mRNA_D-dichotoma_M_contig1112.967.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1112.967.1
Unique NamemRNA_D-dichotoma_M_contig1112.967.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 3.810e-47
Identity = 114/261 (43.68%), Postives = 149/261 (57.09%), Query Frame = 1
Query:  724 NAVLLAGEQGLPPECADPLREIVLGLSLGAFRRALV-GDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYS 1503
            +AV  A   GL       LR I+      AFRR L  GDP A V+ + V  KPG   V+ARPRVY+  KTAWL          G+V    QA ++S AM  P     R+V+D+RA N+ V +    +P  E   A L  A    +LD++Q Y Q PL P+A+E+FT+ + GGLYTP RVPQG+LNAT+YFQA +T  L G+    C VWVDDV+    D   LLD ++++L+ L   GL  AA K  FF   I WCG++YS
Sbjct:  712 SAVSSAAAAGLEEPHVGRLRGII-SERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWLAG-------LGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGL---NCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYS 961          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 9.240e-47
Identity = 108/263 (41.06%), Postives = 147/263 (55.89%), Query Frame = 1
Query:  727 AVLLAGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGS----SCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYS 1503
            AV  A + GL P   D LR++V       FRR + GDP A V  M V+ K G   V+AR R Y+  KT WL      L   G+V    QA ++S  M+ P  S    + R V D+RAVNR + +S  P+P LE     L  A    +LDM+QGY   PL P+A+E+FTM+  GGLY+P RVPQGVLNAT+Y+Q  M   L  +    C+VWVDD++        LL+ ++++L      GL  AA K  F+   ++WCG++YS
Sbjct:  605 AVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYS 863          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 5.570e-39
Identity = 98/226 (43.36%), Postives = 129/226 (57.08%), Query Frame = 1
Query:  847 RVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSC------RIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSG 1506
            +V+ + +  KPG   V+ + RVYS AK  WL      L   GMVV+T QA ++S AM VP           R+  DY   N    +  + +P  E   +ML GA     LD++QGY Q PL   ARE+F++ +  GL+ PTRVPQ VLNAT YFQAVMT+ LQG+    C VWVDD I    D   LL+ ++ +L  L   G+ AAA K  FF  +IRWCG++YSG
Sbjct:  393 KVEPLKMTLKPGVQHVQEKARVYSPAKATWLSGCMAALVAMGMVVKTIQAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGL---NCAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSG 615          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.610e-33
Identity = 96/258 (37.21%), Postives = 135/258 (52.33%), Query Frame = 1
Query:  724 NAVLLAGEQGLPPECADPLREIVLGLSLGAFRRAL-VGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGR 1494
            +AV  A   GL       LR I+      AFR  +  GDP A V+ + V  KPG   V+ARPR Y+  KTAWL          G+V    QA  +S AM  P     R+++D+RA N  V +    +P  E   A         +LD+++ Y Q PL P+A+++FT+ +  GL+TP RVPQG+LNAT+YFQA ++  L+G+    CLVWVD V+    +   LL+ ++M++E L   GL      A F R      GR
Sbjct:  486 SAVSSAVVAGLDEPHVGRLRSIIRE-RWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAYCQRPLSPEAQKIFTIATPRGLHTPKRVPQGILNATSYFQATLSRILEGL---NCLVWVDGVVNRGMEEDDLLNTLDMIVERLDGAGLTWPPTNARFLRPASHGAGR 739          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A6A4B2T5_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4B2T5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 9.700e-32
