prot_D-dichotoma_M_contig926.19992.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig926.19992.1
Unique Nameprot_D-dichotoma_M_contig926.19992.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length124
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.380e-68
Identity = 111/122 (90.98%), Postives = 118/122 (96.72%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVIK 122
            MSGKGKGGRG KKS +RS+KAGLQFPVGR+GRFLK GKY+SR+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK +K
Sbjct:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 5.720e-68
Identity = 111/123 (90.24%), Postives = 119/123 (96.75%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVIKS 123
            MSGKGKGGRG KKS +RS+KAGLQFPVGR+GRFLK GKY+SR+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK +K+
Sbjct:   46 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKN 167
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 4.090e-66
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            MSGKGKGGRG KKS S+SSKAGLQFPV RIGR+LK GKY++R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.090e-65
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            MSGKGKGGRG KKS S+SSKAGLQFPV RIGR+LK GKY++R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.030e-65
Identity = 107/119 (89.92%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            MSGKGKGGRG KK  SRS+KAGLQFPVGRIGRF+K GKYSSR+G GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG-KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.880e-63
Identity = 99/117 (84.62%), Postives = 113/117 (96.58%), Query Frame = 0 
Query:    3 GKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            GKGKGGRGDKK+ S+S+KAGLQFPVGR+GRFLK G+Y+ R+GAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.000e-63
Identity = 101/119 (84.87%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            MSGKGKGGRG+KKS + S+KAGLQFPVGRIGR+L+ GKY++R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.260e-63
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVIK 122
            MSGKGKGGRG KKS + S+KAGLQFPVGRIGR+L+ GKY++R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 196 bits (499), Expect = 7.590e-63
Identity = 104/121 (85.95%), Postives = 112/121 (92.56%), Query Frame = 0 
Query:    1 MSGKGKGGRGD--KKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 119
            M+GKGKGGRG   KKS S+SSKAGLQFPV R+GRFLK G+Y+ R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Match: B7FZS7_PHATC (Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=B7FZS7_PHATC)

HSP 1 Score: 195 bits (495), Expect = 4.140e-62
Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:    3 GKGKGGRGDKK-SQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVIKS 123
            GKGKGGRGDKK + S SSKAGLQFPVGRIGR+L+ GKY++R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKK IK+
Sbjct:   10 GKGKGGRGDKKQTTSSSSKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGNVTIAAGGVLPNIHAILLPKKTIKT 131
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig926.19992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.380e-6890.98Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI5.720e-6890.24Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE4.090e-6691.60Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI2.090e-6591.60Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI4.030e-6589.92Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A835ZLE9_9STRA1.880e-6384.62Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA3.000e-6384.87Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6U2JFS4_9STRA4.260e-6384.43Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A836CG77_9STRA7.590e-6385.95Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
B7FZS7_PHATC4.140e-6283.61Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 13..35
score: 71.43
coord: 57..70
score: 90.54
coord: 99..117
score: 76.04
coord: 42..57
score: 87.5
coord: 71..85
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 2..122
e-value: 3.0E-78
score: 276.0
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 91..120
e-value: 1.9E-18
score: 65.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..122
e-value: 2.3E-61
score: 207.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..122
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 8..88
e-value: 3.3E-17
score: 63.1
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 2..121
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 2..121
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 21..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig926contigD-dichotoma_M_contig926:141745..142116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig926.19992.1mRNA_D-dichotoma_M_contig926.19992.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig926 141696..142116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig926.19992.1 ID=prot_D-dichotoma_M_contig926.19992.1|Name=mRNA_D-dichotoma_M_contig926.19992.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=124bp
MSGKGKGGRGDKKSQSRSSKAGLQFPVGRIGRFLKAGKYSSRIGAGAPVY
LAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEV
TIASGGVLPNIHAVLLPKKVIKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS