mRNA_D-mesarthrocarpus_Contig10030.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10030.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10030.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10030.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10030contigD-mesarthrocarpus_Contig10030:46..2005 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008870970.1
PFAMsPkinase
Model size721
Max annot lvl2759|Eukaryota
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categoryother localisation
Exons5
Evalue6.38e-05
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota
EC2.8.1.8
Descriptionprotein serine/threonine kinase activity
Cds size534
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10030.1.1prot_D-mesarthrocarpus_Contig10030.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10030 195..1967 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789149.3550346-UTR-D-mesarthrocarpus_Contig10030:45..1941680789149.3550346-UTR-D-mesarthrocarpus_Contig10030:45..194Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10030 46..194 -
1680789149.416359-UTR-D-mesarthrocarpus_Contig10030:1967..20051680789149.416359-UTR-D-mesarthrocarpus_Contig10030:1967..2005Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10030 1968..2005 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789149.3660197-CDS-D-mesarthrocarpus_Contig10030:194..3651680789149.3660197-CDS-D-mesarthrocarpus_Contig10030:194..365Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10030 195..365 -
1680789149.378894-CDS-D-mesarthrocarpus_Contig10030:817..9431680789149.378894-CDS-D-mesarthrocarpus_Contig10030:817..943Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10030 818..943 -
1680789149.3873208-CDS-D-mesarthrocarpus_Contig10030:1321..13941680789149.3873208-CDS-D-mesarthrocarpus_Contig10030:1321..1394Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10030 1322..1394 -
1680789149.3959184-CDS-D-mesarthrocarpus_Contig10030:1681..18161680789149.3959184-CDS-D-mesarthrocarpus_Contig10030:1681..1816Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10030 1682..1816 -
1680789149.405282-CDS-D-mesarthrocarpus_Contig10030:1938..19671680789149.405282-CDS-D-mesarthrocarpus_Contig10030:1938..1967Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10030 1939..1967 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10030.1.1

>prot_D-mesarthrocarpus_Contig10030.1.1 ID=prot_D-mesarthrocarpus_Contig10030.1.1|Name=mRNA_D-mesarthrocarpus_Contig10030.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=178bp
MEDNGRGMQRDARTPPRKSVKLPKPKLGMATLRKEYLVDPDGRRSSCELL
ESAESGKTFFLIRPFGDGAIYGEVWHALEVCVDYNAGEYTPRLDVDGKKR
EFAVKRMDWDKINNPREKKCENPLHEIAALEILSEPGHPNVLKLVEALND
GGLPLVCGWGLSCVQAHLLCCMIALKE*
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mRNA from alignment at D-mesarthrocarpus_Contig10030:46..2005-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10030.1.1 ID=mRNA_D-mesarthrocarpus_Contig10030.1.1|Name=mRNA_D-mesarthrocarpus_Contig10030.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1960bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10030:46..2005- (Discosporangium mesarthrocarpum MT17_79)
