prot_D-herbacea_F_contig116.1186.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig116.1186.1
Unique Nameprot_D-herbacea_F_contig116.1186.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length68
Homology
BLAST of mRNA_D-herbacea_F_contig116.1186.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 6.280e-18
Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MSRAEMKATPENTTLLCIEKPEAEIYGIDWRGDRKPYSIYESWNDTYEQLLEMVVFDGMAGFKRC 65
            M R  +KAT +NTTLL +EKP+AE+YG  W G+   YS+Y++W+DT EQLLEM  F G+ G ++C
Sbjct:  382 MRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKC 446          
BLAST of mRNA_D-herbacea_F_contig116.1186.1 vs. uniprot
Match: D7FHC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC1_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.690e-11
Identity = 23/54 (42.59%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   12 NTTLLCIEKPEAEIYGIDWRGDRKPYSIYESWNDTYEQLLEMVVFDGMAGFKRC 65
            N +++C+++PE ++YGIDWR  +  Y++Y+SW D    ++EMVV D + G +RC
Sbjct:  506 NASMICLQRPEVQVYGIDWRTTKDAYTVYDSW-DPNSNMMEMVVSDAVKGVQRC 558          
BLAST of mRNA_D-herbacea_F_contig116.1186.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.240e-11
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   12 NTTLLCIEKPEAEIYGIDWRGDRKPYSIYESWNDTYEQLLEMVVFDGMAGFKRC 65
            N T++C+++ E E+YGI+WR   + Y++Y+SW D    LLEMVV D + G +RC
Sbjct:  373 NATMICLQRSEVEVYGIEWRTTSEAYTVYDSW-DPSSNLLEMVVSDSVKGMQRC 425          
BLAST of mRNA_D-herbacea_F_contig116.1186.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 6.010e-9
Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   12 NTTLLCIEKPEAEIYGIDWRGDRKPYSIYESWNDTYEQLLEMVVFDGMAGFKRC 65
            + +++C+++PE E+YGI+WR     Y++Y  W+ +  QL EM+V D + G + C
Sbjct:  301 SASMICLQRPEVEVYGIEWRTTSNAYTVYNKWDPSVNQL-EMIVSDDLKGVQHC 353          
BLAST of mRNA_D-herbacea_F_contig116.1186.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 5.590e-5
Identity = 21/58 (36.21%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    8 ATPENTTLLCIEKPEAEIYGIDWRGDRKPYSIYESWNDTYEQLLEMVVFDGMAGFKRC 65
            A  E    L  E+P  +++G+    D+  Y++Y+ WN+T +QL EM+ FD + GF++C
Sbjct:  484 ACNEKLKTLSTERPGTQVFGMASWNDQ--YTVYQRWNNTADQLTEMMTFD-VGGFEQC 538          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig116.1186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FRV9_ECTSI6.280e-1853.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHC1_ECTSI1.690e-1142.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7B0_9PHAE2.240e-1146.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ7_ECTSI6.010e-937.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7B3_9PHAE5.590e-536.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig116contigD-herbacea_F_contig116:528091..529425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig116.1186.1mRNA_D-herbacea_F_contig116.1186.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig116 528005..529436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig116.1186.1 ID=prot_D-herbacea_F_contig116.1186.1|Name=mRNA_D-herbacea_F_contig116.1186.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=68bp
MSRAEMKATPENTTLLCIEKPEAEIYGIDWRGDRKPYSIYESWNDTYEQL
LEMVVFDGMAGFKRCHL*
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