prot_D-dichotoma_M_contig943.20158.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig943.20158.1
Unique Nameprot_D-dichotoma_M_contig943.20158.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length87
Homology
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A6H5KT20_9PHAE (FtsJ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT20_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.380e-22
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 0
Query:   23 VDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGFL 84
            ++G G GLLARGGTFLGKF AGRDERE+KEEA +LF++V+VVKPPASRS S EMYLLATGFL
Sbjct:  473 IEGEGPGLLARGGTFLGKFFAGRDEREVKEEAERLFERVKVVKPPASRSGSGEMYLLATGFL 534          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A6L7XH06_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6L7XH06_9PROT)

HSP 1 Score: 64.7 bits (156), Expect = 1.300e-10
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGR-LDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            MAP  +G R  DQ R L    A VD   + LLA GGT L K + G+ E +L    G  F +VR  KPPASRS SSEM+LLA+GF
Sbjct:  142 MAPPATGHRSTDQLRSLALAEAAVD-CAAALLAPGGTLLVKLIRGQGEEDLVRALGDTFAEVRREKPPASRSDSSEMFLLASGF 224          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A0D0PZK0_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Wenxinia marina DSM 24838 TaxID=1123501 RepID=A0A0D0PZK0_9RHOB)

HSP 1 Score: 62.8 bits (151), Expect = 7.870e-10
Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            MA S SG +  D  R+         +   +LA GGTF+ K LAG  E EL++   Q F KV  VKPPASR+ SSE ++LATGF
Sbjct:  153 MAASSSGHKQTDHIRIIALCEAAAELAFDVLAPGGTFVAKVLAGGAEGELQKRLKQAFTKVENVKPPASRADSSEKFVLATGF 235          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A4Q3Y9A2_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Loktanella sp. IMCC34160 TaxID=2510646 RepID=A0A4Q3Y9A2_9RHOB)

HSP 1 Score: 61.6 bits (148), Expect = 2.020e-9
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            MA S SG +  D  R+         +   +LA GGTF+ K LAG  E EL++   Q F+KV  VKPPASRS SSE +++ATGF
Sbjct:  154 MAASSSGHKQTDHLRIIALCEAAAYLAFDVLAPGGTFVAKVLAGGAEGELQKLLKQRFEKVANVKPPASRSDSSEKFVVATGF 236          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: UPI0009313B52 (RlmE family RNA methyltransferase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009313B52)

HSP 1 Score: 61.2 bits (147), Expect = 2.880e-9
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   30 LLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGFLEK 86
            +LA GG FL K   G  EREL +   Q FQ VR +KPPASRS S+E+Y+LATGF E+
Sbjct:  188 VLAPGGAFLCKVFQGGTERELLDFLKQRFQTVRHIKPPASRSDSAELYVLATGFKEQ 244          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: UPI000F8D4DB7 (RlmE family RNA methyltransferase n=1 Tax=Pararhodobacter zhoushanensis TaxID=2479545 RepID=UPI000F8D4DB7)

HSP 1 Score: 60.5 bits (145), Expect = 6.080e-9
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            MA S SG +  D  R+             +LA GGTF+ K LAG  E EL++   Q F KV  VKPPASR+ SSE Y++ATGF
Sbjct:  163 MAASASGHKQTDHNRIMALCEHAAYFAFDVLAPGGTFVAKVLAGGAEGELQQLLKQRFTKVVNVKPPASRADSSEKYVVATGF 245          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A6P6YHX0_DERPT (rRNA methyltransferase 2, mitochondrial-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YHX0_DERPT)

HSP 1 Score: 60.1 bits (144), Expect = 6.510e-9
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            M+P+ SG  D D  R+ +         S  L   G FL K   G    +L E+  ++FQKVR VKP ASR+ S+E+Y+LATGF
Sbjct:  137 MSPNVSGQHDYDHERIMQLVYSTIRFSSICLKDQGNFLAKIFNGNQTEKLIEDLSKMFQKVRQVKPEASRADSTELYVLATGF 219          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A839SRP2_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SRP2_9HYPH)

