prot_D-herbacea_F_contig1161.1205.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1161.1205.1
Unique Nameprot_D-herbacea_F_contig1161.1205.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length506
Homology
BLAST of mRNA_D-herbacea_F_contig1161.1205.1 vs. uniprot
Match: A0A6H5KCA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA4_9PHAE)

HSP 1 Score: 452 bits (1163), Expect = 3.090e-152
Identity = 275/513 (53.61%), Postives = 322/513 (62.77%), Query Frame = 0
Query:    7 TATLNSWLILLLCSRLDAFVPGPRTAVGGGLRLAP------ASRLRVSRQERRACLGLRSTRNDDNTNXXXXXXXXXSAASNQSPREQ------PSSVI-FRVLRGGTPGARRGSSTSTATTEHRRLDNNHPDPELVEVSLDR---GGKGDIFPQDLEDFLFLARSSQPGSIGDELQRRGVRVFPKEAFSDGXXXXXXXNHMLYSWKGGGKPLPRGASMCDLPRDGQGRVRLVLWDPCGPDHPLIWAVGGEPTAEASVEVLNFPASRPDESLLEGGSSSXXXXXXXXXXXXXXXXXXXXXSRAGEFDDLRSAVVFRNWFNVDQQQAIADALAGQILSPDEDDEDNVIATDRTHFPLVDDRAALAAVGDGMLGALSTDRFSGSVSGRTPPVPVRANREFTAVCYGNEAKMDRHTDTWKEWTLIVSVGHTIPFELGSSDGAPDVSLELASGEGLLFNGHELYHAVRQVKNGTAPSFWKTHRLNTEGGFARVGLLSMKSFSSKGVVAPRWGPLDGS 503
            TA   S L++LLC   DAFVP  R  +G  L  AP         L ++R+ R +    RS+      N XXXXXXXX                 P+SV+ FRVLRGG P     ++T              P+ +LVEVSLDR   GG     PQDL +FLFL RSSQPGSIG++LQRRGVRVFP+EAF+D              W GG +PLP    M +LPRDG+GRVRLVLWDPCGPDHPL+ AV  EP+ +ASVEVLNF     D    +GG  +                         +FD+ RSAVVFR WF V+QQQ IAD+LA QI + D DDE   +  DR HFPL+ DRA LAAVGD ML ALS+DRFSG V GR PPVP RANREF AVCYG +AKM  H DTWKEWTLIVS+G+TIPF+LG S G PD+ LELASGEGLLFNG+EL+H V  VK GTAP+FW+TH L+ +GGFARVG LSMKSF+SKGV AP WG   GS
Sbjct:    6 TAIFTSSLVVLLCPGPDAFVPSAR--IGPPLSAAPPRPRHRVEGLPLTRRTRPSLPCTRSSAQQQADNRXXXXXXXXXXXXXXXXXXXXXTANGPASVVRFRVLRGGNPRDNAAAAT--------------PEADLVEVSLDRPDSGGGMANNPQDLREFLFLVRSSQPGSIGEDLQRRGVRVFPEEAFADAEAEV--------GWAGG-RPLPLDTPMTELPRDGEGRVRLVLWDPCGPDHPLVRAVSVEPSKDASVEVLNFLLPG-DRRRHDGGEGTAGDGGGCSSGYGR------------DFDESRSAVVFRKWFTVEQQQVIADSLASQIFAED-DDEGPGLDVDREHFPLLRDRAGLAAVGDSMLSALSSDRFSGEVGGRDPPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLIVSIGNTIPFDLGMSKGRPDIRLELASGEGLLFNGYELFHEVHGVKPGTAPAFWETHALSAKGGFARVGFLSMKSFNSKGVSAPTWGVEKGS 479          
BLAST of mRNA_D-herbacea_F_contig1161.1205.1 vs. uniprot
Match: D7FS11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS11_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 5.170e-146
Identity = 249/433 (57.51%), Postives = 290/433 (66.97%), Query Frame = 0
Query:   89 PSSVI-FRVLRGGTPGARRGSSTSTATTEHRRLDNNHPDPELVEVSLDR---GGKGDIFPQDLEDFLFLARSSQPGSIGDELQRRGVRVFPKEAFSD-------GXXXXXXXNHMLYSWKG-------GGKPLPRGASMCDLPRDGQGRVRLVLWDPCGPDHPLIWAVGGEPTAEASVEVLNFPASRPDESLLEGGSSSXXXXXXXXXXXXXXXXXXXXXSRAGEFDDLRSAVVFRNWFNVDQQQAIADALAGQILSPDEDDEDNVIATDRTHFPLVDDRAALAAVGDGMLGALSTDRFSGSVSGRTPPVPVRANREFTAVCYGNEAKMDRHTDTWKEWTLIVSVGHTIPFELGSSDGAPDVSLELASGEGLLFNGHELYHAVRQVKNGTAPSFWKTHRLNTEGGFARVGLLSMKSFSSKGVVAPRWGPLDGS 503
