prot_D-dichotoma_M_contig92.19930.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig92.19930.1
Unique Nameprot_D-dichotoma_M_contig92.19930.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length144
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig92.19930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 63..79
e-value: 0.092
score: 17.6
coord: 127..143
e-value: 0.012
score: 23.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 128..142
e-value: 4.3E-4
score: 20.2
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 128..143
score: 10.131
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 64..79
score: 9.257
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 111..143
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 48..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig92contigD-dichotoma_M_contig92:197468..197899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig92.19930.1mRNA_D-dichotoma_M_contig92.19930.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig92 197447..197899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig92.19930.1 ID=prot_D-dichotoma_M_contig92.19930.1|Name=mRNA_D-dichotoma_M_contig92.19930.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=144bp
MGKLSGKYEMVEEERWRLKKERGDRKQTSAKSSGPHDQGAGLKTGTGRGT
PNVDERATPRVQECRRCGGRGHHWRECPSDPAVAEVNQARMGTQPEPLSG
QEMNDGSGSRQAPESSSQGERRPFHGDCFFCGEAGHVQRRCPRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf