prot_D-herbacea_F_contig1159.1158.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1159.1158.1
Unique Nameprot_D-herbacea_F_contig1159.1158.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length473
Homology
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.440e-100
Identity = 181/500 (36.20%), Postives = 281/500 (56.20%), Query Frame = 0
Query:    7 ECWEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVNALMNVG 472
            E W+ A   E  GL+  G ++   + P G  V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y  + SPT  AASIR+ +A A   ++EL H+D EQA++   +D  ++++LP         V +LNK++YGL QA R + MRL +DLK +GFEQS +DPCV R  +  ++  ++ +HVDD+L    +K   ET V  L  +   K+LGE  +++GC   RDR    ++  Q  Y R++ ERF + +T+ +PA+             AG  P                      VR VA+    P ++HWKA  KIL Y+  T    + +  D +       +VD+D A+    RRS SG  V + G  + W SR Q   A+ TSEAEY+AM + VKE LF   +  F+ P+ +S  + ++EDN+GAI +A+N  SS R +HID++HH +R   +EG++++++V +++QHAD+LTK L R +FE H N ++ + 
Sbjct:  180 EVWDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDILYAG-SKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLS 678          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 4.550e-100
Identity = 184/487 (37.78%), Postives = 274/487 (56.26%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMF 461
            W+ A   E+ GLI  G +T   + P+G  V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y E+ SPT  AASIR+ +A A   ++EL H+D EQA+  + +D E+ ++LP         + +LNK++YGL QA R +  RL +DL  +GFEQS +DPCV R  +  ++  I+ +HVDD+L    TK   E  V  L  +   K+LGE  +++GC  +RDR    ++  Q  Y R++ ERF I +T+ +PA+             AG  P                     AVRTVA+    P  + WKA  KIL Y++ T    + Y  D         +VD+D A+    RRS SG  VL+ G  +SWFS  Q   +  TSEAEY+AM + VKE LF+  +   + P+ +   +D+ EDN+GAI +A N  SS R++HID++HH +R+  +EG + VT+V +++QHAD+LTK L R +F
Sbjct:  228 WDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 4.010e-98
Identity = 182/490 (37.14%), Postives = 277/490 (56.53%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 464
            WE A   E+ GLI  G +T   + P    V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y E+ SPT  AAS R+ +A A   ++EL H D EQA++ +++D E++++LP         V +LNK++YGL QA R +  RL ++LK +GFEQS +DPCV R  +  ++  ++ +HVDD+L    TK   E  V  L  +   K+LGE  +++GC   RDR    ++  Q  Y R++ ERF + +T+ +PA+             AG  P                     AVR VA+    P  +HWKA  KIL Y+  T    + +  D +       +VD+D A+  + RRS SG  VL+    + W S+ Q   ++ TSEAEY+AM + VKE LF+  +  F+ P+ +   +D++EDN+GAI +A N  SS R++HID++HH +R+  +EG + VT+V +E+QHAD+LTK L R +FE H
Sbjct:  463 WEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 951          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 4.080e-97
Identity = 183/490 (37.35%), Postives = 278/490 (56.73%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 464
            WE A   E+ GLI  G +T   + P G  V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y E+ SPT  AAS R+ +A A   ++EL H D EQA++ +++D E++++LP         V +LNK++YGL QA R +  RL ++LK +GFEQS +DPCV R  +  ++  ++ +HVDD+L    TK   E  V  L  +   K+LGE  +++GC   RDR    ++  Q  Y R++ ERF + +T+ +PA+             AG  P                     AVR VA+    P  +HWKA  KIL Y+  T    + +  D +       +VD+D A+  + RRS SG  VL+    + W S+ Q   ++ TSEAEY+AM + VKE LF+  +  F+ P+ +   +D++EDN+GAI +A N  SS R++HID++HH +R+  +EG + VT+V +E+QHAD+LTK L R +FE H
Sbjct:  730 WEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 1218          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.400e-96
Identity = 181/490 (36.94%), Postives = 278/490 (56.73%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 464
            WE A   E+ GL+  G +T   + P G  V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y E+ SPT  AAS R+ +A A   ++EL H D EQA++ +++D E+++++P       + V +LNK++YGL QA R +  RL ++LK +GFEQS +DPCV R  +  ++  ++ +HVDD+L    TK   E  V  L  +   K+LGE  +++GC   RDR    ++  Q  Y R++ ERF I +T+ +PA+             AG  P                     AVR VA+    P  +HWKA  KIL Y+  T    + +  D +       +VD+D A+    RRS SG  V +    + W SR Q   ++ TSEAEY+AM + VKE LF+  +  F+ P+++   +D++EDN+GAI +A N  SS R++HID++HH +R+  +EG + VT+V +++QHAD+LTK L R +FE H
Sbjct:  904 WEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1392          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.190e-95
Identity = 179/490 (36.53%), Postives = 277/490 (56.53%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 464
            WE A   E+ GL+  G +T   + P G  V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y E+ SPT  AAS R+ +A A   ++EL H D EQA++ +++D E+++++P       + V +LNK++YGL QA R +  RL ++LK +GFEQS +DPCV    +  ++  ++ +HVDD+L    TK   E  V  L  +   K+LGE  +++GC   RDR    ++  Q  Y R++ ERF I +T+ +PA+             AG  P                     AVR VA+    P  +HWKA  KIL Y+  T    + +  D +       +VD+D A+    RRS SG  V +    + W SR Q   ++ TSE+EY+AM + VKE LF+  +  F+ P+++   +D++EDN+GAI +A N  SS R++HID++HH +R+  +EG + VT+V +++QHAD+LTK L R +FE H
Sbjct:  694 WEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVH 1182          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.030e-93
Identity = 189/497 (38.03%), Postives = 270/497 (54.33%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPATAGV-------------KPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVNALMNV 471
            W+ A K EM G    G +++  + P+G+  + TK ++  K  E+G +   K R VA+GF Q+ G  Y  SSS  PA +SI++A+A A    +  RH D +QAY  A +  E+Y+ + +        V K+ +A+YGL Q+GR W     N L   G+EQ RADPCVFRK V GK+ +I+V++VDD++ +  ++E  E  +  LR T  +KDLGE ++Y GC I RD         Q  Y   + +RFGI  TA  PA                 KP+                    A+  V +    P M  WKA+V+IL Y+  T   GITY   G+G   +  +VD+ +A     RRS +G AV +GG  +S  S+ Q   +  TSEAEY+A  E VKE LF+R V +FI P      + ++EDNQGAI +  N  SS R++HID++ H IR+    G++ V Y+ T++QHAD+LTK L R   E H NALMN+
Sbjct:  751 WDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVG-SEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVR-GSGLD-LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.210e-92
Identity = 189/497 (38.03%), Postives = 270/497 (54.33%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPATAGV-------------KPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKHVNALMNV 471
            W+ A K EM G    G +++  + P+G+  + TK ++  K  E+G +   K R VA+GF Q+ G  Y  SSS  PA +SI++A+A A    +  RH D +QAY  A +  E+Y+ + +        V K+ +A+YGL Q+GR W     N L   G+EQ RADPCVFRK V GK+ +I+V++VDD++ +  ++E  E  +  LR T  +KDLGE ++Y GC I RD         Q  Y   + +RFGI  TA  PA                 KP+                    A+  V +    P M  WKA+V+IL Y+  T   GITY   G+G   +  +VD+ +A     RRS +G AV +GG  +S  S+ Q   +  TSEAEY+A  E VKE LF+R V +FI P      + ++EDNQGAI +  N  SS R++HID++ H IR+    G++ V Y+ T++QHAD+LTK L R   E H NALMN+
Sbjct: 1304 WDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVG-SEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVR-GSGLD-LEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 5.400e-91
Identity = 174/484 (35.95%), Postives = 268/484 (55.37%), Query Frame = 0
Query:   16 EMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPATA------------GVKP----------------------LAVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDRRMFEKH 464
            E+ GLI  G +T   + P G  V+  + ++  K  E G++VK K R VA+GF+Q  G+ Y E+ SPT  AAS R+ +A A   ++EL H D EQA++ +++D E++++LP         V +LNK++Y L Q  R +  RL ++LK +GFEQS +DPCV R  +  ++  ++ +HVDD+L    TK   E  V  L  +   K+LGE  +++GC   RDR     +  Q  Y R++ ++F +  T+  PA+             G K                       +A R VA+   NP    WKA  KIL Y+  T    + +  D +       +VD+D A+  + RRS SG  VL+    + W S+ Q   ++ TSEAEY+AM + VKE LF+  +  F+ P+ +   +D++EDN+GAI +A N  SS R++HID++HH +R+  +EG + VT+V +E+QHAD+LTK L R +FE H