            P+SV+ FRVLRGG P     +    AT          P+ +LVEVSLDR   GG     PQDL +FLFL RSSQPGSIG++LQRRGVRVFP+EAF+D       GXXXXXXX       +G       GG+PLP    M +LPRDG+GRVRLVLWDPCGP HPL+ AV  EP+ +ASV VLNF    P++S    G                            +F++ RSAVVFR WF V+QQQ IAD+LA Q+ + D DDE   +  DR HFPL+ DRAALAAVGD ML ALS+DRFSG V GR PPVP RANREF AVCYG +AKM  H DTWKEWTLIVS+G+TIPF+LG S G PD+ LELASGEGLLFNG+EL+H V  VK GTAP+FW+ H LN +GGFARVG LSMKSF+SKGV AP WG   G+
Sbjct:   80 PASVVRFRVLRGGNPRDNAAAXXXAAT----------PEADLVEVSLDRPDSGGGMANNPQDLREFLFLVRSSQPGSIGEDLQRRGVRVFPEEAFADAEAELGAGXXXXXXXXXXXXGEEGLSGVGWTGGRPLPLDTPMTELPRDGEGRVRLVLWDPCGPTHPLVRAVSVEPSKDASVMVLNFLL--PEDSRRHDGGEGTAGEGGGCSSGY-----------GSDFNESRSAVVFRKWFTVEQQQVIADSLASQMFAED-DDEGPGLDVDREHFPLLRDRAALAAVGDSMLSALSSDRFSGEVGGRDPPVPTRANREFNAVCYGAQAKMQEHRDTWKEWTLIVSIGNTIPFDLGVSQGRPDIRLELASGEGLLFNGYELFHEVHGVKPGTAPAFWENHALNAKGGFARVGFLSMKSFNSKGVSAPTWGVEKGT 488          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1161.1205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA4_9PHAE3.090e-15253.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS11_ECTSI5.170e-14657.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037151Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyGENE3D2.60.120.590coord: 376..473
e-value: 2.2E-5
score: 26.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..505
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.827

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1161contigD-herbacea_F_contig1161:52925..67726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1161.1205.1mRNA_D-herbacea_F_contig1161.1205.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1161 52586..67777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1161.1205.1 ID=prot_D-herbacea_F_contig1161.1205.1|Name=mRNA_D-herbacea_F_contig1161.1205.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=506bp
MTRWNNTATLNSWLILLLCSRLDAFVPGPRTAVGGGLRLAPASRLRVSRQ
ERRACLGLRSTRNDDNTNTNNTNTSTNSAASNQSPREQPSSVIFRVLRGG
TPGARRGSSTSTATTEHRRLDNNHPDPELVEVSLDRGGKGDIFPQDLEDF
LFLARSSQPGSIGDELQRRGVRVFPKEAFSDGDGDGDGDNHMLYSWKGGG
KPLPRGASMCDLPRDGQGRVRLVLWDPCGPDHPLIWAVGGEPTAEASVEV
LNFPASRPDESLLEGGSSSSSSSSSSSGSGSGSSSGSSSSSRAGEFDDLR
SAVVFRNWFNVDQQQAIADALAGQILSPDEDDEDNVIATDRTHFPLVDDR
AALAAVGDGMLGALSTDRFSGSVSGRTPPVPVRANREFTAVCYGNEAKMD
RHTDTWKEWTLIVSVGHTIPFELGSSDGAPDVSLELASGEGLLFNGHELY
HAVRQVKNGTAPSFWKTHRLNTEGGFARVGLLSMKSFSSKGVVAPRWGPL
DGSDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037151AlkB-like_sf