mRNA_D-mesarthrocarpus_Contig10040.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: D7FHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ0_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.930e-48 Identity = 84/106 (79.25%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 1 QHEQDGRVLGSKVKNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIENNVPSDMKYVKPKAGKSLLAKVAAKS-SVSGKSRG 315
Q E D RVLGSK+K DDWTFE+DMVFEHAMAEFEETD+LRWLKVASLLPGK+ EDVRHRYQRL YDVH+IEN VP D+KY PK GKSLLAKVAAKS S S + RG
Sbjct: 83 QMEPDARVLGSKIKRDDWTFEQDMVFEHAMAEFEETDSLRWLKVASLLPGKSHEDVRHRYQRLVYDVHKIENAVPMDVKYKAPKGGKSLLAKVAAKSGSASSRGRG 188
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A6H5K4R8_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R8_9PHAE) HSP 1 Score: 162 bits (410), Expect = 3.750e-45 Identity = 83/103 (80.58%), Postives = 89/103 (86.41%), Query Frame = 1 Query: 7 EQDGRVLGSKVKNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIENNVPSDMKYVKPKAGKSLLAKVAAKSSVSGKSRG 315
E D RVLGSK+K DDWTFE+DMVFEHAMAEFEETD+LRWLKVASLLPGK+ EDVRHRYQRL YDVH+IEN VP D+KY PK GKSLLAKVAAKS S SRG
Sbjct: 50 EPDARVLGSKIKRDDWTFEQDMVFEHAMAEFEETDSLRWLKVASLLPGKSHEDVRHRYQRLVYDVHKIENAVPMDVKYKAPKGGKSLLAKVAAKSG-SASSRG 151
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A836CHK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK7_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 6.560e-15 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 37 VKNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIENNVPSDMKY-VKPKAGKSL 267
+ + +WTFEE+ VFE+ ++ F+E D RW K+ASLLP K+ EDVR RYQ+L YDV RIE + ++Y VK + G+SL
Sbjct: 74 IDDGNWTFEEETVFENGLSTFDEDDLERWNKIASLLPEKSPEDVRRRYQKLMYDVTRIEAGMQVSLEYKVKARLGQSL 151
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A7S4D6G4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6G4_HETAK) HSP 1 Score: 65.9 bits (159), Expect = 5.430e-10 Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 1 Query: 52 WTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIE 213
WT EED++FEH +A F E D RW K+ LLP K ++ +R RYQ+L +DV RIE
Sbjct: 65 WTKEEDVMFEHGVATFNEGDEERWAKIQKLLPSKTEDQIRKRYQKLLFDVSRIE 118
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A5D6XTB4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTB4_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.570e-7 Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 52 WTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIENNVPSD 231
WTFEED +FE+A+A++ W K+A+ LPGK +D R+RY++L DV IE + D
Sbjct: 225 WTFEEDKIFENALAKWSSDKPYSWPKIATALPGKTAKDARNRYEKLVGDVAIIETSGGDD 284
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A834GHP1_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834GHP1_RHOSS) HSP 1 Score: 56.6 bits (135), Expect = 6.080e-7 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 31 SKVKNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIEN 216
S ++ WT ED FEHA+ F + + RW ++A LLPGK+QE+VR Y+ L DV I++
Sbjct: 25 SATQSSTWTRPEDKAFEHALVVFPDGTSDRWRRIAELLPGKSQEEVRAHYEALVDDVFEIDS 86
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A835Q9A4_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q9A4_VANPL) HSP 1 Score: 57.0 bits (136), Expect = 6.650e-7 Identity = 25/64 (39.06%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 22 VLGSKVKNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIE 213
++G+ +++W+ +E+ +FE+A+A F+E RW KVA+++PGK +DV++ Y+ L DV IE
Sbjct: 23 IIGNNKSSENWSQQENKLFENALAHFDEHTPNRWEKVAAMIPGKTVDDVKNHYEVLKEDVSCIE 86
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A5J5BI44_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BI44_9ASTE) HSP 1 Score: 56.6 bits (135), Expect = 9.720e-7 Identity = 24/56 (42.86%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 49 DWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIEN 216
+W+ E+D FE+A+A + E + RW K+AS++PGK+ E+++H Y+ L DV++IE+
Sbjct: 10 EWSREQDKAFENALATYPEDSSDRWEKIASVVPGKSFEEIKHHYELLVDDVNQIES 65
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A1S2YTX2_CICAR (transcription factor SRM1-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YTX2_CICAR) HSP 1 Score: 55.8 bits (133), Expect = 1.680e-6 Identity = 23/56 (41.07%), Postives = 41/56 (73.21%), Query Frame = 1 Query: 49 DWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIEN 216
+W+ EED+ FE+A+A + E D RW K+A+ +PGK +++++ Y+ L YD++ IE+
Sbjct: 13 EWSREEDIAFENALAIYPENDVNRWEKIAADVPGKTLQEIKYHYEVLVYDINLIES 68
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Match: A0A314XZK2_PRUYE (Transcription factor DIVARICATA n=7 Tax=Prunus TaxID=3754 RepID=A0A314XZK2_PRUYE) HSP 1 Score: 55.5 bits (132), Expect = 2.270e-6 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 40 KNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGKNQEDVRHRYQRLYYDVHRIEN 216
++ +WT EE+ FE A+A F+E RWLKVAS++PGK DV +YQ L DV IE+
Sbjct: 21 QSSEWTKEENKKFESALAMFDEKTPDRWLKVASMIPGKTVIDVIKQYQELEEDVSEIES 79 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10040.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10040.1.1 >prot_D-mesarthrocarpus_Contig10040.1.1 ID=prot_D-mesarthrocarpus_Contig10040.1.1|Name=mRNA_D-mesarthrocarpus_Contig10040.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=136bp QHEQDGRVLGSKVKNDDWTFEEDMVFEHAMAEFEETDALRWLKVASLLPGback to top mRNA from alignment at D-mesarthrocarpus_Contig10040:97..1331- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10040.1.1 ID=mRNA_D-mesarthrocarpus_Contig10040.1.1|Name=mRNA_D-mesarthrocarpus_Contig10040.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1235bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10040:97..1331- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10040:97..1331- >mRNA_D-mesarthrocarpus_Contig10040.1.1 ID=mRNA_D-mesarthrocarpus_Contig10040.1.1|Name=mRNA_D-mesarthrocarpus_Contig10040.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=408bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10040:97..1331- (Discosporangium mesarthrocarpum MT17_79)back to top |