mRNA_D-dichotoma_M_contig1.1.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1.1.1
Unique NamemRNA_D-dichotoma_M_contig1.1.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: UPI00138FC94C (uncharacterized protein LOC116617085 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC94C)

HSP 1 Score: 102 bits (254), Expect = 5.350e-21
Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 1
Query:    1 HKASFYSEDECPYVEHEAEVYMVASSWDETSATSTLRRTGQAWNTQYLALDGTDAYS-DVIDRVTMFPGTPSGRWVEFEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHVLC 390
            HKAS++S  + PY+  +  ++ V   W+E  A +  R +   W+  YL LDGTDA +       TMF   PSG +VEF+VT AV+ W   G  N GL+V+V+DE ++GR LRF S+A  DS +H +IHV C
Sbjct:   98 HKASWHSPHQAPYLNRDIMIHRVLKPWNEGQANTRYRMSNYPWSQLYLGLDGTDAENMPQSPSTTMFSYRPSG-FVEFDVTRAVKDWAG-GSPNYGLVVRVKDESVDGRGLRFASNADPDSQHHAFIHVKC 226          
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: UPI00138FC51C (uncharacterized protein LOC116617081 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC51C)

HSP 1 Score: 92.4 bits (228), Expect = 1.490e-17
Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 1
Query:    1 HKASFYSEDECPYVEHEAEVYMVASSWDETSATSTLRRTGQAWNTQYLALDGTDAYS-DVIDRVTMFPGTPSGRWVEFEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHVLC 390
            HKAS++S    PY+  +  ++ V   W+E  A S  R +   W+  YL L+  DA +       TMF   PSG +VEF+VT AV  W + G  N G++V+V++E +EGR LRF S+A  DS  H YIHV C
Sbjct:   96 HKASWHSHQLTPYLNRDIMIHRVLKPWNERQANSGYRLSRIRWSQMYLGLNNIDAEARPQSPSTTMFSFRPSG-FVEFDVTRAVRDW-ARGSPNYGVVVRVQNESVEGRGLRFASNADRDSKRHAYIHVKC 224          
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: A0A6S7KVV1_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KVV1_PARCT)

HSP 1 Score: 81.3 bits (199), Expect = 1.670e-14
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 1
Query:   19 SEDECPYVEHEAEVYMVASSWDETSATSTLRRTGQAWNTQYLALDGTDAYSDVIDRVTMFPGTPSGRWVEFEVTEAVEKWVSEGYDNN-GLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHVLC 390
            SE + P V      + V  SW E+ ATST R     W++Q+L L GTDA S  +    + P TP G W   +VT+  + W    Y +N GLL++   E ++GRD RF S+AYSDS+ H YI + C
Sbjct:    2 SESQVPAVTRYITAHTVLKSWIESQATSTKRNNFANWDSQWLNL-GTDANSVALYSTKVTP-TPGGIWYTLDVTQQAQDWK---YGSNYGLLLRDTHEQVQGRDFRFASNAYSDSSKHAYITLRC 121          
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: A0A1F9L3K1_9DELT (Uncharacterized protein n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9L3K1_9DELT)

HSP 1 Score: 58.9 bits (141), Expect = 1.760e-5
