prot_D-dichotoma_M_contig1.1.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1.1.1
Unique Nameprot_D-dichotoma_M_contig1.1.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length149
Homology
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: UPI00138FC94C (uncharacterized protein LOC116617085 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC94C)

HSP 1 Score: 85.9 bits (211), Expect = 9.190e-18
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    2 VASSWDETSATSTLRRTGQAWNTQYLALDGTDAYS-DVIDRVTMFPGTPSGRWVEFEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHVLC 109
            V   W+E  A +  R +   W+  YL LDGTDA +       TMF   PSG +VEF+VT AV+ W   G  N GL+V+V+DE ++GR LRF S+A  DS +H +IHV C
Sbjct:  120 VLKPWNEGQANTRYRMSNYPWSQLYLGLDGTDAENMPQSPSTTMFSYRPSG-FVEFDVTRAVKDWAG-GSPNYGLVVRVKDESVDGRGLRFASNADPDSQHHAFIHVKC 226          
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: A0A6S7KVV1_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KVV1_PARCT)

HSP 1 Score: 75.9 bits (185), Expect = 1.140e-14
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    2 VASSWDETSATSTLRRTGQAWNTQYLALDGTDAYSDVIDRVTMFPGTPSGRWVEFEVTEAVEKWVSEGYDNN-GLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHVLC 109
            V  SW E+ ATST R     W++Q+L L GTDA S  +    + P TP G W   +VT+  + W    Y +N GLL++   E ++GRD RF S+AYSDS+ H YI + C
Sbjct:   18 VLKSWIESQATSTKRNNFANWDSQWLNL-GTDANSVALYSTKVTP-TPGGIWYTLDVTQQAQDWK---YGSNYGLLLRDTHEQVQGRDFRFASNAYSDSSKHAYITLRC 121          
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: UPI00138FC51C (uncharacterized protein LOC116617081 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC51C)

HSP 1 Score: 77.4 bits (189), Expect = 1.480e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    2 VASSWDETSATSTLRRTGQAWNTQYLALDGTDAYS-DVIDRVTMFPGTPSGRWVEFEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHVLC 109
            V   W+E  A S  R +   W+  YL L+  DA +       TMF   PSG +VEF+VT AV  W + G  N G++V+V++E +EGR LRF S+A  DS  H YIHV C
Sbjct:  118 VLKPWNERQANSGYRLSRIRWSQMYLGLNNIDAEARPQSPSTTMFSFRPSG-FVEFDVTRAVRDW-ARGSPNYGVVVRVQNESVEGRGLRFASNADRDSKRHAYIHVKC 224          
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Match: A0A1F9L3K1_9DELT (Uncharacterized protein n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9L3K1_9DELT)

HSP 1 Score: 57.0 bits (136), Expect = 1.170e-6
Identity = 33/111 (29.73%), Postives = 55/111 (49.55%), Query Frame = 0
Query:    6 WDETSATSTLRRTGQAWNTQYLALDGTDAYSDVIDRVTMFPGTPSGR--WVE-------FEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSAYHPYIHV 107
            W ET AT+T+   G +W + Y+ +D  DA +           TP     WV        F++T+AV  W++    N GLL++ ++E+  G  +R +S  ++DS   P + V
Sbjct:  349 WSETEATATMSMAGTSWTSPYVGIDDVDAVA-----------TPDAELLWVHEDYGDKGFDITDAVNGWLANPSSNFGLLLRADNEESSGWQMRIHSREHTDSVLRPTLVV 448          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI00138FC94C9.190e-1845.87uncharacterized protein LOC116617085 n=1 Tax=Nemat... [more]
A0A6S7KVV1_PARCT1.140e-1443.12Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
UPI00138FC51C1.480e-1444.04uncharacterized protein LOC116617081 n=1 Tax=Nemat... [more]
A0A1F9L3K1_9DELT1.170e-629.73Uncharacterized protein n=2 Tax=unclassified Delta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001111TGF-beta, propeptidePFAMPF00688TGFb_propeptidecoord: 31..94
e-value: 2.0E-7
score: 31.0
IPR010671Disaggregatase-related repeatPFAMPF06848Disaggr_repeatcoord: 5..107
e-value: 6.8E-10
score: 38.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1contigD-dichotoma_M_contig1:49259..55342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1.1.1mRNA_D-dichotoma_M_contig1.1.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1 49196..56691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1.1.1 ID=prot_D-dichotoma_M_contig1.1.1|Name=mRNA_D-dichotoma_M_contig1.1.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=149bp
MVASSWDETSATSTLRRTGQAWNTQYLALDGTDAYSDVIDRVTMFPGTPS
GRWVEFEVTEAVEKWVSEGYDNNGLLVKVEDEDIEGRDLRFYSSAYSDSA
YHPYIHVLCREGISTTIGPIPIDPVDDDPNPIQPVDDDDGCYHGSHPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001111TGF-b_propeptide
IPR010671Disaggr-rel_rpt