prot_D-herbacea_F_contig1184.1310.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1184.1310.1
Unique Nameprot_D-herbacea_F_contig1184.1310.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length224
Homology
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: A0A6H5JUB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB2_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.570e-21
Identity = 62/186 (33.33%), Postives = 97/186 (52.15%), Query Frame = 0
Query:   35 CIFEGNAATNGGGLHSTAENEMIYHSSXXXXXXXXXXXAIYHMGF-VTLQNVSFVDNRASDDGMAVTSIGELDETSNATFTGNTFYCPTDEYSVETNGNSDANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGG 219
            C+FE N+A +GG   ST  +                  A  H G  V+L + +FV NRA   G+AV+S+G ++  ++ TF  NT+YC + +Y +  + +  + + RF  VCT C+     IP  + +  ++   +P CET+  G     N GAT+  L+L+  YYRTS  S  +L+C Q   C+GG
Sbjct:  217 CVFERNSAEDGGKEPSTRSS-------------VGSGGAYLHSGLLVSLADTTFVGNRAGAAGLAVSSLGIIENLTDTTFESNTYYCQSGQYDIGADEDEVSGTYRFDEVCTCCAVSNAEIPESMVVANNAF--VPICETIMKGASG--NAGATVAALELDPDYYRTSADSREVLQCHQEEACMGG 385          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 3.760e-15
Identity = 55/191 (28.80%), Postives = 95/191 (49.74%), Query Frame = 0
Query:   32 FVGCIFEGNAATNGGGLHSTAENEMIYHSSXXXXXXXXXXXAIYHMGFVTLQNVSFVDNRASD-DGMAVTSIGELDETSNATFTGNTFYCPTDEYSVETNGNSDANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPN--GGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGG 219
            F  C F GN A+  GG   +A  +  +  +           A+   G  +++N SFVDN + D +G A+++IG + + ++  F+ N F CP+  + ++ N + D     F+ VC  C   CD   +   L+G      PAC  +   + H  +  G  T++ + +++GY+R + +S  +LEC Q   CLGG
Sbjct:  623 FDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTF-LDLNASGDP----FEAVCAGCDIVCDGCVFEQGLVG------PACSEV---MAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGG 799          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.470e-13
Identity = 66/220 (30.00%), Postives = 93/220 (42.27%), Query Frame = 0
Query:    8 SNEALTGGGVSILDGGSFT-------ENEMFFVGCIFEGNAATNGGGLHSTAENEMIYHSSXXXXXXXXXXXAIYHMGFVTLQNVSFVDNRASDDG-MAVTSIGELDETSNATFTGNTFYCPTDEYSVETNGNSDANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGG 219
            SN A  GG V+    G           N   F  C F GN AT  GG   TA     +  +           A+   G  ++ N SFV+N ++D G  AV++IG +       F+GN F CPT  + +  N + D     F+ VC  C T      +   LL      +P C  L      P +G  T+E L +++GY+R +  S  +L C     CLGG
Sbjct:  785 SNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMF-LAYNESDDL----FETVCDGCQTXXXXXAFAEPLL------VPMCRDLLEHSTSP-DGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGG 992          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 2.270e-13
Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 0
Query:   35 CIFEGNAATNGGGLHSTAENEMIYHSSXXXXXXXXXXXAIYHMGF-VTLQNVSFVDNRASDDGMAVTSIGELDETSNATFTGNTFYCPTDEYSVETNGNSD--ANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETL 174
            C+FE N+A +GG ++S A  ++I  S            A  H G  V+L + +FV NRA   G+AV S+          F  NT+YC + +Y  + + + D  + +CRF  VCT C+  C  IP  + +  D+   +P CET+
Sbjct:  412 CVFERNSAEDGGAIYSAAGYDIISDSWFEDNIAVGSRGAYLHSGLLVSLADTTFVGNRAGAAGLAVASLXXXXXXXXXXFESNTYYCQSGQYGYDISADEDEVSGTCRFDEVCTGCAVSCAEIPESVVVANDAF--VPMCETV 552          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 2.730e-13
Identity = 59/206 (28.64%), Postives = 93/206 (45.15%), Query Frame = 0
Query:   17 VSILDGGSFTENEM--FFVGCIFEGNAATNGGGLHSTAENEMIYHSSXXXXXXXXXXXAIYHMGFVTLQNVSFVDNRASD-DGMAVTSIGELDETSNATFTGNTFYCPTDEYSVETNGNSDANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGG 219
            +SI   G+    ++   F  C F GN A + GG  ++A  E    +S           A+   G   + N SF +N + + +G AV++IG +   +NA+F GN F CP   +   T G+ D     F+ +C  C T CD   +    L       P C  +         G  T++TL +++G++R S  S+ +L C     CLGG