Identity = 33/118 (27.97%), Postives = 59/118 (50.00%), Query Frame = 1
Query:   58 VYMVASSWDETSATSTLRRTGQAWNTQYLALDGTDAYSDVIDRVTMFPGTPSGR--WVE-------FEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHV 384
            ++ +  +W ET AT+T+   G +W + Y+ +D  DA +           TP     WV        F++T+AV  W++    N GLL++ ++E+  G  +R +S  ++DS   P + V
Sbjct:  342 LHRMLRAWSETEATATMSMAGTSWTSPYVGIDDVDAVA-----------TPDAELLWVHEDYGDKGFDITDAVNGWLANPSSNFGLLLRADNEESSGWQMRIHSREHTDSVLRPTLVV 448          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI00138FC94C5.350e-2143.51uncharacterized protein LOC116617085 n=1 Tax=Nemat... [more]
UPI00138FC51C1.490e-1741.98uncharacterized protein LOC116617081 n=1 Tax=Nemat... [more]
A0A6S7KVV1_PARCT1.670e-1440.80Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A1F9L3K1_9DELT1.760e-527.97Uncharacterized protein n=2 Tax=unclassified Delta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1contigD-dichotoma_M_contig1:49196..56691 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1859
Cds size447
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1.1.1prot_D-dichotoma_M_contig1.1.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1 49259..55342 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927464.1399121-UTR-D-dichotoma_M_contig1:49195..492581622927464.1399121-UTR-D-dichotoma_M_contig1:49195..49258Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1 49196..49258 +
1690797979.0665674-UTR-D-dichotoma_M_contig1:49195..492581690797979.0665674-UTR-D-dichotoma_M_contig1:49195..49258Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1 49196..49258 +
1622927464.183674-UTR-D-dichotoma_M_contig1:55342..566911622927464.183674-UTR-D-dichotoma_M_contig1:55342..56691Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1 55343..56691 +
1690797979.1709075-UTR-D-dichotoma_M_contig1:55342..566911690797979.1709075-UTR-D-dichotoma_M_contig1:55342..56691Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1 55343..56691 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927464.15435-CDS-D-dichotoma_M_contig1:49258..494291622927464.15435-CDS-D-dichotoma_M_contig1:49258..49429Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1 49259..49429 +
1690797979.0960732-CDS-D-dichotoma_M_contig1:49258..494291690797979.0960732-CDS-D-dichotoma_M_contig1:49258..49429Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1 49259..49429 +
1622927464.1684067-CDS-D-dichotoma_M_contig1:55066..553421622927464.1684067-CDS-D-dichotoma_M_contig1:55066..55342Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1 55067..55342 +
