prot_D-dichotoma_M_contig92.19927.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig92.19927.1
Unique Nameprot_D-dichotoma_M_contig92.19927.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length110
Homology
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BLAST of mRNA_D-dichotoma_M_contig92.19927.1 vs. uniprot
Match: A0A6H5L4P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P7_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 3.530e-24
Identity = 67/109 (61.47%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:    2 DEALVLAAEAANERLCPLASNSVLAVVKTVLACVKREMLDTSWGRRLVSVAPSSPPDAAVVGALAILAAIREDPVGADLALALLSMAVSSYRRDTVSVPFPNQLESAGG 110
            D+ LV A EAAN RL PL+ NSV A V TVL CVKRE    S        A       A + A A+LAAI+EDP+GADL LALLSMAVSSYRRDTVS PFP QLES GG
Sbjct:  101 DDVLVPATEAANGRLRPLSCNSVRAAVTTVLQCVKREAGSASVLSSGDKGAEGGGAARARLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGG 209
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BLAST of mRNA_D-dichotoma_M_contig92.19927.1 vs. uniprot
Match: D8LRG8_ECTSI (Poly (ADP-ribose) polymerase family, member 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG8_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 4.800e-24
Identity = 69/110 (62.73%), Postives = 75/110 (68.18%), Query Frame = 0 
Query:    2 DEALVLAAEAANERLCPLASNSVLAVVKTVLACVKREMLDTSWGRRLVSVAPSSPPDA-AVVGALAILAAIREDPVGADLALALLSMAVSSYRRDTVSVPFPNQLESAGG 110
            D+ LV A EAAN RL PL+ NSV AVV TVL CVKRE    S        A      A A + A A+LAAI+EDP+GADL LALLSMAVSSYRRDTVS PFP QLES GG
Sbjct:  101 DDVLVPATEAANGRLRPLSCNSVRAVVTTVLQCVKREAASASVLSSGDKGAEGGGGAARARLAAEAVLAAIKEDPLGADLVLALLSMAVSSYRRDTVSTPFPKQLESPGG 210
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig92.19927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4P7_9PHAE3.530e-2461.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRG8_ECTSI4.800e-2462.73Poly (ADP-ribose) polymerase family, member 8 n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041400PARP16 N-terminal domainPFAMPF18084ARTD15_Ncoord: 70..107
e-value: 4.6E-10
score: 39.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig92contigD-dichotoma_M_contig92:119030..123993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig92.19927.1mRNA_D-dichotoma_M_contig92.19927.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig92 119030..123993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig92.19927.1 ID=prot_D-dichotoma_M_contig92.19927.1|Name=mRNA_D-dichotoma_M_contig92.19927.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=110bp
GDEALVLAAEAANERLCPLASNSVLAVVKTVLACVKREMLDTSWGRRLVS
VAPSSPPDAAVVGALAILAAIREDPVGADLALALLSMAVSSYRRDTVSVP
FPNQLESAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041400PARP16_N