mRNA_D-herbacea_F_contig1.126.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A2V2UIF5_TRYCR (Putative polyubiquitin n=2 Tax=Trypanosoma cruzi TaxID=5693 RepID=A0A2V2UIF5_TRYCR) HSP 1 Score: 240 bits (613), Expect = 1.920e-73 Identity = 125/150 (83.33%), Postives = 130/150 (86.67%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPS 500
MQIFVKTLTGKTI L+VE SDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTIE VK KIQDKEGH A PAA L QAAGG H+ LQHPEGV APCAAP+
Sbjct: 77 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGHSAGPAAPDLCWQAAGGRPHARRLQHPEGVHAAPCAAPA 226
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: UPI0004F077E6 (polyubiquitin isoform X4 n=5 Tax=Neognathae TaxID=8825 RepID=UPI0004F077E6) HSP 1 Score: 231 bits (588), Expect = 4.360e-71 Identity = 121/152 (79.61%), Postives = 124/152 (81.58%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW 506
MQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTIE VK KIQDKE AG W+H V LQHPEGV CAAP W
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---------------AGRWTHPVRLQHPEGVHSPSCAAPERW 137
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A835ZEZ7_9STRA (Ubiquitin-related domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A835ZEZ7_9STRA) HSP 1 Score: 236 bits (601), Expect = 7.580e-70 Identity = 122/152 (80.26%), Postives = 129/152 (84.87%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW 506
MQIFVKTLTGKTITLDVEPSDTI+ VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ + + + GHP PAA R QAAGG H LQHPEGV + AAP+WW
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDKREAEDPRQGGHPPRPAAPDFRWQAAGGRPHPQRLQHPEGVYSSLGAAPAWW 304
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A7J7KFQ4_BUGNE (Uncharacterized protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KFQ4_BUGNE) HSP 1 Score: 224 bits (570), Expect = 3.810e-68 Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCA 491
MQIFVKTLTGKTITL+VE SDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIE VK KIQDK +P A ++L R+AA W +S LQHPEG+ A CA
Sbjct: 26 MQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKR-NPTRSAKTYLCRKAARRWQNSFRLQHPEGIHPASCA 171
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A493TDE2_ANAPP (Uncharacterized protein n=1 Tax=Anas platyrhynchos platyrhynchos TaxID=8840 RepID=A0A493TDE2_ANAPP) HSP 1 Score: 222 bits (565), Expect = 7.200e-67 Identity = 117/133 (87.97%), Postives = 119/133 (89.47%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSV 449
MQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTIE VK KIQDKEG P LR QAAGGWSH V
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQVD-LRWQAAGGWSHPV 208
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A7G2C2F1_9TRYP (Ubiquitin-2 like Rad60 SUMO-like/Ubiquitin family/Ubiquitin-like domain containing protein, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=A0A7G2C2F1_9TRYP) HSP 1 Score: 219 bits (559), Expect = 3.150e-66 Identity = 115/151 (76.16%), Postives = 122/151 (80.79%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSW 503
MQIFVKTLTGKTI L+VE SDTIE VK KIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI L+VE SDTIE VK KIQDKEG P + H+ GLQHPEGVD AP A P+W
Sbjct: 1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRHARGLQHPEGVDAAPRAPPAW 151
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A446XU08_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446XU08_TRITD) HSP 1 Score: 226 bits (575), Expect = 6.760e-66 Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSH 443
MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGHP PAASHLR QAA GW H
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGHPPGPAASHLRWQAARGWPH 131
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A5J4ZMR4_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZMR4_9ASTE) HSP 1 Score: 222 bits (565), Expect = 1.420e-65 Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGV 473
MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEG P AS L R+A GG +HS GLQH E V
Sbjct: 129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQASDLCRKATGGRAHSCGLQHTERV 269
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A3B6PIP8_WHEAT (Uncharacterized protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6PIP8_WHEAT) HSP 1 Score: 219 bits (558), Expect = 5.730e-65 Identity = 120/175 (68.57%), Postives = 131/175 (74.86%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW*PLEC---CFVCWLARTSSLPVL 566
MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+V + K + GH PAAS LRRQAA G H LQHPEGV +P A P+WW C CF W+ R+ + VL
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVGVLGHHRQREGKDPGQGGHSPGPAASDLRRQAARGRPHPGRLQHPEGVYPSPGAPPAWWPLSACSWRCFRLWVHRSGVIGVL 251
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Match: A0A3L6RNJ9_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RNJ9_PANMI) HSP 1 Score: 218 bits (554), Expect = 9.700e-65 Identity = 118/152 (77.63%), Postives = 123/152 (80.92%), Query Frame = 3
Query: 51 MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGHPA*PAASHLRRQAAGGWSHSVGLQHPEGVDLAPCAAPSWW 506
MQIFVKTLTGKTITL+VE SDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL VE SDTI+ VK KIQDKE P PA +HL QA GGW H LQH EG A P W
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLVVESSDTIDNVKAKIQDKEC-PG-PAEAHLCWQAVGGWPHPCRLQHSEGEHPPFGAPPEGW 226 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1.126.1 >prot_D-herbacea_F_contig1.126.1 ID=prot_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=115bp MQIFVKTLTGKTITLDVEPSDTIEGVKQKIQDKEGIPPDQQRLIFAGKQLback to top mRNA from alignment at D-herbacea_F_contig1:3280641..3288509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1.126.1 ID=mRNA_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7869bp|location=Sequence derived from alignment at D-herbacea_F_contig1:3280641..3288509- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1:3280641..3288509- >mRNA_D-herbacea_F_contig1.126.1 ID=mRNA_D-herbacea_F_contig1.126.1|Name=mRNA_D-herbacea_F_contig1.126.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=690bp|location=Sequence derived from alignment at D-herbacea_F_contig1:3280641..3288509- (Desmarestia herbacea DmunF female)back to top |