1690797979.1223354-CDS-D-dichotoma_M_contig1:55066..553421690797979.1223354-CDS-D-dichotoma_M_contig1:55066..55342Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1 55067..55342 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1.1.1

>prot_D-dichotoma_M_contig1.1.1 ID=prot_D-dichotoma_M_contig1.1.1|Name=mRNA_D-dichotoma_M_contig1.1.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=149bp
MVASSWDETSATSTLRRTGQAWNTQYLALDGTDAYSDVIDRVTMFPGTPS
GRWVEFEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSA
YHPYIHVLCREGISTTIGPIPIDPVDDDPNPIQPVDDDDGCYHGSHPC*
back to top

mRNA from alignment at D-dichotoma_M_contig1:49196..56691+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1.1.1 ID=mRNA_D-dichotoma_M_contig1.1.1|Name=mRNA_D-dichotoma_M_contig1.1.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=7496bp|location=Sequence derived from alignment at D-dichotoma_M_contig1:49196..56691+ (Dictyota dichotoma ODC1387m male)
CACAAAGCGAGCTTCTACAGCGAGGATGAGTGCCCGTACGTGGAACATGA GGCAGAGGTATACATGGTTGCTTCGTCGTGGGACGAAACCAGCGCAACTT CAACCCTCAGAAGAACGGGACAAGCGTGGAACACACAGTACCTTGCACTC GATGGGACGGATGCCTACTCGGATGTAATCGATCGGGTAACTATGTTTCC TGGGACACCGAGTGGTCGCTGGGTGGAATTCGAGGTATGTGATGGATGGC GCGACCGTCTATCTTGCGTCGCCCTTAGTTGTATTATTTCTATGTTGTCT ACCGGGAAGTCAATAAGGCAGTCTAAGCTAGCATTTGGTGGTGGTGATCC CAACCAACGGGGGACTAGGTAAGTGATGGCTTCTAGTCAATCGCGGTGCT GCAAATACTCGATTGGACATGAAAGTATAAGAACTTCTTCAGGTGGAACG TATAGCAACGCTTCGCATGTGACCATACGCTGAAAGGAATCCCTCCCTTT ACAGGGCTCTCAGACTGCAGTTTTATCATCTTCGTTAAACATGAGCACCA AGAGCCTCACGCTCCACAGAAAAGACGGGAGAAAACCACGTAGGCTACTG TATCGTGGACCTTCTACGTATAAATCATGAAACTATGCACATTCTTGCAC TGAACAGCAAGTTTACTAATCTCACCATCTGTCACCAACCATAGGACAAA CCTTCCTTGCCAACCAACTATGACACTTCAAATCATTATAAAGTAAGTAC TGAACCATATACTTGACTTGAAACAGACTCCAGTCGAACCCTCGTAGTGT TGCGATTCGAACCCCTGTGCCCAAAAGAACCACGGCAGCACTTCGAAAAT ACTTGAACCATTCACTCACCTATTTTAGGAGGCGCTAGTCGAACCCTCGT AAGTTGCGATTCGAAGCCCTGTTCGTGGCGTGAGTATGGGCTGTAGGAAT TCATGCCCCCAGTGCCATAAACGACGACAAACGATTTTGACGCTGAGAAG AAAGAACCGTCCCTCTTTCCGCAACCAGTATGACGAGGGTCCATTCACCC AGCAATGATTCCAATCATGGTCGTGGTTTTCATCCCAATCTGGGGTAGAC TTGGTGAGTTGAGGCTTCCCAGTGGCGCTTGAGGCTGATCGTCTTCCCGT GGGAGACTCTCCAAGATACTGGAAGGTGACAAAGATCGGATGTTGGATTA CATGGGTTCTCAGCCTCAGGTTGTCGGCCGGGTCAACATCATCTAAACCA AACGTTTGAAGGGGATAGGCTAGGTCGACGTTCGTATATTCACGAATCGA AAATCGGGGGAGGATGACCTGGTACGTCTTCTACCACAGCATTGATTCAG ATGGCTGTGTTTTGCGGCAGACAGGAATTATCTCTAACTCCTCAACGTTC GGGCTAGCTCGTCGGAGATGGTCACAAAATACGCTTTAATTCTGTAATAG