prot_D-herbacea_F_contig113.1002.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig113.1002.1
Unique Nameprot_D-herbacea_F_contig113.1002.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length528
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig113.1002.1 vs. uniprot
Match: D8LH17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH17_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 9.150e-90
Identity = 226/467 (48.39%), Postives = 301/467 (64.45%), Query Frame = 0 
Query:    1 LKAELARTTSQLNIQTKRAIVLEGAKKRAETESIRRSRGLQELMERNRSRYEKATAELKEEVKELGLLESAAAGFEEVKIKLGMAQNKSSDLEREVLNLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAQLQAVRERSTRLEKDSKRASELQVQLEEASEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEMAEWSGRKLTRENEGLQGLISRNRKRFQRELGKLTEASADLADKTVALQELETVLDRERESAKQLGGQVNDLKERAAALASELNVTRDKLAKETERRMRAETAVRQA-----TDKSYVEKLQLADVSLKQAQREGEEAVAEVRAVLAKEKAGWNEERTSLTTRLEEALRSSKEFSTRMADLEGVAEQLRRESEQANEQAAVLREKLQLVTASAQEATEEQERLRGELDQTADALEDRTRLQQSVASLKAALEKATGGAKDKT 462
            L+ ELA   S+L +QT +A+ LE  K+RAE  +++R R LQ+LME+NR+RYEKA  EL+EEV+ L  L+ AAAGFE+ KIKL                  XXXXXXXXX                         +AQL AV++R+  LEK++ R  EL+ +L       XXXXXXXXXX                       SVEMAEWS RKL +ENEGLQGLISRNR+RF +EL +LT ASADL DK+ AL++LE V DRER++ K+LG QV  LK +A  LA+EL++TRD+LA+ETE R++AETAV +       DK Y E+L+ AD +L+ A++EG+ AVAEV+ +L KEK  W  E++SLTTRLEEALRS+++FS R+  LE   E+LR+ES+Q+  +A  LR +L L   S  EAT ++ERL  EL++T   +E+R RLQ+SV +LKAAL+K TG   D++
Sbjct:  164 LQTELAVKVSELRLQTDKALSLEAQKERAEVAAVKRERSLQDLMEKNRARYEKANLELQEEVEALSQLKDAAAGFEDAKIKLXXXXXXXXXXXXXXXXXXXXXXXXXXXLAASVDKSVEEALLLVSKEAALKDVEAQLTAVKDRAKVLEKEALRVPELEEELXXXXXXXXXXXXXXXXXQAIQDKEEAQTELVKERLFDLERSVEMAEWSERKLAKENEGLQGLISRNRQRFHKELARLTVASADLEDKSNALKDLEAVYDRERQTVKELGNQVETLKAKAEELAAELSMTRDELARETEMRLKAETAVEELQLAEKADKGYEEQLKKADAALQAARQEGQAAVAEVQTLLEKEKQAWGTEKSSLTTRLEEALRSTEDFSARVVALESSTEKLRQESQQSKAEAEQLRTQLGLSAKSLSEATVDKERLVTELEKTKGVVEERNRLQKSVDNLKAALKKFTGKQDDES 630
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig113.1002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH17_ECTSI9.150e-9048.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..71
NoneNo IPR availableCOILSCoilCoilcoord: 75..116
NoneNo IPR availableCOILSCoilCoilcoord: 371..437
NoneNo IPR availableCOILSCoilCoilcoord: 124..196
NoneNo IPR availableCOILSCoilCoilcoord: 328..348
NoneNo IPR availableCOILSCoilCoilcoord: 253..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig113contigD-herbacea_F_contig113:96877..112211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig113.1002.1mRNA_D-herbacea_F_contig113.1002.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig113 96876..112211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig113.1002.1 ID=prot_D-herbacea_F_contig113.1002.1|Name=mRNA_D-herbacea_F_contig113.1002.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=528bp
LKAELARTTSQLNIQTKRAIVLEGAKKRAETESIRRSRGLQELMERNRSR
YEKATAELKEEVKELGLLESAAAGFEEVKIKLGMAQNKSSDLEREVLNLN
KKVENLDQKLALGEQRSAQEKALLAKKEAALREADAQLQAVRERSTRLEK
DSKRASELQVQLEEASEEGERERQRADDLQAERDQAESKSDLVKDRLFDL
ERSVEMAEWSGRKLTRENEGLQGLISRNRKRFQRELGKLTEASADLADKT
VALQELETVLDRERESAKQLGGQVNDLKERAAALASELNVTRDKLAKETE
RRMRAETAVRQATDKSYVEKLQLADVSLKQAQREGEEAVAEVRAVLAKEK
AGWNEERTSLTTRLEEALRSSKEFSTRMADLEGVAEQLRRESEQANEQAA
VLREKLQLVTASAQEATEEQERLRGELDQTADALEDRTRLQQSVASLKAA
LEKATGGAKDKTPDARAAPAVPASPQQSGGSSSSSNAASEKSSNPGDATP
ATPGASGKIEATTMPAARDARGAKVVDE
back to top