mRNA_D-herbacea_F_contig113.1002.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig113.1002.1 vs. uniprot
Match: D8LH17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH17_ECTSI) HSP 1 Score: 298 bits (763), Expect = 9.150e-90 Identity = 226/467 (48.39%), Postives = 301/467 (64.45%), Query Frame = 1
Query: 1 LKAELARTTSQLNIQTKRAIVLEGAKKRAETESIRRSRGLQELMERNRSRYEKATAELKEEVKELGLLESAAAGFEEVKIKLGMAQNKSSDLEREVLNLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAQLQAVRERSTRLEKDSKRASELQVQLEEASEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEMAEWSGRKLTRENEGLQGLISRNRKRFQRELGKLTEASADLADKTVALQELETVLDRERESAKQLGGQVNDLKERAAALASELNVTRDKLAKETERRMRAETAVRQA-----TDKSYVEKLQLADVSLKQAQREGEEAVAEVRAVLAKEKAGWNEERTSLTTRLEEALRSSKEFSTRMADLEGVAEQLRRESEQANEQAAVLREKLQLVTASAQEATEEQERLRGELDQTADALEDRTRLQQSVASLKAALEKATGGAKDKT 1386
L+ ELA S+L +QT +A+ LE K+RAE +++R R LQ+LME+NR+RYEKA EL+EEV+ L L+ AAAGFE+ KIKL XXXXXXXXX +AQL AV++R+ LEK++ R EL+ +L XXXXXXXXXX SVEMAEWS RKL +ENEGLQGLISRNR+RF +EL +LT ASADL DK+ AL++LE V DRER++ K+LG QV LK +A LA+EL++TRD+LA+ETE R++AETAV + DK Y E+L+ AD +L+ A++EG+ AVAEV+ +L KEK W E++SLTTRLEEALRS+++FS R+ LE E+LR+ES+Q+ +A LR +L L S EAT ++ERL EL++T +E+R RLQ+SV +LKAAL+K TG D++
Sbjct: 164 LQTELAVKVSELRLQTDKALSLEAQKERAEVAAVKRERSLQDLMEKNRARYEKANLELQEEVEALSQLKDAAAGFEDAKIKLXXXXXXXXXXXXXXXXXXXXXXXXXXXLAASVDKSVEEALLLVSKEAALKDVEAQLTAVKDRAKVLEKEALRVPELEEELXXXXXXXXXXXXXXXXXQAIQDKEEAQTELVKERLFDLERSVEMAEWSERKLAKENEGLQGLISRNRQRFHKELARLTVASADLEDKSNALKDLEAVYDRERQTVKELGNQVETLKAKAEELAAELSMTRDELARETEMRLKAETAVEELQLAEKADKGYEEQLKKADAALQAARQEGQAAVAEVQTLLEKEKQAWGTEKSSLTTRLEEALRSTEDFSARVVALESSTEKLRQESQQSKAEAEQLRTQLGLSAKSLSEATVDKERLVTELEKTKGVVEERNRLQKSVDNLKAALKKFTGKQDDES 630 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig113.1002.1 >prot_D-herbacea_F_contig113.1002.1 ID=prot_D-herbacea_F_contig113.1002.1|Name=mRNA_D-herbacea_F_contig113.1002.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=528bp LKAELARTTSQLNIQTKRAIVLEGAKKRAETESIRRSRGLQELMERNRSRback to top mRNA from alignment at D-herbacea_F_contig113:96876..112211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig113.1002.1 ID=mRNA_D-herbacea_F_contig113.1002.1|Name=mRNA_D-herbacea_F_contig113.1002.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=15336bp|location=Sequence derived from alignment at D-herbacea_F_contig113:96876..112211- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig113:96876..112211- >mRNA_D-herbacea_F_contig113.1002.1 ID=mRNA_D-herbacea_F_contig113.1002.1|Name=mRNA_D-herbacea_F_contig113.1002.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3168bp|location=Sequence derived from alignment at D-herbacea_F_contig113:96876..112211- (Desmarestia herbacea DmunF female)back to top |