HSP 1 Score: 60.1 bits (144), Expect = 7.520e-9
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGFLEK 86
            MA S +G  + D  R+     +       +LA  G FL K L G  E+EL +   + F KVR VKPPASRS S+E+Y+LATGF  K
Sbjct:  149 MAASSTGHANTDHLRIMTLAEVALDFAEDVLAPDGFFLCKVLQGGSEKELLDRLRKSFAKVRHVKPPASRSDSAELYVLATGFRGK 234          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: A0A1H8PV46_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Salinihabitans flavidus TaxID=569882 RepID=A0A1H8PV46_9RHOB)

HSP 1 Score: 59.7 bits (143), Expect = 9.900e-9
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            MA S SG +  D  R+             +L  GGTF+ K LAG  E EL++   Q F+KV  +KPPASRS SSE +++ATGF
Sbjct:  149 MAASSSGHKQTDHLRIISLCDAAAEFAFDVLEVGGTFVAKVLAGGAEGELQKRLKQRFEKVANIKPPASRSDSSEKFVVATGF 231          
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Match: UPI000C186E3D (RlmE family RNA methyltransferase n=1 Tax=Oceaniglobus indicus TaxID=2047749 RepID=UPI000C186E3D)

HSP 1 Score: 59.7 bits (143), Expect = 1.010e-8
Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDERELKEEAGQLFQKVRVVKPPASRSSSSEMYLLATGF 83
            MA S SG +  D  R+             +L  GGTF+ K LAG  E EL++   Q F KV  VKPPASRS SSE +++ATGF
Sbjct:  154 MAASSSGHKQTDHLRIISLCEAAAHFAFDVLEPGGTFVAKVLAGGAEHELQQLLKQKFTKVANVKPPASRSDSSEKFVVATGF 236          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig943.20158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT20_9PHAE1.380e-2279.03FtsJ domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6L7XH06_9PROT1.300e-1051.19Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A0D0PZK0_9RHOB7.870e-1046.99Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A4Q3Y9A2_9RHOB2.020e-946.99Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI0009313B522.880e-957.89RlmE family RNA methyltransferase n=1 Tax=Hyphomic... [more]
UPI000F8D4DB76.080e-946.99RlmE family RNA methyltransferase n=1 Tax=Pararhod... [more]
A0A6P6YHX0_DERPT6.510e-942.17rRNA methyltransferase 2, mitochondrial-like n=1 T... [more]
A0A839SRP2_9HYPH7.520e-944.19Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A1H8PV46_9RHOB9.900e-944.58Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI000C186E3D1.010e-845.78RlmE family RNA methyltransferase n=1 Tax=Oceanigl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 1..86
e-value: 5.6E-15
score: 57.6
NoneNo IPR availablePANTHERPTHR10920:SF18RRNA METHYLTRANSFERASE 2, MITOCHONDRIALcoord: 1..83
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 1..83
IPR002877Ribosomal RNA methyltransferase FtsJ domainPFAMPF01728FtsJcoord: 27..83
e-value: 2.1E-11
score: 44.2
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 26..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig943contigD-dichotoma_M_contig943:15790..16113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig943.20158.1mRNA_D-dichotoma_M_contig943.20158.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig943 15766..16113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig943.20158.1 ID=prot_D-dichotoma_M_contig943.20158.1|Name=mRNA_D-dichotoma_M_contig943.20158.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=87bp
MAPSFSGDRDMDQGRLDEDPAIVDGIGSGLLARGGTFLGKFLAGRDEREL
KEEAGQLFQKVRVVKPPASRSSSSEMYLLATGFLEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002877rRNA_MeTrfase_FtsJ_dom
IPR029063SAM-dependent_MTases