TCGACCTGTGTGTGGATCTGCACCGACTGGACAACGTGTGTGTGTGTGTT TTATGTATGCGAAAGGCGCAAGCCCCATCGCAGCTGTGGGGAGTATAGTA TAGTATAGTCTAGTACTGGTTTACATGGGGGAAGAAATAAACGAAGGGCG ATACGTCAAACAACGAGGTTCTCAAGGGAACGGACAACCGATGAACCATA TTCTTATACCCTGCTGCTCAAATTCACATCCCTGTGTTTCGGATGGACCC ATGCGCTTTTTTTCTCGTATTTTTCCCCGTCATTTTTTTCCGCAATTAGT TTTTGCTCTTTCTGCTATATTGCAATTTTTTTTCTCAATTTTTCGTCGGA TTTTATCTTCAATAGTTTCTCGTCGTTCCTCATCCGCTGTGAGGTTAAAG AAACACCGACTGAAAAAAAGTGAGTGGGAATTGAGCAAGATCATCGTGAA CATTGAAGCCCGAAAATTGGAAAGATAGCTTAAATAGGAGCAAAAAGGAA GTGAGTAAAATCATCTTCTCGTTTCACTCGTCATACTCCAGACAGGATTC GCTTGGCAGTTCTTCTAACCTTTGCTGTTCACTGTTCCACTTCCACTCAC TGACGTGCAATTTATCCTAGCCCACTCTTCTCCATTAACAATGATTTCGT TTACTCTTTTTCTCGCTGAGTTTTCTAACTTCCACCCGACCGCCTATTGC TCATGTCGAGATGAACCGATATGCGTTGGTCAGGTGAAGCTGCCTCGTGC TTCGGCCAAGCGTTAGTACCCATGGTTGGGATCACGTGTGATGGACTAGC GAGCAAGACCGAGCATTGGTGGATGTCTCAGAAGCTCATGTTAGCTCGTT AGGGTACCGAGATGAAGTGATTCTTGGTGCGTCGCTCCTTGCTAGAGCAC GACATTGCGTACCTCGATCCCTTAAAAGAGGTTTGGCTCCCTGATAGACA GACACTAGCATGTAGGAAGAATCTTTGGGTACCCGTATGCATGTCCTTCC CTGGTAGTGGCTTTGGTGGTGTTCTTCGCTGTCGCCGTGGTTGCGGTATG CGGCGTAATGCCCCTGAAGTTATCTCATGCATTTCTTACTCGTCGGTAAC GAGGCTGGGCACATACCTTTTTCGCGCGGTTGAGCATTATATATAGTTTT CCCAAATACGATTACACAGTTACACATGGCTCTCTCCGACAGTCTGTACA TCGAGGGATAGGGCGAGAGACTGAGAATTTGGGGACCTCGACAAGGCTAT ATACCCAGTGTGCGTTCGACTTCTTGTACGCACGCGCTTATATTCTCTTC AGGTTCCGTGTTATCTACAACGCGCATGTAACGGAACGTTTCGTTGGTCA AAATATCAGTAAGTAATCCCATCAAAGAAACGGCCGCCACAAAGACGCCC CCCTTTTCTTTGCTCGCGATTCGTTTCTCGCTATCCACTGCTTCCTGTTT TCATGAATCACTCAACTTATCATCGTTTCATGTGTCGTGTTCTTTTGTCA CTTAACAGCCTCTAGGTGATATTGACACTCTACCATATATATTTGAAGCT TCTATCTTTTATCGACGCATGAGACCACGAGAACCCCGAATAGTAATATA ACGTCGTCATCCCCTTCAAGCCCTTGCCTACACGAACACTATGGTACTAC CAGCTTTTCAATCGACCGTGTTGAGCACGAAGTTTGATGAAACATATCGC AAAGATTGCGGACGTGGCTCCAGATCTTCCAGCAGCAAACTCTACACCAT AACTCTCGCTAGACGGTGTGGATTTGAAATCTGGCGGTACCACAGAGTTC GCATTGGCGACGACTTTAAAGGGGCCGTGTTGCATGATTATTCGGGGTTC CCGTTGTCTGATGTGCCAAAATAGGTAGTGGCAGGGGCTGCTTCAATTAT TACTAAGAGCTAAAATATCATCACCAAAAATCTTTTAATATGCTGTTACA TAACGTTCAATGTTGACGCTACTTTCGTGCTGCTCTCGGAGCCCAAGCCT TCTTCGACATAAAAGGTATGCAGAGAACGTCAAACAATCGAATGAAGTGA TCATCCCCGTCAAGCCGTTGTTCATACGGTTGCTACTGTATTTCCAGCTT ATGGATTGACCCTGTTGAGCGCGAGATACGGCGAAAAATGTGGGGAAGGT TGTGAAGGTAGTTCCAGGACTTACAAATAACAACGCAAAAAATCCACTTC ATCTCCCGCGAGACGTACGATATCAATTCAACATATTTGGAATAACAGAG TTCGAATGGGCAAGGGGTTTCAGAGGTAATGATTTGATATGGTTATCCGT AGTTCTCTGTCGCTGTCATGGTGAAAGATTTGGAGTCTATCCTCACAAAA CTTGTGTGTGCTGTTTCACATACAACAGTATATTGGTGAGATGGACTCTC GATTACGAAAAGGACTCTGATATGGTTTTCGGCGATTTAAAGGGTGAAGA