prot_D-herbacea_F_contig106.644.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig106.644.1
Unique Nameprot_D-herbacea_F_contig106.644.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length89
Homology
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BLAST of mRNA_D-herbacea_F_contig106.644.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 9.070e-10
Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 0 
Query:    2 ASGRSRRPPQSKLKVRFKNRTLIRARSIILPLPAASRPRPLLSGPAAVAIARRSSFGVRRSAPGTGFVATGAPTNFVRSGKYGMAIRR 89
            A+GRSR+ P+SK  VRFKNRTLIRARS+   LP         +     A+ARR+SFG      G G  A  + TNFVR GK+GMAIRR
Sbjct:  550 AAGRSRKAPRSK-HVRFKNRTLIRARSL---LPQQRGAAMTTAATILGAVARRASFGATSRFAGLGGTAASS-TNFVRGGKHGMAIRR 632
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BLAST of mRNA_D-herbacea_F_contig106.644.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 9.780e-8
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 0 
Query:    2 ASGRSRRPPQSKLKVRFKNRTLIRARSIILPLPAASRPRPLLSGPAAVAIARRSSFGVRRSAPGTGFVATGAPTNFVRSGKYGMAIRR 89
            A+GRSR+ P+SK  VRFKNRTLIRARS+   LP         +     A+ARR+SFG        G  A  + T FVR GK+GMAIRR
Sbjct:  521 AAGRSRQAPRSK-HVRFKNRTLIRARSL---LPQQRGAAMTTAATILGAVARRASFGATSRFAKLGGTAASS-TKFVRGGKHGMAIRR 603
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC32_9PHAE9.070e-1052.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB82_ECTSI9.780e-850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig106contigD-herbacea_F_contig106:907323..907589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig106.644.1mRNA_D-herbacea_F_contig106.644.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig106 907292..907589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig106.644.1 ID=prot_D-herbacea_F_contig106.644.1|Name=mRNA_D-herbacea_F_contig106.644.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=89bp
MASGRSRRPPQSKLKVRFKNRTLIRARSIILPLPAASRPRPLLSGPAAVA
IARRSSFGVRRSAPGTGFVATGAPTNFVRSGKYGMAIRR
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