prot_D-herbacea_F_contig10.159.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.159.1
Unique Nameprot_D-herbacea_F_contig10.159.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length257
Homology
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: D7FP83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP83_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 5.090e-111
Identity = 171/196 (87.24%), Postives = 183/196 (93.37%), Query Frame = 0
Query:    4 EAFADGGIGDEAGAAGEANFFESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKVVGEDDFFADLGISYKDFDMPDEVDDFYEAKEDPDIAKDTGKMRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQ 199
            EAFA+ G+GD+   AGE  FFESVKTSLPGLDMFDPSVFDIRMVMGVL  V+L+AY IF+LFVRKVVGEDDFFADLGISYKDFDMPDEVDD+YEAKE+PDIA D GK+RNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGE+EWHAFQEAE MIS+EIESVQ EADE+EPGWSQSIWPLAMQLRTVLVQRREQ
Sbjct:    4 EAFAEAGMGDDT--AGEGTFFESVKTSLPGLDMFDPSVFDIRMVMGVLACVSLLAYAIFRLFVRKVVGEDDFFADLGISYKDFDMPDEVDDYYEAKENPDIASDAGKLRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEKEWHAFQEAETMISEEIESVQNEADEIEPGWSQSIWPLAMQLRTVLVQRREQ 197          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A835Z738_9STRA (Pre protein translocase subunit Sec66-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z738_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.630e-65
Identity = 106/176 (60.23%), Postives = 139/176 (78.98%), Query Frame = 0
Query:   24 FESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKVVGEDDFFADLGISYKDFDMPDEVDDFYEAKEDPDIAKDTGKMRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQ 199
            FE +KTSLP LD+FDPSVFD+RMV+G L +  L++Y  ++L++ KVV  DDF ADLGISY DF++PDE++++YEAKE      D   +RN LLKRAIADIPII+R+Q EGPG+ N+YQQAMIG+REW A+Q AE +I +EIE VQ EA+E+EPGW Q IW +A +LR  L+QR++Q
Sbjct:   31 FEDIKTSLPRLDIFDPSVFDMRMVLGALTLFGLLSYFAYRLYMNKVVAGDDFIADLGISYADFELPDEIEEYYEAKEA--AGDDATALRNPLLKRAIADIPIIMRLQKEGPGMQNLYQQAMIGDREWQAYQAAEALIGEEIEQVQAEAEEIEPGWGQQIWRMASELRQALLQRQQQ 204          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A1Z5KHC6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHC6_FISSO)

HSP 1 Score: 119 bits (297), Expect = 1.960e-28
Identity = 78/212 (36.79%), Postives = 115/212 (54.25%), Query Frame = 0
Query:   14 EAGAAGEANFFESVKTSL-PGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKVVGEDDFFADLGISYKDFDMPDEVDDFYEAK--------------EDPDIAKDTGKMR---NALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQTEAMAEKA 207
            +AG  GE+ F ++ +  + P  D  DP+ + +     V+VI  L          +    EDDFFA+L     +  +P EVD++YE K              +DP   + T   R    AL+KRAIADIP++  +Q E  G+  +Y Q+M   ++W ++Q+AE ++S E+E V+ EADE+EPGWSQSIW  AMQ   +L QR E  E   E+A
Sbjct:   24 DAGGEGESFFQDTAQEGISPDADGIDPAFYLLGAAFAVIVIYFLXXRA------KXXXSEDDFFAELDGDKFNLKLPSEVDEYYETKAKCEAAGWEPGQPIKDPKDQQATQPQRLLAQALMKRAIADIPMVQHIQKESSGMNKLYSQSMCSVKQWRSYQQAESLVSQEVEEVRAEADEIEPGWSQSIWRQAMQYHQMLKQRHELEEKQREEA 229          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A7S3L5D8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5D8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.140e-24
Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 0
Query:   52 VIVALVAYGIFKLFVRKVVGE-DDFFADLGISYKDFDMPDEVDDFYEAKE-------DPDIAKDTGK---------MRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQ 199
            V++ ++AY +     +K   + DDFFA L     +  +P EVD++Y+ KE       +P     T +         M  AL+KRAIADIPI+  +Q E PG+  +Y Q+M  E++W A+Q+AE ++S E++ V+ E+D++EPGWSQ IW  AMQ   +L QR EQ
Sbjct:   66 VVLFVIAYFVINSMRKKDENDGDDFFASLDTEKFNLKLPSEVDEYYKIKEKCESAGWEPGSKPATPQEAANGPHRVMAQALMKRAIADIPILQHIQKESPGMNKLYSQSMCSEKQWRAYQKAEALVSAEVDEVRRESDQIEPGWSQMIWRQAMQYHQMLKQRHEQ 230          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A7S2S0P4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P4_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.930e-23
Identity = 84/226 (37.17%), Postives = 121/226 (53.54%), Query Frame = 0
Query:    7 ADGGIGDEAGAAGEANFFESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKVVGEDD---FFADLGISYKDFDMPDEVDDFYEAKED-PDIAKDTGK---------------MRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRRE----QTEAMAEKAAD 209
            AD G G  AG  G A  FE +     G D   P+++   +V+GVL +V L+ Y ++    R+   +DD   FF+DL     + ++P  VD++YE K+   D   + GK               +  AL+KR IADIP++  +Q E  G+  +Y Q+M   ++W  +Q AE M+S E+E V+ EADE+EPGWSQ IW  AMQ   +L  R E    Q  AMA K A+
Sbjct:   22 ADSGDGTFAGEEGAA--FEEMPMGPKGTD---PAIY---LVLGVLAMV-LIWYFLYS---RRSKKDDDDFAFFSDLDGEKFNLNLPAAVDEYYEVKDKCEDNGWEPGKPPTNQQEAASGPHRVLAQALMKRCIADIPLVTHIQKESAGMNKLYSQSMCSVKQWKTYQAAEAMVSAEVEEVRAEADEIEPGWSQVIWRQAMQYHNMLKNRHEIEAKQLAAMASKKAE 235          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A448YU82_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU82_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.020e-22
Identity = 82/220 (37.27%), Postives = 118/220 (53.64%), Query Frame = 0
Query:   10 GIGDEAGAAGEANFFESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKV-VGEDDFFADLGISYKDFD--MPDEVDDFYEAKED-----------PDIAKDTGK---MRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQTE-AMAEKAADAK 211
            G G E   AGE    E V   + G+D   P+++        L++  +V   ++ L+++K    EDD+F+    SY+ F+  +P EVD++Y  KE            P      G    M  AL+KRAI DIPI+  +Q E  G+  +Y Q+M    +W A+Q AE M+S E++ V+ EADE+EPGWSQ IW  AMQ   +L Q+ EQ + A AE AA  K
Sbjct:   18 GEGAEGDTAGEGFEEEIVMDEVTGVD---PAIY--------LLVAFVVGAILYLLYLKKSRSNEDDYFS----SYEKFNIKLPAEVDEYYSVKEKCMKAGWEPGKPPTDKNPNGPHRVMAQALMKRAIGDIPIVTFIQKESAGMNKLYSQSMCSVSQWRAYQNAETMVSTEVDEVRAEADEIEPGWSQVIWRQAMQYHGMLKQKHEQEQRAAAETAAKKK 222          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A7S1E5I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5I0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.170e-22
Identity = 68/192 (35.42%), Postives = 106/192 (55.21%), Query Frame = 0
Query:   25 ESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKVVGEDDFFADLGISYKDFDMPDEVDDFYEAKE-------DPDIAKDTGK----------MRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQ 199
            E VK ++ GLD   P  +   +++G ++++ LV      LF  K    +DFF +L     +  +P  V+++Y+ K+       +P  A   G+          M  AL+KR IADIPI+  +Q E PG+  +Y Q+M   ++W  +Q AE ++S E++ V+ EADE+EPGWSQ IW  AMQ   +L Q+ EQ
Sbjct:    1 EMVKEAMGGLD---PVYY---LIIGTIIVMLLV-----YLFRPKKSEVEDFFDELDGDKFNLKLPAAVEEYYQVKDKCLDAGWEPGTAPTPGQQQAANGPHRVMAQALMKRCIADIPIVTHIQKESPGMNKLYSQSMCSVKQWRTYQAAEALVSGEVDEVRAEADEIEPGWSQVIWKQAMQYHNMLKQKHEQ 181          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A7S4AC03_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC03_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.620e-22
Identity = 79/225 (35.11%), Postives = 118/225 (52.44%), Query Frame = 0
Query:   10 GIGDEAGAAGEANFFESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFV---RKVVGEDDFFADLGISYKDFD--MPDEVDDFYEAKED--------------PDIAKDTGK---MRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQTEAMAEKAADAKL 212
            G  D+AG A  A   E     +P ++     V D  +   + ++VA V  G F  F+   R+   E+D+F+    SY+ F+  +P EVD++Y  K+               P+ A   G    M  AL+KRAI DIPI+  +Q E  G+  +Y Q+M    +W A+Q AE M+S E++ V+ EADE+EPGWSQ +W  AMQ  T+L Q+ E  +  A + A  K+
Sbjct:   16 GAADDAGGAEGATAGEGFDEEVPLME----DVVDAGVDPAIYLLVAFVV-GAFLYFLYLRRQRSNEEDYFS----SYEKFNIKLPAEVDEYYSVKDKCMKAGWSPGKPAAGPEKANPNGPHRVMAQALMKRAIGDIPIVTFIQKEAAGMNKLYSQSMCSVSQWRAYQTAESMVSTEVDEVRAEADEIEPGWSQVVWRQAMQYHTMLKQKHELEQKQAAETAAKKM 231          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: K0T2G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T2G4_THAOC)

