mRNA_D-herbacea_F_contig1.126.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1.126.1
Unique NamemRNA_D-herbacea_F_contig1.126.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A2V2UIF5_TRYCR (Putative polyubiquitin n=2 Tax=Trypanosoma cruzi TaxID=5693 RepID=A0A2V2UIF5_TRYCR)

HSP 1 Score: 240 bits (613), Expect = 1.920e-73
Identity = 125/150 (83.33%), Postives = 130/150 (86.67%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPS 500
            MQIFVKTLTGKTI L+VE SDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTIE VK KIQDKEGH A PAA  L  QAAGG  H+  LQHPEGV  APCAAP+
Sbjct:   77 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGHSAGPAAPDLCWQAAGGRPHARRLQHPEGVHAAPCAAPA 226          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: UPI0004F077E6 (polyubiquitin isoform X4 n=5 Tax=Neognathae TaxID=8825 RepID=UPI0004F077E6)

HSP 1 Score: 231 bits (588), Expect = 4.360e-71
Identity = 121/152 (79.61%), Postives = 124/152 (81.58%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW 506
            MQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTIE VK KIQDKE               AG W+H V LQHPEGV    CAAP  W
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---------------AGRWTHPVRLQHPEGVHSPSCAAPERW 137          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A835ZEZ7_9STRA (Ubiquitin-related domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A835ZEZ7_9STRA)

HSP 1 Score: 236 bits (601), Expect = 7.580e-70
Identity = 122/152 (80.26%), Postives = 129/152 (84.87%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW 506
            MQIFVKTLTGKTITLDVEPSDTI+ VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+  + +   + GHP  PAA   R QAAGG  H   LQHPEGV  +  AAP+WW
Sbjct:  153 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWW 304          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A7J7KFQ4_BUGNE (Uncharacterized protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KFQ4_BUGNE)

HSP 1 Score: 224 bits (570), Expect = 3.810e-68
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCA 491
            MQIFVKTLTGKTITL+VE SDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIE VK KIQDK  +P   A ++L R+AA  W +S  LQHPEG+  A CA
Sbjct:   26 MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKR-NPTRSAKTYLCRKAARRWQNSFRLQHPEGIHPASCA 171          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A493TDE2_ANAPP (Uncharacterized protein n=1 Tax=Anas platyrhynchos platyrhynchos TaxID=8840 RepID=A0A493TDE2_ANAPP)

HSP 1 Score: 222 bits (565), Expect = 7.200e-67
Identity = 117/133 (87.97%), Postives = 119/133 (89.47%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSV 449
            MQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEG P       LR QAAGGWSH V
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQVD-LRWQAAGGWSHPV 208          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A7G2C2F1_9TRYP (Ubiquitin-2 like Rad60 SUMO-like/Ubiquitin family/Ubiquitin-like domain containing protein, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=A0A7G2C2F1_9TRYP)

HSP 1 Score: 219 bits (559), Expect = 3.150e-66
Identity = 115/151 (76.16%), Postives = 122/151 (80.79%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSW 503
            MQIFVKTLTGKTI L+VE SDTIE VK KIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTIE VK KIQDKEG P          +      H+ GLQHPEGVD AP A P+W
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRHARGLQHPEGVDAAPRAPPAW 151          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A446XU08_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446XU08_TRITD)

HSP 1 Score: 226 bits (575), Expect = 6.760e-66
Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSH 443
            MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGHP  PAASHLR QAA GW H
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGHPPGPAASHLRWQAARGWPH 131          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A5J4ZMR4_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZMR4_9ASTE)

HSP 1 Score: 222 bits (565), Expect = 1.420e-65
Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGV 473
            MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEG P    AS L R+A GG +HS GLQH E V
Sbjct:  129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQASDLCRKATGGRAHSCGLQHTERV 269          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A3B6PIP8_WHEAT (Uncharacterized protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6PIP8_WHEAT)

HSP 1 Score: 219 bits (558), Expect = 5.730e-65
Identity = 120/175 (68.57%), Postives = 131/175 (74.86%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW*PLEC---CFVCWLARTSSLPVL 566
            MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V         + K   + GH   PAAS LRRQAA G  H   LQHPEGV  +P A P+WW    C   CF  W+ R+  + VL
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVGVLGHHRQREGKDPGQGGHSPGPAASDLRRQAARGRPHPGRLQHPEGVYPSPGAPPAWWPLSACSWRCFRLWVHRSGVIGVL 251          
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A3L6RNJ9_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RNJ9_PANMI)

