prot_D-dichotoma_M_contig9.19748.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig9.19748.1
Unique Nameprot_D-dichotoma_M_contig9.19748.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length457
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig9.19748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 207..238
e-value: 6.3
score: 15.8
coord: 394..425
e-value: 1200.0
score: 3.4
coord: 170..202
e-value: 0.64
score: 19.1
coord: 134..165
e-value: 2900.0
score: 0.3
coord: 358..389
e-value: 0.63
score: 19.1
coord: 243..275
e-value: 240.0
score: 8.7
coord: 281..313
e-value: 1300.0
score: 3.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 158..274
e-value: 2.7E-12
score: 46.2
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 181..336
e-value: 6.8E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 234..382
coord: 153..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig9contigD-dichotoma_M_contig9:932961..934331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig9.19748.1mRNA_D-dichotoma_M_contig9.19748.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig9 932942..935287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig9.19748.1 ID=prot_D-dichotoma_M_contig9.19748.1|Name=mRNA_D-dichotoma_M_contig9.19748.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=457bp
MFLRGNSIHVAARCVDGIVSLRAGHACHLRRFCTGSWASSEGNGFRETPT
ADDTRSGTSKRNRRKRIDAPLKPPVQRFQPFGRPGGEGRAVAGAVIGGLG
GHGSHGRRDSTSPNSGDNVRWLQENVVLNQYTAEGMLEREKRIGCLSMDE
LNQRLRWFRDRVGLSEDTTRKILVKRPSLLCKGVEDTLEPLAQWLLDEFD
LEDEGLPTMLTSVPNILQCSIEGMTTKINWLAQRVGFSHAEAVQVVKACP
FVLTNGIDSALAPRLQWIVENLALSEGDELRTWILANPRMVGHGIWSTLA
PTMQFLEETVGLDREKARKFLVRNSLYFNSTSWLHHDYAAKQIWFRTNLG
IHSGEEISKLLRREPRLLNRTSSRLSSLLEFLVEELGATKEEVNAAVMRD
PWLLLTGIQTFWVPRVAALRNAGAEVSFKTQRMTLLTSRKDFDAHVEALS
ATTAFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf