prot_D-herbacea_F_contig1.126.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.126.1
Unique Nameprot_D-herbacea_F_contig1.126.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length115
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A6H5K2A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A1_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 2.390e-69
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTI+GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+GVKQKIQDKEG P
Sbjct:   78 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIP 190
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BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A2R5GBF3_9STRA (Polyubiquitin n=9 Tax=Eukaryota TaxID=2759 RepID=A0A2R5GBF3_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.540e-69
Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTIE VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE VKQKIQDKEG P
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIP 113
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: F0YA14_AURAN (Ubiquitin n=2 Tax=Sar TaxID=2698737 RepID=F0YA14_AURAN)

HSP 1 Score: 210 bits (534), Expect = 5.340e-68
Identity = 107/113 (94.69%), Postives = 110/113 (97.35%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTI+ VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+I+ VKQKIQDKEG P
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIP 113
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A7S1UDB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDB6_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.020e-67
Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTI+ VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ VKQKIQDKEG P
Sbjct:   61 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIP 173
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A1D3D128_9EIME (Uncharacterized protein n=2 Tax=Alveolata TaxID=33630 RepID=A0A1D3D128_9EIME)

HSP 1 Score: 209 bits (532), Expect = 1.080e-67
Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE VK KIQDKEG P
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 113
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A151L3A4_9APIC (Polyubiquitin n=3 Tax=Alveolata TaxID=33630 RepID=A0A151L3A4_9APIC)

HSP 1 Score: 209 bits (532), Expect = 1.080e-67
Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE VK KIQDKEG P
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 113
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: D8LC68_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LC68_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 2.040e-67
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTI+GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+GVKQKIQDKEG P
Sbjct:  228 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIP 340
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A485KBK1_9STRA (Aste57867_3872 protein n=9 Tax=Oomycota TaxID=4762 RepID=A0A485KBK1_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.170e-67
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSD+I+ VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+I+ VKQKIQDKEG P
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIP 113
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A7R9U6E0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E0_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.210e-67
Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITLDVEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE VK KIQDKEG P
Sbjct:   47 MQIFVKTLTGKTITLDVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKTKIQDKEGIP 159
[Close]
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A3Q0RUX1_AMPCI (Uncharacterized protein n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RUX1_AMPCI)

HSP 1 Score: 206 bits (524), Expect = 6.910e-67
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHP 113
            MQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEG P
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 113
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2A1_9PHAE2.390e-6997.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GBF3_9STRA6.540e-6997.35Polyubiquitin n=9 Tax=Eukaryota TaxID=2759 RepID=A... [more]
F0YA14_AURAN5.340e-6894.69Ubiquitin n=2 Tax=Sar TaxID=2698737 RepID=F0YA14_A... [more]
A0A7S1UDB6_9STRA1.020e-6795.58Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1D3D128_9EIME1.080e-6795.58Uncharacterized protein n=2 Tax=Alveolata TaxID=33... [more]
A0A151L3A4_9APIC1.080e-6795.58Polyubiquitin n=3 Tax=Alveolata TaxID=33630 RepID=... [more]
D8LC68_ECTSI2.040e-6797.35Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
A0A485KBK1_9STRA2.170e-6793.81Aste57867_3872 protein n=9 Tax=Oomycota TaxID=4762... [more]
A0A7R9U6E0_9STRA2.210e-6795.58Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A3Q0RUX1_AMPCI6.910e-6793.81Uncharacterized protein n=1 Tax=Amphilophus citrin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 11..31
score: 74.21
coord: 53..74
score: 92.03
coord: 32..52
score: 95.05
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 77..114
e-value: 17.0
score: 2.3
coord: 1..72
e-value: 9.4E-36
score: 134.8
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 3..74
e-value: 3.9E-34
score: 116.2
coord: 79..114
e-value: 1.4E-10
score: 40.8
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 30.801
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 77..114
score: 12.052
NoneNo IPR availableGENE3D3.10.20.90coord: 77..114
e-value: 3.6E-19
score: 70.6
NoneNo IPR availableGENE3D3.10.20.90coord: 1..76
e-value: 1.1E-45
score: 155.7
NoneNo IPR availablePANTHERPTHR10666:SF327coord: 1..113
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..113
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 76..114
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:3281621..3288459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.126.1mRNA_D-herbacea_F_contig1.126.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 3280641..3288509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.126.1 ID=prot_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=115bp
MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE
GVKQKIQDKEGHPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR019954Ubiquitin_CS
IPR000626Ubiquitin_dom
IPR019956Ubiquitin