HSP 1 Score: 218 bits (554), Expect = 9.700e-65
Identity = 118/152 (77.63%), Postives = 123/152 (80.92%), Query Frame = 3
Query:   51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW 506
            MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL VE SDTI+ VK KIQDKE  P  PA +HL  QA GGW H   LQH EG      A P  W
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLVVESSDTIDNVKAKIQDKEC-PG-PAEAHLCWQAVGGWPHPCRLQHSEGEHPPFGAPPEGW 226          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V2UIF5_TRYCR1.920e-7383.33Putative polyubiquitin n=2 Tax=Trypanosoma cruzi T... [more]
UPI0004F077E64.360e-7179.61polyubiquitin isoform X4 n=5 Tax=Neognathae TaxID=... [more]
A0A835ZEZ7_9STRA7.580e-7080.26Ubiquitin-related domain-containing protein n=4 Ta... [more]
A0A7J7KFQ4_BUGNE3.810e-6880.27Uncharacterized protein n=1 Tax=Bugula neritina Ta... [more]
A0A493TDE2_ANAPP7.200e-6787.97Uncharacterized protein n=1 Tax=Anas platyrhynchos... [more]
A0A7G2C2F1_9TRYP3.150e-6676.16Ubiquitin-2 like Rad60 SUMO-like/Ubiquitin family/... [more]
A0A446XU08_TRITD6.760e-6687.79Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A5J4ZMR4_9ASTE1.420e-6582.27Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A3B6PIP8_WHEAT5.730e-6568.57Uncharacterized protein n=1 Tax=Triticum aestivum ... [more]
A0A3L6RNJ9_PANMI9.700e-6577.63Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:3280641..3288509 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.8
Seed ortholog evalue1.3e-54
Seed eggNOG ortholog2880.D7FWC9
Preferred nameUBC
KEGG koko:K02927,ko:K04551,ko:K08770,ko:K12158
KEGG Pathwayko03010,ko03320,ko04137,ko04144,ko05012,ko05167,map03010,map03320,map04137,map04144,map05012,map05167
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0031386,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045116,GO:0070647,GO:0071704,GO:1901564
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0001@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121,ko04147
Exons3
Model size1375
Cds size345
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.126.1prot_D-herbacea_F_contig1.126.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1 3281621..3288459 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927398.2267256-UTR-D-herbacea_F_contig1:3280640..32816201622927398.2267256-UTR-D-herbacea_F_contig1:3280640..3281620Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1 3280641..3281620 -
1690790147.9458182-UTR-D-herbacea_F_contig1:3280640..32816201690790147.9458182-UTR-D-herbacea_F_contig1:3280640..3281620Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1 3280641..3281620 -
1622927398.2752116-UTR-D-herbacea_F_contig1:3288459..32885091622927398.2752116-UTR-D-herbacea_F_contig1:3288459..3288509Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1 3288460..3288509 -
1690790147.9875612-UTR-D-herbacea_F_contig1:3288459..32885091690790147.9875612-UTR-D-herbacea_F_contig1:3288459..3288509Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig1 3288460..3288509 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927398.2399752-CDS-D-herbacea_F_contig1:3281620..32816341622927398.2399752-CDS-D-herbacea_F_contig1:3281620..3281634Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 3281621..3281634 -
1690790147.9583204-CDS-D-herbacea_F_contig1:3281620..32816341690790147.9583204-CDS-D-herbacea_F_contig1:3281620..3281634Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 3281621..3281634 -
1622927398.2521353-CDS-D-herbacea_F_contig1:3285522..32858471622927398.2521353-CDS-D-herbacea_F_contig1:3285522..3285847Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 3285523..3285847 -
1690790147.9679034-CDS-D-herbacea_F_contig1:3285522..32858471690790147.9679034-CDS-D-herbacea_F_contig1:3285522..3285847Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 3285523..3285847 -
1622927398.2619317-CDS-D-herbacea_F_contig1:3288453..32884591622927398.2619317-CDS-D-herbacea_F_contig1:3288453..3288459Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 3288454..3288459 -
1690790147.9780364-CDS-D-herbacea_F_contig1:3288453..32884591690790147.9780364-CDS-D-herbacea_F_contig1:3288453..3288459Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1 3288454..3288459 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1.126.1