HSP 1 Score: 103 bits (256), Expect = 3.030e-22
Identity = 73/212 (34.43%), Postives = 114/212 (53.77%), Query Frame = 0
Query:   16 GAAGE--------ANFFESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYGIFKLFVRKV-VGEDDFFADLGISYKDFDMPDEVDDFYEAKE-------DPDIAKDTGKMRN-------ALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQTEAMA 204
            GAAGE         +F E+ +    G+D   P+ +   ++  V+++  L  Y + K   RK     DDFF++L     +  +P  VD++YE K        +P      G+  N       AL+KR IADIPI+  +Q E  G+  +Y Q+M   ++W ++Q AE M+S E+E V+ EADE+EPGWSQ++W  AMQ   ++ Q+ EQ ++ A
Sbjct:   19 GAAGEDVPPNMGGEDFEEAAEEIAKGID---PAFY---LIFAVIIVGGLFLYNLLKK--RKDNANMDDFFSNLDGDKFNIKLPSAVDEYYEVKAKCESDGWEPGQPMANGQPTNHHRLLAQALMKRCIADIPIVTHIQKESQGMNKLYSQSMCSVKQWKSYQAAEAMVSAEVEEVRAEADEIEPGWSQAVWRQAMQYHNMIKQKEEQAKSQA 222          
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Match: A0A1E7F2C2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2C2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.200e-22
Identity = 77/211 (36.49%), Postives = 114/211 (54.03%), Query Frame = 0
Query:    6 FADGGIGDEAGAAGEANFFESVKTSLPGLDMFDPSVFDIRMVMGVLVIVALVAYG-IFKLFVRKVVGEDD-FFADLG-ISYKDFDMPDEVDDFYEAKED------------PDIAKDTGK---MRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREWHAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRRE 198
            F D G G E G AGE  F  + +     +   DP+++         +++A+V  G ++ L+ R    EDD +F++ G  + K   +P EVD++Y  KE              D +  TG    M  AL+KRAI DIPI+  +Q E PG+  +Y Q+M    +W A+Q AE ++S E++ V+ EADE+EPGWSQ IW  AMQ   +L Q+ E
Sbjct:   16 FEDDGAGAE-GTAGEDGFDGAEEMMEEAVQGIDPAIY---------LLIAIVVGGFLYFLYKRSSRSEDDEYFSNYGKFNIK---LPAEVDEYYAVKEKCINAGWEAGNPPKDKSSVTGPHRVMAQALMKRAIGDIPIVTFIQKESPGMNKLYAQSMCSVSQWRAYQTAEAVVSTEVDEVRSEADEIEPGWSQVIWRQAMQYHNMLKQKHE 213          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP83_ECTSI5.090e-11187.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z738_9STRA1.630e-6560.23Pre protein translocase subunit Sec66-domain-conta... [more]
A0A1Z5KHC6_FISSO1.960e-2836.79Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3L5D8_9STRA1.140e-2439.39Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2S0P4_9STRA6.930e-2337.17Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448YU82_9STRA1.020e-2237.27Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1E5I0_9STRA1.170e-2235.42Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S4AC03_9STRA1.620e-2235.11Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
K0T2G4_THAOC3.030e-2234.43Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1E7F2C2_9STRA3.200e-2236.49Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018624Translocation protein Sec66PFAMPF09802Sec66coord: 111..208
e-value: 1.3E-15
score: 57.4
IPR018624Translocation protein Sec66PANTHERPTHR28229FAMILY NOT NAMEDcoord: 110..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:858216..867432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.159.1mRNA_D-herbacea_F_contig10.159.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 856978..867454 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.159.1 ID=prot_D-herbacea_F_contig10.159.1|Name=mRNA_D-herbacea_F_contig10.159.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=257bp
MGGEAFADGGIGDEAGAAGEANFFESVKTSLPGLDMFDPSVFDIRMVMGV
LVIVALVAYGIFKLFVRKVVGEDDFFADLGISYKDFDMPDEVDDFYEAKE
DPDIAKDTGKMRNALLKRAIADIPIILRMQNEGPGIYNMYQQAMIGEREW
HAFQEAEKMISDEIESVQGEADEVEPGWSQSIWPLAMQLRTVLVQRREQT
EAMAEKAADAKLAQKQGKETVVKTAAKKKPATATVTKAAKKEDKSNSEDV
SVGDID*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018624Sec66