CGTCCGATTGGGATCTTTCACGGTGGAACATTTTTGACCGCCTTGACAAC GCGGTCATTTCGGTGCATTTGTTTTTTAAATCGTACATGTCCTTCGCAAG ATATTGGGCATACGCGACAGAAATATGAGGAAATGGTTCCAGGATTTGGA AGCTGAAAGCGTTCGCCTCGATGATTGCCATGAATTGGAAGGGTGTCCGA TACCGATGGCAATACTATCAAAATGACCGCATTGTCAAGGCGGTCAAAAA TGTTCCACCGTGAAAGATCCCAATCGGACGTCTTCACCCTTTAAATCGCC AAAAACCATCTCAGAGTCCTTTTCGTAATCGAGAGTCCATCTCACCAATA TACTGTTATACTAGTCATTCTCTACGGTCATTCTCTTTCAAGTTTGCTGC CGATGTTCTCGCTTTTCACTTCAATCTAGTGTGCAACGGTCGATTATCAA GGATGAGTCCTGAGTTTAAAGTGCGCATGCTTTTACTTGCTCCAGGTGAA GAAAAAAAGAGACGTTGAAGGGGTTCCTTGAGGTAACCAGGATGATGTCG TACGAATTCGGTAGTTGGTTACAATTGTAATTACTCCGCAACTTAGTTTA GTGCAAGCCTTGTTTGCGTGGAATCCCCATCTTTCGCTGCAAGATTCAAG CTGACGCTAAATCATCATGTGATAACATCTCATAGAATCGTGCCTTTATT CTGCGATAGTTTTCATCGTGGGCGGTCGGTCCCCCTTACATTCTCGGCTT TTTATATACTCAAGTGCATGATACATATGTCTATCCTTATCCGTGAAAGA CGAGCAGATTGGGCAGTACAGTATCTCAAACGACGAGTTCCCAGTAGTAG TAGAGTTACTTATGGCTGATTTGCTTGTTATAAGTCCCAATGTGTGGTTG GCACAAGTGTATTAGTTGTTAATCTCCTATCGAAACCGTGGTAGTGGTGG TGGTGGTGGGAGTGCTACGGTTAACCTTTGAAGCGCCCTGGTTGGGTTCG TCTATACTAAAATCGAGATTGGAAACCCAACTCAGCGTCAGAAGGGTTAA CGGTGGAAGACTTACGAGTAGTGCGCAATGAGGCAGCAACCTTAGGTGTC CGAGGAGCTAAATGGATCCACCACACTATATGACGGTCGAACATAATAGA TGACACCAAATTTACGGAGAAAAATCGCAGAAATTTACCCATAACTCAGC AAATACGCATGCATGTGACTTTCTTCTAGTGCTTCGTGTATTATCGCGTT CTCTGGGTCTTTGCCAATAATCGAAGTGTAGACGGGTGGCGATTGAACCA ATATTATTGCGTGAGTTCTGGCCTTTCAAATATTTCAGATCAGGTGTCAT TTCCAGAAGCAGACAGCTACTGTATACTGGCTTCTGTACACTACTTTAAG TCAGCACTGACTTACTGATGGAGTGGATTCATTTGCTCACTCTGACAAAA TAGCTAGTCCGTTTGGATCTGAGTCCTGCCCTTAGTCCACGGGTTAATTG TCATCCCTGTGATCAGCGCTACCCTCTTTATGCGGTCGTCTCTCCGTAGG GGCCGAATCGTCGCTACTGGCCCCTTGAGGTCTTGACAGCTCACTCCTTG CCTAGTTTCGATTCGCTTGTAGCACCGGGTATAGGTGTGACGAGGAGCGA CGCACCTGACGTGTCAGCTGTCCTTCAGAGGCACGGGTACCCTGCTTACC ATGGATACGTGAGACATTTTGTCACAGTGTTTAAACAGAACACGAAACGA ACAGCATCAGCATCGCGTCTCTGTGGCATGCGCAACACAATCCCAATCAT ACCAAGAGTATAATCACCCAAATTGATCGATTCAACTGCTGGGTAGTCAG CGCGTGGCGACTTCCTTGAAGGGAGAATAGTTAATGACAAGAAAACTTCA CTCAAATTTCACCTTATGTACTGACAAGGCGGCTCGTGTGTTGCGATTCT TATGTGCTGGACACCGTGTAGGTTACCGAAGCGGTGGAGAAATGGGTATC GGAGGGGTATGACAACAACGGTCTCCTCGTCAAGGTTGAGGATGAGGACA TTGAAGGCCGCGATCTACGCTTCTACTCTTCTGCCTATTCCGACTCGGCA TATCATCCCTACATCCACGTGCTGTGCCGGGAGGGAATCAGTACTACAAT TGGACCCATCCCGATTGATCCGGTAGATGACGATCCCAACCCGATTCAAC CGGTGGATGACGACGACGGCTGTTATCATGGTTCACATCCCTGCTGAATA GGGGACTTAAGAACCGTATGAGAGGATCCTGTGATGGTTCCGTCTGAATT GCGGCAAGACAATAGAACTACAGGTGGTGGTGCCATCCGAGTGCTTGGTT TTAGCTCATCTATCGATGCAGCTGTTACTTCTTTTCGTTCCAATCCTCGA