>prot_D-herbacea_F_contig1.126.1 ID=prot_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=115bp
MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIE
GVKQKIQDKEGHPA*
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mRNA from alignment at D-herbacea_F_contig1:3280641..3288509-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1.126.1 ID=mRNA_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7869bp|location=Sequence derived from alignment at D-herbacea_F_contig1:3280641..3288509- (Desmarestia herbacea DmunF female)
TACGTACAGGCGGAGCAGTCACACCAGGAACACCCAAGCGCCAACACAAC ATGCAAGTGAGTGTCATGGCGAAAGGGCCGCGGGGTTGTGTCCGAGCGTG AGATCCTGTCGTTCAGAGCGTGCTACTGGCTAGGCGAACTATAAATTGTG TGTGACGCAGTTCGGCAAATGTGCCGAAAAGCGAAGACACAACCAGGACG GAGCTCCTGATACGAGTAGTCGAAACAGGGATACATTTCGATGAACTATT ATTTCTTCCCTAGCACGACTCCACGTAGCTTTTGGCAATTTCAGACTTGC GCCGGGGTCAAGGCGTGTTGTTTCGTGTGTACGGCGTGCTATGCGTTGTT CGTTATGCGAGAGTAGCAGTACAGAGTACAGTATATTTATCGTAAAGCGA CTTGCGATTTTCAGGGGGTTTCTCTTGGGCCTTCCTTTGTACCCTTCCCC CGGGTGCAGTGTTTATTGTCAACCGGGCCGAAGGTGGGCACCATTAAATC AAGGCCTATCTGTAAGTGTCCCATGTAGTCGGCGGCTTGGGTATTTTATA GAATCATCCTGGCGTGAATGAGTCATACAGACACCCCCAAAAGCTGGCGA ACGACCCTGCATTTTGATTCATCACACACAGGAGTACGGGACAGCAACAG TCACCATCTAGACTACAGTCAGTAGTAGCTGGTAGGGCTATGACGAGCGC TACGCAAGCTAGCAACTTGGAAGGGTCGTGCCTTTGGCTTGACTCCTTGG TGTTGCTGGTCAAGCTGCCATGATATGCTCGTCACGTTCGATTAGGCTAT GGCTTCACCGTTCCCGACTTGTTTCACCATGTGCCTCGCTTACGACACAT CACCCAAAAGGACCGCTATGAGCAGTTTTTGGCCCAATTCGCATATTTTC AATTGGCATCGACGAAAGAAAGGTTCGTTGTTTTCTGTGTTTTGTCACGT TTTGTGTGCGTGTAAAATCTAGCTCGAGAGTCACAATGTTGCTGTCCAAT CGTTACGAGGCTGCCCTTCGGCTCTGGCCCCCGCTTTGCTTACCAATATA GCGAAACTCGTCAACATCTCGGCGCTTTTGCGTTTCTCCGCACCGTGATT GAGGGGAGAATTTCGAATGTCGAATACAACAGTGCGTACAGACAGTAGTA TATCAGATCATATTTCCCAAAATTATCCTGTAGAGCCTGGGACACCCCTG AGGAGCCACACTGCGTCATAAGCTGAGGATCGATAGAATCCCCGCGACCG ACGTATCACACAGTGAGGATGACGGTTATCCCCTGGCCCCCGAACCAGTT TGGAACGTCACGGCTGATGTCTTTTTAAGTAAAAATGGTACAGTAATGAA AAGCATGAGTTGGCCGTGCTGTGTGCTGTTCTGTGTTGCACTTGAAGTTG CCACGTGGTGCGTCCCTTTCCATCAAAATTTGCTGGCCGGCTGCTGACCC AATGTCGACGTTACCATGGCTGGGTTCCGAGATCTGACCACAAATCTTTT TCAAATATAACAGGTGGTATGTGATTGTAGAGTTGCGATTATCTATTACT ATCATGTATACACGCTTCGATGGGCTTGTTATTTATTATTTCAAGTTTCA AATACCTCAGCCGTGGCGTTCCAAACTGGTTCGGGAGCTCGGGAATAATC GAATAATGGCCAACTTCACTGACTGTATCATACTACTCGTACTACAACTA CTACTACTGTGTGTTACTGGAGTCTATCGGTCCTCTCATACTCGTAAACG TGTGTGTATTGGTAGTGTGCTTCTACTGTTGTATTGGCTGTACTATCATG GTAATGACTGTTGTACGGTCCGACGCAACGTTGTCTATCGACAGGCTTGC GACCATACTTTATAAATTGCCTTCGCGATTATCTTGTTAACCTTATTTTG GGGAGCCACTGCGCTATATACTGTACCTTGGACTCGTGGGTTCCCAACCT GTTGGAAGTTTTTTTTCACGGTTTTGGTATGGAAGATATTTGAAATTTGA AGTTCAGTTGTGTCCGTGCCCTTTACTCCATATCTGGTATGATATATCGA TTGTAAGCACTCACCCCCATTGCACCGTGTTCGACAGGGTCCTTAGCATA CAGTGTACTAATTCAAGACGTTTTTTTTCACTTTCGTAGGAGACATCATA CAGTACAGTAGTAGTAGTACAAGGTTGCCAAGGCTAAAGGACATACCCAT AGATTGACATGATATATTGTGTGGAGTATGGAGAGTGGAGAGGAACGGAA GGAGGTGCAAACAAGAAAGCGAAGCACAAAACGCTACGTACATACCTCGG TAAAGTCTATCTAAACAAACAGCATACGTCGAAGTATGATCATTACTATT ATTGGAAAAAATGTTGGGGATCAAAAACAGTACACTTCGAAGTATACCAC