Identity = 84/258 (32.56%), Postives = 133/258 (51.55%), Query Frame = 1
Query:  739 AGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVV-PNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSGE 1509
            A ++G P E    LR I     +  +R  L  DP ARV  M +R KPG    R +PR Y      +L++   +L   G V   +++ ++  A+ V   G   R  ADY+ VN  +      +P L+     + GA      D I+GY Q  L  + +E  + ++   +YTP RVPQG  +A  +FQ+ +   L+ ++ +  LVW+DD+++ A DA T L ++E + E L   G   +A K+  F RE+RWCG++ SG+
Sbjct:   38 AVQKGFPKESVPRLRRIATRYDI--WRLRLGDDPPARVPPMKIRLKPGAKPYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTGGEFRQTADYKPVNGDMEAIVGVMPNLQTDLECVKGACFFGLFDFIKGYWQLALAEECQEWLSYMTHRKVYTPRRVPQGCTDAALFFQSTIQKCLEELLNKHLLVWIDDLLLFASDASTYLSKLERLFELLDFFGFKLSAKKSSLFEREVRWCGKLISGD 293          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A6A3GK08_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GK08_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.810e-31
Identity = 83/258 (32.17%), Postives = 133/258 (51.55%), Query Frame = 1
Query:  739 AGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVV-PNGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSGE 1509
            A ++G P E    LR I     +  +R  L  DP ARV  M +R KPG    R +PR Y      +L++   +L   G V   +++ ++  A+ V   G   R  ADY+ VN  +      +P ++     + GA      D I+GY Q  L  + +E  + ++   +YTP RVPQG  +A  +FQ+ +   L+ ++ +  LVW+DD+++ A DA T L ++E + E L   G   +A K+  F RE+RWCG++ SG+
Sbjct:   38 AVQKGFPKESVPRLRRIATRYDI--WRLRLGDDPPARVPPMKIRLKPGAKPYRCKPRKYPPEVRRFLDDFNAELVRLGWVYENTESRWACPALPVRKTGGEFRQTADYKPVNGDMEAIVGVMPNIQTDLECVKGACFFGLFDFIKGYWQLALAEECQEWLSYMTHRKVYTPRRVPQGCTDAALFFQSTIQKCLEELLNKHLLVWIDDLLLFASDASTYLSKLERLFELLDFFGFKLSAKKSSLFEREVRWCGKLISGD 293          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A2P4YDS0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDS0_9STRA)

HSP 1 Score: 139 bits (349), Expect = 4.020e-31
Identity = 83/262 (31.68%), Postives = 140/262 (53.44%), Query Frame = 1
Query:  730 VLLAGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVP---NGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSG 1506
            V+ A ++G      + LRE++       +R  L  DP A+V  + +  +      R   R YS A+ ++L  +  +L   G V R  ++ ++  A+ V    +  S RI  DYR VN+L V  A  +P L+ V   + G+      D+++G+ Q PLHPD++EL + ++   ++TP RVPQG ++++ +FQ  + D  + ++GR CL+W+DD+II A  A   +  +    E +   GL     K+V F +E+ WCGR+ SG
Sbjct:  466 VINAVKEGFDHAEMESLRELLKEFR-DTWRDKLGPDPPAKVAPLKITLREDAVPYRCHARKYSPAQRSFLRAYTQELVDFGFVRRNDKSRWACAAVPVRKVGSADSFRITNDYRPVNKLTVPIAGVMPNLDVVLDQVSGSYGFAKFDLMKGFWQMPLHPDSQELMSFMTEDSVFTPLRVPQGAMDSSVHFQNQLQDVFRELLGRHCLIWIDDIIIYAASATEFIVVLRRFFELVQEHGLKLNVNKSVIFCKEVAWCGRLVSG 726          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: H3GLY9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLY9_PHYRM)

HSP 1 Score: 138 bits (347), Expect = 6.210e-31
Identity = 95/265 (35.85%), Postives = 135/265 (50.94%), Query Frame = 1
Query:  736 LAGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVV-PNGSSC------RIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSGE 1509
            +A E GL  +    LR I L      FR      P  RV  M VR + G   VR++ R YS    A+L+ H   L   G++ +  ++ ++S   +V   G +       R+  D R+VN        P+P  E V   L GA     LD  +GY Q PLHPD++EL++ V+  G+YTPTRVP G  +A AY Q ++ +    ++G   L W+DD++  A D   LLD ++ VLE     GL   A K  FF REI+W GR+ SG+
