mRNA_D-herbacea_F_contig1159.1158.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE) HSP 1 Score: 330 bits (846), Expect = 1.560e-102 Identity = 186/514 (36.19%), Postives = 289/514 (56.23%), Query Frame = 1
Query: 1 EPQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVNALMNVG 1440
EP S ++A +S E W+ A E GL+ G ++ + P G V+ + ++ K E G++VK K R VA+GF+Q G+ Y + SPT AASIR+ +A A ++EL H+D EQA++ +D ++++LP V +LNK++YGL QA R + MRL +DLK +GFEQS +DPCV R + ++ ++ +HVDD+L +K ET V L + K+LGE +++GC RDR ++ Q Y R++ ERF + +T+ +PA+ AG P VR VA+ P ++HWKA KIL Y+ T + + D + +VD+D A+ RRS SG V + G + W SR Q A+ TSEAEY+AM + VKE LF + F+ P+ +S + ++EDN+GAI +A+N SS R +HID++HH +R +EG++++++V +++QHAD+LTK L R +FE H N ++ +
Sbjct: 166 EPDSYQEARQSKHAEVWDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDILYAG-SKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLS 678
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 328 bits (842), Expect = 1.390e-101 Identity = 189/503 (37.57%), Postives = 282/503 (56.06%), Query Frame = 1
Query: 1 EPQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMF 1407
EP S ++A+ S W+ A E+ GLI G +T + P+G V+ + ++ K E G++VK K R VA+GF+Q G+ Y E+ SPT AASIR+ +A A ++EL H+D EQA+ + +D E+ ++LP + +LNK++YGL QA R + RL +DL +GFEQS +DPCV R + ++ I+ +HVDD+L TK E V L + K+LGE +++GC +RDR ++ Q Y R++ ERF I +T+ +PA+ AG P AVRTVA+ P + WKA KIL Y++ T + Y D +VD+D A+ RRS SG VL+ G +SWFS Q + TSEAEY+AM + VKE LF+ + + P+ + +D+ EDN+GAI +A N SS R++HID++HH +R+ +EG + VT+V +++QHAD+LTK L R +F
Sbjct: 212 EPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 328 bits (840), Expect = 5.000e-99 Identity = 186/505 (36.83%), Postives = 284/505 (56.24%), Query Frame = 1
Query: 4 PQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 1416
P S ++A S + WE A E+ GLI G +T + P V+ + ++ K E G++VK K R VA+GF+Q G+ Y E+ SPT AAS R+ +A A ++EL H D EQA++ +++D E++++LP V +LNK++YGL QA R + RL ++LK +GFEQS +DPCV R + ++ ++ +HVDD+L TK E V L + K+LGE +++GC RDR ++ Q Y R++ ERF + +T+ +PA+ AG P AVR VA+ P +HWKA KIL Y+ T + + D + +VD+D A+ + RRS SG VL+ + W S+ Q ++ TSEAEY+AM + VKE LF+ + F+ P+ + +D++EDN+GAI +A N SS R++HID++HH +R+ +EG + VT+V +E+QHAD+LTK L R +FE H
Sbjct: 448 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 951
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 330 bits (846), Expect = 5.460e-98 Identity = 187/505 (37.03%), Postives = 285/505 (56.44%), Query Frame = 1
Query: 4 PQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 1416
P S ++A S + WE A E+ GLI G +T + P G V+ + ++ K E G++VK K R VA+GF+Q G+ Y E+ SPT AAS R+ +A A ++EL H D EQA++ +++D E++++LP V +LNK++YGL QA R + RL ++LK +GFEQS +DPCV R + ++ ++ +HVDD+L TK E V L + K+LGE +++GC RDR ++ Q Y R++ ERF + +T+ +PA+ AG P AVR VA+ P +HWKA KIL Y+ T + + D + +VD+D A+ + RRS SG VL+ + W S+ Q ++ TSEAEY+AM + VKE LF+ + F+ P+ + +D++EDN+GAI +A N SS R++HID++HH +R+ +EG + VT+V +E+QHAD+LTK L R +FE H
Sbjct: 715 PDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 1218
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 330 bits (845), Expect = 2.400e-97 Identity = 186/506 (36.76%), Postives = 285/506 (56.32%), Query Frame = 1
Query: 1 EPQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 1416
EP S +A S + WE A E+ GL+ G +T + P G V+ + ++ K E G++VK K R VA+GF+Q G+ Y E+ SPT AAS R+ +A A ++EL H D EQA++ +++D E+++++P + V +LNK++YGL QA R + RL ++LK +GFEQS +DPCV R + ++ ++ +HVDD+L TK E V L + K+LGE +++GC RDR ++ Q Y R++ ERF I +T+ +PA+ AG P AVR VA+ P +HWKA KIL Y+ T + + D + +VD+D A+ RRS SG V + + W SR Q ++ TSEAEY+AM + VKE LF+ + F+ P+++ +D++EDN+GAI +A N SS R++HID++HH +R+ +EG + VT+V +++QHAD+LTK L R +FE H
Sbjct: 888 EPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1392
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE) HSP 1 Score: 325 bits (834), Expect = 1.130e-96 Identity = 184/506 (36.36%), Postives = 284/506 (56.13%), Query Frame = 1
Query: 1 EPQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 1416
EP S +A S + WE A E+ GL+ G +T + P G V+ + ++ K E G++VK K R VA+GF+Q G+ Y E+ SPT AAS R+ +A A ++EL H D EQA++ +++D E+++++P + V +LNK++YGL QA R + RL ++LK +GFEQS +DPCV + ++ ++ +HVDD+L TK E V L + K+LGE +++GC RDR ++ Q Y R++ ERF I +T+ +PA+ AG P AVR VA+ P +HWKA KIL Y+ T + + D + +VD+D A+ RRS SG V + + W SR Q ++ TSE+EY+AM + VKE LF+ + F+ P+++ +D++EDN+GAI +A N SS R++HID++HH +R+ +EG + VT+V +++QHAD+LTK L R +FE H
Sbjct: 678 EPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1182
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 317 bits (811), Expect = 3.610e-93 Identity = 189/497 (38.03%), Postives = 270/497 (54.33%), Query Frame = 1
Query: 49 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPATAGV-------------KPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVNALMNV 1437
W+ A K EM G G +++ + P+G+ + TK ++ K E+G + K R VA+GF Q+ G Y SSS PA +SI++A+A A + RH D +QAY A + E+Y+ + + V K+ +A+YGL Q+GR W N L G+EQ RADPCVFRK V GK+ +I+V++VDD++ + ++E E + LR T +KDLGE ++Y GC I RD Q Y + +RFGI TA PA KP+ A+ V + P M WKA+V+IL Y+ T GITY G+G + +VD+ +A RRS +G AV +GG +S S+ Q + TSEAEY+A E VKE LF+R V +FI P + ++EDNQGAI + N SS R++HID++ H IR+ G++ V Y+ T++QHAD+LTK L R E H NALMN+
Sbjct: 751 WDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVG-SEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVR-GSGLD-LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 317 bits (811), Expect = 3.890e-92 Identity = 189/497 (38.03%), Postives = 270/497 (54.33%), Query Frame = 1
Query: 49 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPATAGV-------------KPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVNALMNV 1437
W+ A K EM G G +++ + P+G+ + TK ++ K E+G + K R VA+GF Q+ G Y SSS PA +SI++A+A A + RH D +QAY A + E+Y+ + + V K+ +A+YGL Q+GR W N L G+EQ RADPCVFRK V GK+ +I+V++VDD++ + ++E E + LR T +KDLGE ++Y GC I RD Q Y + +RFGI TA PA KP+ A+ V + P M WKA+V+IL Y+ T GITY G+G + +VD+ +A RRS +G AV +GG +S S+ Q + TSEAEY+A E VKE LF+R V +FI P + ++EDNQGAI + N SS R++HID++ H IR+ G++ V Y+ T++QHAD+LTK L R E H NALMN+
Sbjct: 1304 WDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVG-SEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVR-GSGLD-LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE) HSP 1 Score: 302 bits (773), Expect = 6.590e-92 Identity = 180/508 (35.43%), Postives = 271/508 (53.35%), Query Frame = 1