ATGCACAGGCCACGCGTTTCAGACCTGGAAAAATAGCCTTGTGCTTTCTT GTGTGTTTAGCGCACTTACCGCCTAAAAAGGTATACTCAGACGGAGATAC TCCCCATGTTAAGCTGTTGTGTACCTCGCTGTTTTACGTATCCCATCGCG TAAACAACAGTGGACGCTTCGTGTTTCGTTTTTGGTGTGAGATAACAAAT TTGAGAGGTGTGCCCGATATTGACACTAAATTAGCTCTCCGTTTTTTTGT CGTTTCTTTCAGATCTTCGTCAAAACACTTACCGGCAAGACCATCACCCT TGATGTGGAGCCGTCTGACACGATCGAGGGCGTGAAGCAGAAGATCCAGG ACAAGGAGGGTATCCCGCCCGACCAACAGCGTCTGATTTTCGCCGGCAAG CAGTTGGAGGACGGCCGCACGCTGTCGGACTACAACATCCAGAAGGAGTC GACCCTGCACCTTGTGTTGCGCCTTCGCGGTGGCATGCAGATCTTCGTGA AGACCCTGACGGGTAAGACGATCACGTTGGATGTGGAGCCGTCTGACACG ATTGAGGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCGCCTGA CCAGCAGCGTCTGATTTTCGCTGGCAAGCAATTGGAGGACGGTCGCACCC TGTCGGACTACAACATCCAGAAGGTATGGTCTTGTGTGCAATCGTTTCGA GCAGCTTGTTATTTTTTTGAATGGGCTGAGTTTTGTGCTTCTACAACAGT CAACTGTGCGCTCACCAACTGCACTTTTATTTTTCGCGTCCATGTCTTAA GGACTCTTTTGTCGGTCCTCTGTGCTTATCTTGCGCTCACTCTCAGCTCA CTTGATTATTTTTAAGGCTCACCCACGCTCCACCCGTCCCTGGCTTGCGC TCTTTTCCCAGGAGTCTACCTTGCACCTGGTCCTCCGGCTTCGCGGCGGC ATGCAGATCTTCGTCAAAACGTTGACCGGTAAGACGATCACTCTGGATGT CGAGCCGTCTGATACGATCGAGGGCGTGAAGCAGAAGATCCAGGACAAGG AGGGCATCCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGTTG GAGGACGGCCGCACTCTGTCGGACTACAACATCCAGAAGGAGTCGACCCT GCACCTCGTGCTGCGGCTTCGCGGGGGCATGCAGATCTTCGTGAAGACCC TGACGGGTAAGACGATTACTCTGGATGTGGAGCCGTCTGACACGATCGAA GGCGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCGCCTGACCAGCA GCGTTTGATCTTCGCCGGCAAGCAGTTGGAGGACGGTCGCACTCTGTCGG ACTACAACATCCAGAAGGTGCGCTTTTGAGTGCAATCGTTCTGCCGTGCA TGACACTGTTTTTTTCTTTTGCTCATTGCTGTGCTTACACATACTTTAAA AGAGTGGGATTTGCTGGACTGCCAGATACTCGTCACCTCGATGACGCACA CACCACCTATCCCCGTCGCTTACGCTTTTTTTCCAGGAGTCCACCTTGCA CCTGGTCCTCCGCCTTCGCGGCGGCATGCAGATCTTCGTGAAAACGTTGA CGGGTAAGACGATCACGTTGGATGTCGAGCCGTCTGACACGATTGAGGGC GTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAGCAGCG TCTGATTTTCGCCGGCAAGCAGCTGGAAGACGGCCGCACGCTGTCGGACT ACAACATCCAAAAGGAGTCCACCTTGCACCTGGTGCTGCGCCTTCGCGGG GGCATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACGATTACTCTGGA TGTGGAGCCGTCTGACACGATTGAGGGCGTGAAGCAGAAGATCCAGGACA AGGAGGGCATCCCGCCCGACCAGCAGCGTCTGATCTTCGCGGGCAAGCAG CTGGAGGACGGCCGCACTCTGTCGGACTACAACATCCAGAAGGAGTCGAC CCTGCACCTAGTGCTGCGCCTTCGCGGCGGCATGCAGATCTTCGTGAAGA CCCTGACGGGTAAGACGATCACTCTGGATGTGGAGCCGTCCGACACGATC GACAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA GCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACTCTGT CGGACTACAACATCCAGAAGGTGCGGGGTTGGTTGCGAGTAGAAACCGTT TTTTTAGCTCAAATGTAGGTTTAAGTCCACCCTGCACTTGGTGCTTCGCC TTCGCGGCGGCATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATC ACTCTGGAGGTCGAGCCGTCCGACTCCATCGACAACGTGAAGCAGAAGAT CCAGGACAAGGAGGGTATTCCTCCCGATCAACAGCGCCTGATCTTCGCTG GCAAGCAGCTGGAGGATGGTCGTACTCTGTCGGACTACAACATTCAGAAG GAGTCCACCCTACACTTGGTGCTTCGCCTGAGAGGAGGCATGCAGATCTT CGTGAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGCCTTCCG ACTCCATCGACAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCT CCCGATCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCG TACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTACACTTGGTGC TTCGCCTGAGAGGAGGCATGCAGATCTTCGTGAAGACTCTCACCGGCAAG ACCATCACTCTGGAGGTCGAGCCTTCCGACTCCATCGACAACGTGAAGCA GAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAAGCAGCGCCTGATC TTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTGGCTGATTACAACAT CCAGAAGGAGTCCACCCTGCACCTTGTGCTTCGCCTGAGCGGCGGCATGC AGATCTTCGTGAAGACCCTCACGGGTAAGACGATCACTCTGGATGTGAGA TCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCG GGCAAGCAGCTGGAGGACGGCCGCACTCTGTCGGACTACAACATCCAGAA GGAGTCGACCCTGCACCTAGTGCTGCGCCTTCGCGGCGGCATGCAGATCT TCGTGAAGACCCTGACGGGTAAGACGATCACGTTGGATGTGGAGCCGTCT GACACGATCGAGGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCC GCCCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCC GCACTCTGTCGGACTACAACATCCAGAAGGTGCGGGGTTGGTTGCGAGTA GAAACCGTTTTTTTAGCTCAAATGTAGGTTTACTGCCTACTTGAGGTTGC CAAGAGGGAGGGTTCTGTTTTCCTTGCTGTAATGTCGTATTTCAACCGTA TATAACCGAGTCGCATCGCCTTAACGTCGTAGGCACGTGAAAGTTAGTTA TGGTTCGGTATTCCTTACGGTAGTGTTGTGTCAACCATACTTGACTGCAT CGCATCGCTTTGACGTCCTTCTCATCTTGTGCCCCGTCCTCTTCCTCCAG GAGTCCACCTTGCACTTGGTGCTGCGCCTTCGCGGCGGCATGCAGATCTT CGTAAAGACCCTGACGGGTAAGACGATTACTCTGGATGTGGAGCCGTCTG ACACGATCGAGGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCG CCTGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCG CACTCTGTCGGACTACAACATCCAGAAGGAATCGACCTTGCACCTGGTCC TCCGCCTTCGCGGCGGCATGCAGATCTTCGTGAAGACCCTGACGGGTAAG ACGATCACGTTGGATGTGGAGCCGTCTGACACGATTGAGGGCGTGAAGCA AAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGTCTCATCT TCGCGGGCAAGCAGCTGGAGGATGGTCGCACTTTGTCGGACTACAACATC CAGAAGGAGTCCACCTTGCACCTGGTCCTCCGCCTTCGCGGCGGCATGCA GATCTTCGTGAAGACCCTGACGGGTAAGACGATCACGTTGGATGTGGAGC CGTCTGACACGATTGAGGGCGTAAAGCAGAAGATCCAGGACAAAGAGGGC ATCCCGCCTGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGA CGGCCGCACTTTGTCGGACTACAACATCCAGAAGGAGTCCACCTTGCACC TGGTCCTCCGCCTTCGCGGCGGCATGCAGATCTTCGTGAAGACCCTGACG GGTAAGACGATCACGTTGGATGTGGAGCCGTCTGACACGATTGAGGGCGT GAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGTC TCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTAC AACATCCAGAAGGAGTCGACCTTGCACCTTGTGCTGCGCCTTCGTGGTGG TGACCTTTAGAGTGTTGCTTTGTGTGCTGGCTGGCGAGGACGTCGAGCTT GCCAGTACTCGCGAAAAATGACACCGTGTTGTAGGGGGGCTGAGTCTAGG CGGTAGTAGCACTTTCCAGCCGGTTTTTCCCACGTGAAGTTAGGGGTGTG CTGTGTATATATAGCGAAGCTCGATGGACTTCGACTGGTGGATACCTCAT CACGTTGTTCCTGATTTGTGTCGCGTGATGGATATGATCAACCGGTGGTG GGTGTGGTGTCAAATAATAAAATGAAGATTTATTTTTGTAAAGTTTGCAC ATCATTGTGGAACGAAGGACAGGATAACGGGTCCTTTGCCCGTTATTTTA AATTATGCTATTTTCTGTGTTGAACGGAACCTCGACCCTTCAAGGAAGAC GTGTGTTTCCAAGGGTAACAATTGACGAAGGTCGTCCGTTTCGCTCTAAG GGCGATGAATAGAGTGCGCATAATGACCGTTACACTACGAGTACAAACTA GAAGTTGTCCATTCAGTTCATTGTCCGTTCTTTCGTCGTAGTTGTTAAAA CACGTTTCGGTTGTTGTCCCTTTTGGTACTTGAACAAACATGAAATTCAG GGGGGGGCGCCCGTCCATGAAGTACGAGTAATGTACAATGGAATATACAT AAAAACATGATGTAATGGATTTTTACGTGTTGCGGAGTGCTTCAGCTGTC AGTGGACCGCGGGGTTCTATTTTAACCATCGACTTCGTGAAGGAATCGCA TACATAATAGATCCTCTTTTTTTTTGTATCATACACGTTGTTCTGGGTCG ATTGTGGCTGATGTCGCCTTGAGTTTTTCCATGTGCATCATCTTCTGATT GGCTATTTATTAATACGTA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1:3280641..3288509-

