prot_D-dichotoma_M_contig1080.699.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1080.699.1
Unique Nameprot_D-dichotoma_M_contig1080.699.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length127
Homology
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BLAST of mRNA_D-dichotoma_M_contig1080.699.1 vs. uniprot
Match: A0A7C1DFN9_9DELT (Crp/Fnr family transcriptional regulator n=1 Tax=Desulfonatronum sp. TaxID=1963255 RepID=A0A7C1DFN9_9DELT)

HSP 1 Score: 50.8 bits (120), Expect = 5.770e-5
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0 
Query:   42 EIVIKTLSGVPAFGPLHRDALEAIADTTSERHVDAGEIVAAQDDPAKEFFIIVSGEVRVFRRAGNCDGQE------GVDQ---EVNVLHGGS 124
            E +I  L  VP F  L RD L+A+ D    +    G+ +  + DPA+ FF+I+SG+V+V++ +   DG+E      G D+   EV V  GGS
Sbjct:    3 EQIIPHLDRVPVFHGLPRDQLQALVDIAEPKIHQQGDNIFMEGDPAEGFFLILSGQVKVYKLS--LDGKEQVLHFVGPDEIFAEVPVFSGGS 92
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BLAST of mRNA_D-dichotoma_M_contig1080.699.1 vs. uniprot
Match: A0A7V9SW28_9ACTN (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9SW28_9ACTN)

HSP 1 Score: 49.3 bits (116), Expect = 8.740e-5
Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 0 
Query:   45 IKTLSGVPAFGPLHRDALEAIADTTSERHVDAGEIVAAQDDPAKEFFIIVSGEVRVFRRAGNCDGQEGVDQEVNVLHGGSSFG 127
            +++L   P F  L +D L  +A  T +  V+ G+++  + +PAKEFF+I+ GEV V R            + V  L  G  FG
Sbjct:    9 VESLRRSPLFETLSKDELVHLAKVTEDLEVEEGKVLCREGEPAKEFFVIIDGEVEVTRSG----------RHVRTLKDGEFFG 81
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1080.699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7C1DFN9_9DELT5.770e-536.96Crp/Fnr family transcriptional regulator n=1 Tax=D... [more]
A0A7V9SW28_9ACTN8.740e-532.53Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availablePANTHERPTHR11635CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAINcoord: 39..127
IPR000595Cyclic nucleotide-binding domainPFAMPF00027cNMP_bindingcoord: 72..127
e-value: 1.7E-8
score: 34.4
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 53..127
score: 15.627
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 17..127
e-value: 1.7E-16
score: 62.2
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 39..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1080contigD-dichotoma_M_contig1080:52974..56350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1080.699.1mRNA_D-dichotoma_M_contig1080.699.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1080 52960..56350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1080.699.1 ID=prot_D-dichotoma_M_contig1080.699.1|Name=mRNA_D-dichotoma_M_contig1080.699.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=127bp
MPCGIQRQLAVVRLQCRKPRHIKEAEGEVVRAFKRKVREQKEIVIKTLSG
VPAFGPLHRDALEAIADTTSERHVDAGEIVAAQDDPAKEFFIIVSGEVRV
FRRAGNCDGQEGVDQEVNVLHGGSSFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like