Sbjct:  621 VAEELGLTLDGTAKLRGI-LHARADNFRVEFGHAPPVRVAPMKVRLREGAAPVRSQLRRYSPNDRAFLDRHTASLLKYGLIYKNHRSRWASAPRIVRKKGQNVDPTADPRMTIDTRSVNERTEPMPWPMPVQEVVLGELEGAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQGIVEEIFGDLLGVSVLAWLDDILGFAEDDDALLDVLDTVLERCEKFGLKLHAKKCQFFSREIKWSGRMISGD 884          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: H3H7W2_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7W2_PHYRM)

HSP 1 Score: 136 bits (342), Expect = 2.530e-30
Identity = 95/265 (35.85%), Postives = 134/265 (50.57%), Query Frame = 1
Query:  736 LAGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNG-------SSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSGE 1509
            +A E GL  +    LR I L +    FR     DP  RV  M VR + G   VR++ R YS    A+L+ H   L   G+  +  ++ ++S   +V          +  R+  D R+VN        P+P  E V   L GA     LD  +GY Q PLHPD++EL++ V+  G+YTPTRVP G  +A AY Q V+ +    ++G   L  + D++  A D   LLD ++ VLE     GL   A K  FF REI+WCGR+ SG+
Sbjct:   51 VAEELGLTLDGTAKLRGI-LHVRADNFRVEFGHDPSVRVAPMKVRLREGAAPVRSQLRRYSPNDRAFLDRHTASLLKYGLNYKNHRSRWASAPRIVRKKEQDVDPTADPRMTIDTRSVNERTEPMPWPMPVQEVVLGELEGAKVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQCVVEEIFGDLLGVSVLALLADILGFAEDDDALLDVLDTVLERCEKFGLKLHAKKCQFFSREIKWCGRMISGD 314          
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Match: A0A2P4XQ32_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ32_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.600e-28
Identity = 79/262 (30.15%), Postives = 135/262 (51.53%), Query Frame = 1
Query:  730 VLLAGEQGLPPECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPRVYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVP---NGSSCRIVADYRAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*QTPLHPDARELFTMVSAGGLYTPTRVPQGVLNATAYFQAVMTDKLQGMIGRRCLVWVDDVII*ARDAGTLLDRIEMVLEWLLLRGLLAAALKAVFFRREIRWCGRIYSG 1506
            V+ A ++G      + LRE++       +R  L  DP A+V  + +  +      R   R YS A+ ++L  +  +L   G V R  ++ ++   + V    +  S RI  DYR VN+L V  A  +P L+     + G+      D+++G+ Q PLHPD++EL + +    ++ P RVPQG ++++ +FQ  + D  + ++GR CL+W+DD+II A  A   +  +    E +   GL     K+V F +E+ WCG + SG
Sbjct:  268 VINAVKEGFDHAEMESLRELLKEFR-DTWRDKLGPDPPAKVAPLKITLREDAVPYRCHARKYSPAQRSFLRAYTQELVDFGFVRRNDKSRWACAVVPVRKVGSADSFRITNDYRPVNKLTVPIAGVMPNLDVALDQVSGSHGFAKFDLMKGFWQMPLHPDSQELMSFMREDSVFKPLRVPQGAMDSSVHFQNQLQDVFRELLGRHCLIWIDDIIIYAASATEFIVVLRRFFELVQEHGLKLNVNKSVIFCKEVAWCGHLVSG 528          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1112.967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE3.810e-4743.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE9.240e-4741.06Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE5.570e-3943.36CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JCK9_9PHAE6.610e-3337.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4B2T5_9STRA9.700e-3232.56Reverse transcriptase domain-containing protein n=... [more]
A0A6A3GK08_9STRA3.810e-3132.17Reverse transcriptase domain-containing protein (F... [more]
A0A2P4YDS0_9STRA4.020e-3131.68Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
H3GLY9_PHYRM6.210e-3135.85Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H7W2_PHYRM2.530e-3035.85Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A2P4XQ32_9STRA1.600e-2830.15Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1112contigD-dichotoma_M_contig1112:212927..214461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score68.2
Seed ortholog evalue4.8e-09
Seed eggNOG ortholog164328.Phyra85588
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1509
Cds size570
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1112.967.1prot_D-dichotoma_M_contig1112.967.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1112 213536..214131 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927626.7595797-UTR-D-dichotoma_M_contig1112:212926..2135351622927626.7595797-UTR-D-dichotoma_M_contig1112:212926..213535Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1112 212927..213535 +
1690798068.3778567-UTR-D-dichotoma_M_contig1112:212926..2135351690798068.3778567-UTR-D-dichotoma_M_contig1112:212926..213535Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1112 212927..213535 +
1622927626.8048668-UTR-D-dichotoma_M_contig1112:214131..2144611622927626.8048668-UTR-D-dichotoma_M_contig1112:214131..214461Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1112 214132..214461 +
1690798068.4142911-UTR-D-dichotoma_M_contig1112:214131..2144611690798068.4142911-UTR-D-dichotoma_M_contig1112:214131..214461Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1112 214132..214461 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927626.772253-CDS-D-dichotoma_M_contig1112:213535..2136471622927626.772253-CDS-D-dichotoma_M_contig1112:213535..213647Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1112 213536..213647 +
1690798068.394042-CDS-D-dichotoma_M_contig1112:213535..2136471690798068.394042-CDS-D-dichotoma_M_contig1112:213535..213647Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1112 213536..213647 +
1622927626.7834594-CDS-D-dichotoma_M_contig1112:213673..2141311622927626.7834594-CDS-D-dichotoma_M_contig1112:213673..214131Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1112 213674..214131 +
1690798068.4056726-CDS-D-dichotoma_M_contig1112:213673..2141311690798068.4056726-CDS-D-dichotoma_M_contig1112:213673..214131Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1112 213674..214131 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1112.967.1

>prot_D-dichotoma_M_contig1112.967.1 ID=prot_D-dichotoma_M_contig1112.967.1|Name=mRNA_D-dichotoma_M_contig1112.967.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=190bp
MPSETLSRWRPPTRPRRRWSRTTCFHAHHAWLWSRTGSNAVLLAGEQGLP
PECADPLREIVLGLSLGAFRRALVGDPLARVDLMVVRRKPGPDSVRARPR
VYSQAKTAWLEEHFGQLETTGMVVRTSQATFSSVAMVVPNGSSCRIVADY
RAVNRLVVQSALPLPRLEEVGAMLGGAVALCTLDMIQGY*
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mRNA from alignment at D-dichotoma_M_contig1112:212927..214461+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1112.967.1 ID=mRNA_D-dichotoma_M_contig1112.967.1|Name=mRNA_D-dichotoma_M_contig1112.967.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=1535bp|location=Sequence derived from alignment at D-dichotoma_M_contig1112:212927..214461+ (Dictyota dichotoma ODC1387m male)