>mRNA_D-herbacea_F_contig1.126.1 ID=mRNA_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=690bp|location=Sequence derived from alignment at D-herbacea_F_contig1:3280641..3288509- (Desmarestia herbacea DmunF female)
ATGCAAATGCAAATCTTCGTCAAAACACTTACCGGCAAGACCATCACCCT
TGATGTGGAGCCGTCTGACACGATCGAGGGCGTGAAGCAGAAGATCCAGG
ACAAGGAGGGTATCCCGCCCGACCAACAGCGTCTGATTTTCGCCGGCAAG
CAGTTGGAGGACGGCCGCACGCTGTCGGACTACAACATCCAGAAGGAGTC
GACCCTGCACCTTGTGTTGCGCCTTCGCGGTGGCATGCAGATCTTCGTGA
AGACCCTGACGGGTAAGACGATCACGTTGGATGTGGAGCCGTCTGACACG
ATTGAGGGCGTGAAGCAGAAGATCCAGGACAAGGAGGATCTTCGTCAAAA
CACTTACCGGCAAGACCATCACCCTTGATGTGGAGCCGTCTGACACGATC
GAGGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCA
ACAGCGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACGCTGT
CGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTTGTGTTGCGCCTT
CGCGGTGGCATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACGATCAC
GTTGGATGTGGAGCCGTCTGACACGATTGAGGGCGTGAAGCAGAAGATCC
AGGACAAGGAGGGGCATCCCGCCTGAGGCATCCCGCCTGA
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