CTGAGAGTGGGGTAGTATACCTTCTTCGAGAAGGAGGAATGGAGGACAAC
GGCCGTGGAATGCAAAGGTGAGTGCATGCTTTGATTATCTACAGTCCAGG
TCTGCTTGTGGGCATTGCAACAGAGTTCAAACCGTGCCAACGACACCCTC
GAGCTAACCTCGTCCGTTTGTCACCGGCATTGCTTGAAGGGACGCGCGCA
CCCCACCCAGGAAGAGCGTTAAACTTCCAAAACCGAAACTGGGGATGGCG
ACTCTGCGGAAAGAATACTTAGTAGATCCGGACGGCAGGCGCAGCTCGTG
TGAGCTGCTGGAGTCGGCAGAAAGGTGATGCAAGTTGCCGCCGTGGAGAA
TTGAAAACATTTGGTTCCCTGGGAATCTGCACATGATGCTCCCCGCGCTG
CTTTCGCCCCTATCTCCCACACTCTTCGTTCTCCTTCTCACTTCATATGG
GCTGGACTACAAGAGGTAACTTGAAATAATCATGGAGATGTCCTGCGGTT
TTCTTGATCCATCCTACTTTGTCTTTCCCATTCCCAGCCTCGTCTCACCG
GGCTGTGCTTTGCGTTTGCTGTGTCTTGTGTTTGCTGTGCTTTTCGTTTG
GCTACACTCAGTGGAAAGACGTTCTTCTTGATAAGGCCGTTTGGAGATGG
AGCCATATATGGTGAAGTGTGGCACGCATTGGAGGTGAAGCTCTTTCCCA
TACAGCAGAAGAACATAATCATTCCCCACCTTCTGTTGTCCCCTTCTGCT
CAGCTTTCACTGCAGCGCCTTGTTTTGTGAGCCTTTCATCGTAACATTTG
CCATCTTTTCAATCACGAACCAGCACTGTTGTCCATGGTCTGATCTGAAG
CCCAGAAAAATCTGTGGCGGCAGGAGATGTGAAGTCTATCGGTGTGGCGT
ACACTTTGATCTTGGTCCATCTAAACGTGGAACCTACGTAATACAGGGCA
CTAAAAAAATCTTGACCACCCTGTCCCCGGTACATCCCCAATGTTCCTCA
TGCCAATCGGGCTTCACGGACACATACCCACCCGAGCCACACCCACTTGC
AACATGGTACAGGTTTGCGTTGACTACAACGCAGGGGAGTACACACCTCG
TCTGGATGTTGATGGGAAGAAGAGAGAGTTCGCGGTGAAACGCATGGACT
GGGACAAGATTAATAACCCTAGGGAGAAAAAGTGTGAGGTGAGGGATACG
CATGGGATGGGGAGCCCTTCATCAGGCGACCATTGCTCAGCAAATAGAAA
AAAATGGAAAACAGGAGATCGGTGCATTCAGCTTTCACTGTTCCACGCCT
GCAGCAAGCTTGGAGACAAGCTCCCCAGCTAAGAGTTAATTTGTTTTACA
GAAAGAAGCAATGGACCGAGGCCTCCAGGATCACAGGTATCGTCTTTGTG
TACGGGTTCCCAGTCTCCCCTCTGCTTTATCCTTAGCTTTGGTCTGTCTT
TGTTTCACCACTCCCCAACTGTTTCTGGTCTAGATGGTGGCATGGCATTC
AGCATCTTGCAGGGCATCCAAGGCATGAAGCTGGTTGCATGTCACAAAAT
GGTTCCAGAATCAAAAAGATTGCTCTTGTATGCACACACCAACCCAATCA
CCCCCCCTCAATACACCCCTTTGCCGGTTGGGATTACCAGAACCCACTGC
ATGAAATCGCGGCACTGGAGATTCTGTCAGAGCCAGGTCACCCCAATGTC
CTGAAACTGGTTGAGGCACTCAATGATGGTGGGTTGCCACTTGTTTGCGG
TTGGGGTTTAAGTTGTGTCCAGGCTCATTTGCTTTGTTGTATGATCGCCT
TGAAAGAGTGAGATGTGTTCCGTTGTTTTTCCTGGGTGAAAGTTGGTGAT
ATGCTGGTTCTTGTCTGGCTAACCGTTGCAGCCTTTCAATTTGCTGGAAA
AAGTGCGCTTTTGCCGGCTTGTTGATCTGGTTTTTCTGGGGTCTCTTGTT
TGGTTTTCCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10030:46..2005-

>mRNA_D-mesarthrocarpus_Contig10030.1.1 ID=mRNA_D-mesarthrocarpus_Contig10030.1.1|Name=mRNA_D-mesarthrocarpus_Contig10030.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=534bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10030:46..2005- (Discosporangium mesarthrocarpum MT17_79)
ATGGAGGACAACGGCCGTGGAATGCAAAGGGACGCGCGCACCCCACCCAG
GAAGAGCGTTAAACTTCCAAAACCGAAACTGGGGATGGCGACTCTGCGGA
AAGAATACTTAGTAGATCCGGACGGCAGGCGCAGCTCGTGTGAGCTGCTG
GAGTCGGCAGAAAGTGGAAAGACGTTCTTCTTGATAAGGCCGTTTGGAGA
TGGAGCCATATATGGTGAAGTGTGGCACGCATTGGAGGTTTGCGTTGACT
ACAACGCAGGGGAGTACACACCTCGTCTGGATGTTGATGGGAAGAAGAGA
GAGTTCGCGGTGAAACGCATGGACTGGGACAAGATTAATAACCCTAGGGA
GAAAAAGTGTGAGAACCCACTGCATGAAATCGCGGCACTGGAGATTCTGT
CAGAGCCAGGTCACCCCAATGTCCTGAAACTGGTTGAGGCACTCAATGAT
GGTGGGTTGCCACTTGTTTGCGGTTGGGGTTTAAGTTGTGTCCAGGCTCA
TTTGCTTTGTTGTATGATCGCCTTGAAAGAGTGA
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