Sbjct:    4 EVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADEIGKIVKAKARLVAKGFKQKYGVDYVETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYELKQESRTFYNRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDREAGTKEISQESYIRSVLDKFNVCSTSSTPASPANDNNRSLKEDEGAKDVPFREVVGSLMWIANRTRCDINIATRAVARQSHNPKKRDWKASQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 486          
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.320e-90
Identity = 183/485 (37.73%), Postives = 271/485 (55.88%), Query Frame = 0
Query:    9 WEAAEKTEMGGLISKGVWTQCPR-PKGKVVLGTKRLYSRKIGERGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDMELRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRCWNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTKEAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTITERFGIDKTAMVPAT-------------AGVKPL--------------------AVRTVAKFCENPGMAHWKAVVKILQYVRRTPKRGITYGGDGNGRTV-MRAFVDSDHATCLDTRRSTSGGAVLLGGGAISWFSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVEDNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHADVLTKPLDR 458
            W+ A   E+ GLI  G +T   + P G  V+  + ++  K  E G++VK K R VA+GFRQ  G+ Y E+ SPT  AASIR+ +A A   D+EL H D EQA++ + +D E++++LP         V +LNK++YGL QA R +  RL +DLK +GFEQS +DPCV R  +  ++  ++ +HVDD+L    TK   +  V  L  +   K+LGE  +++GC   RDR    ++  Q  Y R++ ERF I +T+ +PA+             AG  P                     AVR VA+    P    WKA  KIL Y+  T    + Y  D     V    +VD+D A+    RRS SG  V++    ++W S  Q   ++ TSEAEY+AM + VKE LF+  +  F+ P++E   +D++EDN+GAI +A N  SS R++HID++HH +R+  +EG + +T+V +E QHAD+LTK L R
Sbjct:  795 WDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDILYAG-TKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPASPANDNRSVMEDEEAGDVPFREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPR 1278          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1159.1158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPV1_9PHAE1.440e-10036.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE4.550e-10037.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE4.010e-9837.14Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE4.080e-9737.35Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KZH7_9PHAE2.400e-9636.94Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3I1_9PHAE1.190e-9536.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKS3_9PHAE2.030e-9338.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE2.210e-9238.03Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9B2_9PHAE5.400e-9135.95Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JB16_9PHAE1.320e-9037.73Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 25..260
e-value: 2.4E-47
score: 161.6
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 23..457
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 120..424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1159contigD-herbacea_F_contig1159:57897..59435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1159.1158.1mRNA_D-herbacea_F_contig1159.1158.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1159 57897..59459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1159.1158.1 ID=prot_D-herbacea_F_contig1159.1158.1|Name=mRNA_D-herbacea_F_contig1159.1158.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=473bp
MESPEWECWEAAEKTEMGGLISKGVWTQCPRPKGKVVLGTKRLYSRKIGE
RGEVVKHKCRFVAQGFRQIKGLHYEESSSPTPAAASIRMALATAAVMDME
LRHIDFEQAYLLADVDTEIYIELPEEYREFPDAVGKLNKAIYGLVQAGRC
WNMRLTNDLKTLGFEQSRADPCVFRKFVAGKMEAILVVHVDDLLALTVTK
EAMETFVGELRSTFKIKDLGEASYYMGCHITRDRAKKELKFDQHLYARTI
TERFGIDKTAMVPATAGVKPLAVRTVAKFCENPGMAHWKAVVKILQYVRR
TPKRGITYGGDGNGRTVMRAFVDSDHATCLDTRRSTSGGAVLLGGGAISW
FSRAQATTAEGTSEAEYVAMSEIVKEVLFLRQVQAFIMPALESNPVDIVE
DNQGAIKMANNRHSSKRTRHIDIKHHLIRDAVDEGKVRVTYVKTEDQHAD
VLTKPLDRRMFEKHVNALMNVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2