Query: 1 EPQSRRQAMESPEWECWEAAEKTEMGGLI-SKGVWTQCPRPKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVN 1422
EP S ++A +S + W+ A E GL S+ V ++ +G++VK K R VA+GF+Q G+ Y E+ SPT AASIR+ +A A D+E H D EQA++ +++D E++++LP V +L+K++YGL QA R ++ RL +DLK +GFEQS +DPCV + ++ ++ +HVDD+L + + A E V L + K+LGE +++GC RDR ++ Q Y R++ ERF + +T+ +PA+ AG P AVR VA+ P +HWKA KIL Y+ T + Y D +VD+D A+ RRS SG VL+ ++W SR Q T+EAEYVAM + VKE LF++ + F+ P+ + + EDN+GAI +A N SS ++HID++HHL R+ +EG + + +V +E QHAD+LTK L R FE H N
Sbjct: 169 EPSSYKEARQSKYFSIWDKAMSAEFEGLFKSRNV---------------------RVSSKGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYDLEFLHFDIEQAFVQSELDHEVFMKLPPGCESMTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEVLGMIAIHVDDILYAGIERLA-EMVVEALGDSLPTKNLGEVRFFLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPASLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRIGKIQVREDNEGAIALAENPLSSCNSKHIDVRHHLFRNLTEEGVLEIRHVSSEGQHADILTKALPRGCFEVHRN 654
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 315 bits (808), Expect = 7.620e-92 Identity = 188/501 (37.52%), Postives = 279/501 (55.69%), Query Frame = 1
Query: 1 EPQSRRQAMESPEWECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTV-MRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDR 1398
EP S ++A +S W+ A E+ GLI G +T + P G V+ + ++ K E G++VK K R VA+GFRQ G+ Y E+ SPT AASIR+ +A A D+EL H D EQA++ + +D E++++LP V +LNK++YGL QA R + RL +DLK +GFEQS +DPCV R + ++ ++ +HVDD+L TK + V L + K+LGE +++GC RDR ++ Q Y R++ ERF I +T+ +PA+ AG P AVR VA+ P WKA KIL Y+ T + Y D V +VD+D A+ RRS SG V++ ++W S Q ++ TSEAEY+AM + VKE LF+ + F+ P++E +D++EDN+GAI +A N SS R++HID++HH +R+ +EG + +T+V +E QHAD+LTK L R
Sbjct: 779 EPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDILYAG-TKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPASPANDNRSVMEDEEAGDVPFREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPR 1278 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1159.1158.1 >prot_D-herbacea_F_contig1159.1158.1 ID=prot_D-herbacea_F_contig1159.1158.1|Name=mRNA_D-herbacea_F_contig1159.1158.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=473bp MESPEWECWEAAEKTEMGGLISKGVWTQCPRPKGKVVLGTKRLYSRKIGEback to top mRNA from alignment at D-herbacea_F_contig1159:57897..59459- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1159.1158.1 ID=mRNA_D-herbacea_F_contig1159.1158.1|Name=mRNA_D-herbacea_F_contig1159.1158.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1563bp|location=Sequence derived from alignment at D-herbacea_F_contig1159:57897..59459- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1159:57897..59459- >mRNA_D-herbacea_F_contig1159.1158.1 ID=mRNA_D-herbacea_F_contig1159.1158.1|Name=mRNA_D-herbacea_F_contig1159.1158.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2838bp|location=Sequence derived from alignment at D-herbacea_F_contig1159:57897..59459- (Desmarestia herbacea DmunF female)back to top |