIHRVFRRGHSRPENGSRSRAPAILSRHSLKP back to top mRNA from alignment at D-mesarthrocarpus_Contig10075:398..956+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10075.1.1 ID=mRNA_D-mesarthrocarpus_Contig10075.1.1|Name=mRNA_D-mesarthrocarpus_Contig10075.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=559bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10075:398..956+ (Discosporangium mesarthrocarpum MT17_79)TCCCAAAGAGAAGGCTCTCACAATCTTCAACTATTGTCACGGCTCGGTGA
GGTTCGGATTCACCGGGTATTTCGACGAGGACACTCCAGACCAGAAAATG
GCAGCAGGTCGAGAGCGCCTGCAATCCTCAGCAGGCACTCTTTGAAACCG
TGGATAAACCCATGGATAAACGCCGTCGATTTGCAACCGCGGCAGCACTT
CGTTAGCCTAATGGGGGTGCTGGACGGAGTGTTGTTGCCCAGCTCCCCAC
CGCACTTAATGCACTCATAC GTGGAGATTCGCCTCCCGAAAGAAGGTACT
GATGCCGGCAACACAGGTGATAGTAAGGGCCGCGGTGGGGGGGGAGATGA
GGATGCACACTACCGATGGGTTCGCATCGATGGACGTTACTGACCGCAAA
CTCTTCAACGCAGCGCAGGCGCAGTTGCTCCGAGAAGAGCCCTCGGAGGG
CCTAGGGATGCACTCCAAGGGGATAGTGGACTGGGATGGGCGGTCAGAAT
ACTTCAGCCACATGGCGAACGAGGCTGGGGGGCAGGTCTTTAAGGATACA
GGCGTCATA back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10075:398..956+
>mRNA_D-mesarthrocarpus_Contig10075.1.1 ID=mRNA_D-mesarthrocarpus_Contig10075.1.1|Name=mRNA_D-mesarthrocarpus_Contig10075.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=483bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10075:398..956+ (Discosporangium mesarthrocarpum MT17_79) back to top