GTACTACTCCAGAAGATCGAACGTTCTAGAGGGCAAATCTCTACCGATCC ATCAGTTCAGCAGACATCTCGTGATAACTGAGAGCAAGAAGGAAGAAGGT CGCGATCATGATCATCGATGCTCGTATCCTTCGGCGGCTTTAAATTTGAC ATATAAAGAGCTTCCTTCAATGAGCTTGCCGAAAACCTTCGTCTGACAAA GATGGAACGCATGGTTCTGATACCGAAGCAGTTGTACTTGTGGCAGTTGG AGAGGAATCAATGGTACGTATACTGCATGTTGAAAGGTAGCAGAAAAAGC ATCGGTGTTGGCCTAGGATGGTCCTGGAGCAAGTATGATCTTCGTAGGTC GGGGTCTTCCTAAGCAATCTATCCTCCCAGTGGTGGGCTGGCCAAAGCCG TAGGGAAATGCATTGGCAGGATGCAACATTGTTTTCGTTCAGTGGGAGTC CTTGCCGAAACTGGATAATCTACGTGCTGTCAAGAGGTGTAGTTCAGGAA GAGTGAAGATGTTACGCATGCCTGATTCTCGCCGGATGATCGATGCTTCT CCTTCAGCCCTAGGAGAAAATACTGATAGGATATATAACGAGGAATTTCG ATGTGTGTGGGGGGTTCTTCGCTTCACCCGAGGCACACATTGTAAATGGC CACAAACAGGGAAACATAGAACCGAACGCATAACGTTGTGGCCGTGACAA TTACACGGTGGCTACGGATATATGACTCGCGGTGGAGCACAGCTAAGGGA AGGTTGCTGAGTACAGAAGTTTGGACGGAAGAATGGCTTCGTGTGCCACC GTGCACGTGGGATACCTGAGGCGTCATCGCAACAAGGTACATTCCTTGTG TACCGTGATCGATGCACAAGGCTCGCCTAGGTCTGTTTTGCGACGTTTTT CAGGATGTTGGACAACAGATTATGATATCATCTATCTCCCGTCTAGCCGC GTGAATTCACTTTGCCAATTGAAGTTTTATTGTAGATGGTGGGCCTAGTT TAGGACTCCCACCAGGGTGCCATACTGTATTGCTAGTGCACGTCATATTT TGCGATCAAATGATTGTCTGCCTTGGGGGCAAGGAGGTGCAATTTGCAGT CAGGAGGCTATGGGCGACCCAGAGGTAGCCCCTAGACGGTCACCTCTTTT TCAGGTTGGCATGTAGGGCAATCATCAGTCTCAAATGAGTTCGAAC
back to top

Coding sequence (CDS) from alignment at D-dichotoma_M_contig1:49196..56691+

>mRNA_D-dichotoma_M_contig1.1.1 ID=mRNA_D-dichotoma_M_contig1.1.1|Name=mRNA_D-dichotoma_M_contig1.1.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=894bp|location=Sequence derived from alignment at D-dichotoma_M_contig1:49196..56691+ (Dictyota dichotoma ODC1387m male)
ATGGTTGCTTCGTCGTGGGACGAAACCAGCGCAACTTCAACCCTCAGAAG
AACGGGACAAGCGTGGAACACACAGTACCTTGCACTCGATGGGACGGATG
CCTACTCGGATGTAATCGATCGGGTAACTATGTTTCCTGGGACACCGAGT
GGTCGCTGGGTGGAATTCGAGATGGTTGCTTCGTCGTGGGACGAAACCAG
CGCAACTTCAACCCTCAGAAGAACGGGACAAGCGTGGAACACACAGTACC
TTGCACTCGATGGGACGGATGCCTACTCGGATGTAATCGATCGGGTAACT
ATGTTTCCTGGGACACCGAGTGGTCGCTGGGTGGAATTCGAGGTTACCGA
AGCGGTGGAGAAATGGGTATCGGAGGGGTATGACAACAACGGTCTCCTCG
TCAAGGTTGAGGATGAGGACATTGAAGGCCGCGATCTACGCTTCTACTCT
TCTGCCTATTCCGACTCGGCATATCATCCCTACATCCACGTGCTGTGCCG
GGAGGGAATCAGTACTACAATTGGACCCATCCCGATTGATCCGGTAGATG
ACGATCCCAACCCGATTCAACCGGTGGATGACGACGACGGCTGTTATCAT
GGTTCACATCCCTGCTGAGTTACCGAAGCGGTGGAGAAATGGGTATCGGA
GGGGTATGACAACAACGGTCTCCTCGTCAAGGTTGAGGATGAGGACATTG
AAGGCCGCGATCTACGCTTCTACTCTTCTGCCTATTCCGACTCGGCATAT
CATCCCTACATCCACGTGCTGTGCCGGGAGGGAATCAGTACTACAATTGG
ACCCATCCCGATTGATCCGGTAGATGACGATCCCAACCCGATTCAACCGG
TGGATGACGACGACGGCTGTTATCATGGTTCACATCCCTGCTGA
back to top