CGCTCCCGGACACGGGGTCAGGTGTCACCTTGATCTCGGAGACCCTGGCG CGACAGCTGCAACGCGAGGCACACTAGCCGGTCTCAGGGACGTTCCAGGG GCGGGCCCGCGTGCAAAATTCCTTCGGCGAGGTAAGGGCGGTGGAGCAAC AAACCGTCTCCCTGCACCTGACCTTGATGACCCTGTGGGGAAATGTGCGT TTCCAGCTTCCTTCCGTCATCCTGCCAGGCCCAGACAACCTGGTCATCCT GGGCCAAGCGACGCTGCGGGAGGTGCTCGGAGTGGACGTGATGCAGGCCC TGAAGCAGAGTATGCTCAAACTTCGGGAGGTGGCCGCGGATGGTGACGAA GACGGAGAGGGTGGAGCCGAGGTCGACGAGGATCCCGGTGGTGCCGCCGC GGTGAAAGCTGAGCATGAATATGGCACGTCAACCGGGGCCGGTGACGGTG GAGATGCCAGGACGGGCCCGGGTGGTGAAATCAGGATCAGTGACGGCAGA GGAGCCGGGGCCGAGGGGCACCGGGGCAAGAAGACGCTGGACGGCTCGGA AGCAGCACCGCCCGTGAGTCCGGTGCTATGTGGGCGTCAAACTTTCCAGC TGACGGTGGATGCCTTCAGAGACACTCTCGAGGTGGCGACCCCCGACCAG GCCAAGGAGGAGGTGGTCAAGGACAACCTGCTTCCACGCACACCACGCAT GGTTATGGAGCAGGACGGGGAGTTGCGCGCCCGAAAAGAGGCGTTGCGTA ACGCGGTACTGCTGGCTGGTGAACAGGGCCTCCCACCCGAGTGCGCAGAT CCGCTACGCGAGATAGTGCTGGGTCTCTCCCTTGGCGCTTTCCGCCGCGC GCTGGTCGGTGACCCACTCGCGCGCGTCGACCTGATGGTTGTCCGGCGAA AACCGGGGCCCGACTCTGTCCGGGCCAGGCCGCGCGTATATAGCCAGGCC AAGACGGCCTGGCTTGAGGAACATTTCGGACAACTAGAGACGACTGGGAT GGTGGTCCGAACCTCCCAGGCAACCTTCTCGAGCGTGGCCATGGTGGTGC CAAATGGGAGCAGTTGCCGGATAGTCGCCGACTACCGTGCTGTAAACCGT CTGGTGGTCCAGTCTGCTCTGCCCTTACCGCGACTGGAGGAAGTGGGGGC CATGCTGGGCGGGGCTGTGGCACTCTGCACCCTGGACATGATCCAGGGGT ACTGACAGACCCCCCTCCACCCGGATGCACGGGAGCTTTTTACGATGGTC TCGGCTGGCGGGCTGTACACCCCGACGCGGGTGCCACAAGGGGTCCTTAA CGCGACCGCCTACTTCCAGGCGGTGATGACCGACAAGCTGCAGGGGATGA TCGGACGACGGTGCCTGGTGTGGGTTGACGACGTCATCATCTGAGCGAGG GATGCAGGGACCCTGCTTGATCGGATCGAGATGGTGCTGGAGTGGCTCCT TCTAAGGGGACTTTTAGCCGCGGCACTTAAGGCCGTTTTCTTCCGCCGTG AGATCAGGTGGTGCGGACGTATCTATTCCGGAGAG
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1112:212927..214461+

>mRNA_D-dichotoma_M_contig1112.967.1 ID=mRNA_D-dichotoma_M_contig1112.967.1|Name=mRNA_D-dichotoma_M_contig1112.967.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1140bp|location=Sequence derived from alignment at D-dichotoma_M_contig1112:212927..214461+ (Dictyota dichotoma ODC1387m male)
ATGCCTTCAGAGACACTCTCGAGGTGGCGACCCCCGACCAGGCCAAGGAG
GAGGTGGTCAAGGACAACCTGCTTCCACGCACACCACGCATGGTTATGGA
GCAGGACGGGGAATGCCTTCAGAGACACTCTCGAGGTGGCGACCCCCGAC
CAGGCCAAGGAGGAGGTGGTCAAGGACAACCTGCTTCCACGCACACCACG
CATGGTTATGGAGCAGGACGGGGAGTAACGCGGTACTGCTGGCTGGTGAA
CAGGGCCTCCCACCCGAGTGCGCAGATCCGCTACGCGAGATAGTGCTGGG
TCTCTCCCTTGGCGCTTTCCGCCGCGCGCTGGTCGGTGACCCACTCGCGC
GCGTCGACCTGATGGTTGTCCGGCGAAAACCGGGGCCCGACTCTGTCCGG
GCCAGGCCGCGCGTATATAGCCAGGCCAAGACGGCCTGGCTTGAGGAACA
TTTCGGACAACTAGAGACGACTGGGATGGTGGTCCGAACCTCCCAGGCAA
CCTTCTCGAGCGTGGCCATGGTGGTGCCAAATGGGAGCAGTTGCCGGATA
GTCGCCGACTACCGTGCTGTAAACCGTCTGGTGGTCCAGTCTGCTCTGCC
CTTACCGCGACTGGAGGAAGTGGGGGCCATGCTGGGCGGGGCTGTGGCAC
TCTGCACCCTGGACATGATCCAGGGGTACTGAGTAACGCGGTACTGCTGG
CTGGTGAACAGGGCCTCCCACCCGAGTGCGCAGATCCGCTACGCGAGATA
GTGCTGGGTCTCTCCCTTGGCGCTTTCCGCCGCGCGCTGGTCGGTGACCC
ACTCGCGCGCGTCGACCTGATGGTTGTCCGGCGAAAACCGGGGCCCGACT
CTGTCCGGGCCAGGCCGCGCGTATATAGCCAGGCCAAGACGGCCTGGCTT
GAGGAACATTTCGGACAACTAGAGACGACTGGGATGGTGGTCCGAACCTC
CCAGGCAACCTTCTCGAGCGTGGCCATGGTGGTGCCAAATGGGAGCAGTT
GCCGGATAGTCGCCGACTACCGTGCTGTAAACCGTCTGGTGGTCCAGTCT
GCTCTGCCCTTACCGCGACTGGAGGAAGTGGGGGCCATGCTGGGCGGGGC
TGTGGCACTCTGCACCCTGGACATGATCCAGGGGTACTGA
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