Sbjct:  889 ISIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVT-GSVD----HFEAICNGCETTCDGCVFAEGSLA------PICTEVMDHSTSD-GGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGG 1082          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: A0A6H5JMC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC1_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 6.210e-11
Identity = 62/208 (29.81%), Postives = 93/208 (44.71%), Query Frame = 0
Query:   13 TGGGVSILDGGSFTENEMFFVGCIFEGNAAT-NGGGLHSTAENEMIYHSSXXXXXXXXXXXAIYHMGFVTLQNVSFVDNRASDDGMAVTSIGELDETSNATFTGNTFYCPTDEYSVETNGNSDANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGG 219
            TG G +IL  G   E  + + GC F GN AT +GG + S A  +++ +S+        XXX                       G A+ ++G +D     TF  N   CP+  +    +G+  +N C     C EC+  CD        + D+S  +P C   P    H  + G+T+ETL +++GY+R +  S NIL C     CLGG
Sbjct:  545 TGSGTTILATGE--EFPVTYTGCNFTGNWATASGGAMESAAGKDLVVNSTFLGNTASQXXXXXXXXXXXXXXXXXXXXXADEQGGPAIHNLGFMDGIEACTFADNDVVCPSGFFLDFVDGDRYSNVCSG---CEECND-CD--------VADNSE-VPTCTITPD---HAQSTGSTVETLSIDRGYWRATPSSRNILACHNADACLGG 734          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.330e-9
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 0
Query:  116 NTFYCPTDEYSVETNGNSD----ANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGGT 220
            N FYC   E+  ET  + D    A+ CRF  VC+ C++ CD+     + L D+   +P CE  P G       GAT+ TL++  G+YR+S+ S++I EC  +  C GG+
Sbjct:  514 NDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAET-LPTCEEAPEGS-RTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGS 620          
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 6.070e-9
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
Query:  116 NTFYCPTDEYSVETNGNSD----ANSCRFQLVCTECSTGCDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRTSKMSSNILECQQRGVCLGGT 220
            N FYC   E+  ET  + D    A+ CRF+ VC+ C++ C +     + L D+   +P CET P G       GAT+ TL++  G+YR+S+ S++I EC  +  C GG+
Sbjct:  490 NDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADT-LPTCETAPEGS-RTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGS 596          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1184.1310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JUB2_9PHAE3.570e-2133.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTL7_ECTSI3.760e-1528.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LIY0_ECTSI1.470e-1330.00Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FPF6_ECTSI2.270e-1332.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE2.730e-1328.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMC1_9PHAE6.210e-1129.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI3.330e-936.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE6.070e-936.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 61..75
e-value: 4.1E-4
score: 18.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 12..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1184contigD-herbacea_F_contig1184:30598..31949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1184.1310.1mRNA_D-herbacea_F_contig1184.1310.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1184 30598..31952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1184.1310.1 ID=prot_D-herbacea_F_contig1184.1310.1|Name=mRNA_D-herbacea_F_contig1184.1310.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=224bp
MREATLSSNEALTGGGVSILDGGSFTENEMFFVGCIFEGNAATNGGGLHS
TAENEMIYHSSFTDNYAETSGGAIYHMGFVTLQNVSFVDNRASDDGMAVT
SIGELDETSNATFTGNTFYCPTDEYSVETNGNSDANSCRFQLVCTECSTG
CDNIPYGLSLLGDSSGGIPACETLPSGVVHPPNGGATIETLKLEKGYYRT
SKMSSNILECQQRGVCLGGTNPER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR003368POMP_repeat