Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10065.1.1 vs. uniprot
Match:
D7FS65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS65_ECTSI)
HSP 1 Score: 119 bits (297), Expect = 3.010e-30
Identity = 54/80 (67.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 76 EVEEDPALFVLPNDNTGKGIDYGILGRKTWDTLRDYCTKWGIKQAHLETIYSRFERTILRTEHLDFTKKPQFHVSLDFLA 315
E E P FVL D+TG GI+Y IL ++W L YC KWGIKQAHLE+IYSRF RTI+RTEHLDFT KPQ+H SLDFLA
Sbjct: 30 EPEGPPQKFVLAGDDTGSGIEYNILDPESWQKLEHYCKKWGIKQAHLESIYSRFARTIIRTEHLDFTLKPQYHASLDFLA 109
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10065.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 3.01e-30 / Id = 67.50 Sequence D7FS65_ECTSI
Match Name E-value Identity Description
D7FS65_ECTSI 3.010e-30 67.50 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Model size 315 Hectar predicted targeting category other localisation Exons 2 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-01_000720.1 Cds size 315
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789152.6459165-CDS-D-mesarthrocarpus_Contig10065:919..1045 1680789152.6459165-CDS-D-mesarthrocarpus_Contig10065:919..1045 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10065 920..1045 - 1680789152.6582434-CDS-D-mesarthrocarpus_Contig10065:1340..1529 1680789152.6582434-CDS-D-mesarthrocarpus_Contig10065:1340..1529 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10065 1341..1529 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10065.1.1
>prot_D-mesarthrocarpus_Contig10065.1.1 ID=prot_D-mesarthrocarpus_Contig10065.1.1|Name=mRNA_D-mesarthrocarpus_Contig10065.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=105bp
GSRQKSRNERGDKVTKDSDKEGRKGEVEEDPALFVLPNDNTGKGIDYGIL back to top mRNA from alignment at D-mesarthrocarpus_Contig10065:920..1529-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10065.1.1 ID=mRNA_D-mesarthrocarpus_Contig10065.1.1|Name=mRNA_D-mesarthrocarpus_Contig10065.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=610bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10065:920..1529- (Discosporangium mesarthrocarpum MT17_79)GGTAGTCGACAGAAGTCCAGGAACGAAAGAGGAGACAAAGTCACGAAGGA
TTCAGACAAGGAAGGGAGAAAGGGAGAAGTCGAAGAAGACCCAGCCCTTT
TTGTTCTTCCAAACGACAACACTGGCAAGGGTATTGACTACGGGATCCTA
GGCAGGAAGACCTGGGATACGTTACGAGATTATTGCACG GTGAGATTATT
GCAGTTCCCCGCGGTCTTCAACAAGAACTTCAGCCGTTGACCACCCTCGT
TTGTGTCACGTACGGAGCATCCTTAAAGGATTCAGATCTCTCTCTTTTCC
TTGCTTTCGAGTGACATGGAGGCTAGTGCCATAAGTGAGCAATTACGAAT
CGCTCCCTTATGGCACTAGTCTAAGCAGGGCGATGTCAATCCCCGTAATT
TTCTATGTCTGTGCACATACCATGATGGCAAGCGAACCCATTCCCCATTT
CTCGTCCCTGGTTGCTTCACACGAACACCTGCAGAAATGGGGCATCAAGC
AAGCCCACCTGGAGACGATCTACAGCCGCTTCGAGAGAACAATCTTAAGG
ACAGAGCACTTGGACTTCACCAAAAAGCCACAGTTTCATGTTAGCCTGGA
TTTTCTTGCG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10065:920..1529-
>mRNA_D-mesarthrocarpus_Contig10065.1.1 ID=mRNA_D-mesarthrocarpus_Contig10065.1.1|Name=mRNA_D-mesarthrocarpus_Contig10065.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=315bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10065:920..1529- (Discosporangium mesarthrocarpum MT17_79) back to top