prot_D-herbacea_F_contig104.459.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig104.459.1
Unique Nameprot_D-herbacea_F_contig104.459.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length193
Homology
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BLAST of mRNA_D-herbacea_F_contig104.459.1 vs. uniprot
Match: A0A6H5JIC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC2_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.600e-21
Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 0 
Query:    6 SLKQTVDATRVALRSRLHYWARDVAVFIERGGSLESAVNVIPVNMSMARETPGPGEWNAWAGRSLDTWSGLMPLTIK 82
            S  + + +TR ALRSRLH+WAR++ +F+E+GG +E+ V  IPVNM++ R T GPGE +AWAG+SLD W GL PLT++
Sbjct:  586 SQAEILSSTREALRSRLHFWAREIPIFVEQGGDIEAGVGEIPVNMTVIRATIGPGESSAWAGKSLDNWKGLEPLTVE 662
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BLAST of mRNA_D-herbacea_F_contig104.459.1 vs. uniprot
Match: D7G174_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G174_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 4.030e-21
Identity = 42/77 (54.55%), Postives = 60/77 (77.92%), Query Frame = 0 
Query:    6 SLKQTVDATRVALRSRLHYWARDVAVFIERGGSLESAVNVIPVNMSMARETPGPGEWNAWAGRSLDTWSGLMPLTIK 82
            S  + + +TR A+RSRLH+WAR++ +F+E+GG +E+ V  IPVNM++ R T GPGE +AWAG+SLD W GL PLT++
Sbjct:  553 SQAEILGSTREAMRSRLHFWAREIPIFVEQGGEIEAGVGEIPVNMTVIRATIGPGESSAWAGKSLDNWKGLEPLTVE 629
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIC2_9PHAE1.600e-2155.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G174_ECTSI4.030e-2154.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig104contigD-herbacea_F_contig104:243632..246010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig104.459.1mRNA_D-herbacea_F_contig104.459.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig104 243632..246011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig104.459.1 ID=prot_D-herbacea_F_contig104.459.1|Name=mRNA_D-herbacea_F_contig104.459.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=193bp
FLHTRSLKQTVDATRVALRSRLHYWARDVAVFIERGGSLESAVNVIPVNM
SMARETPGPGEWNAWAGRSLDTWSGLMPLTIKDRPVTPGEEGIAASEVAA
KDGGGSSGTGKNERELCDMNIDLDSEADKILDKGSSQQTQQEQEQRLKAS
ASKSNSPAGRKVPKAVPSAKKAARADGTAAASGEEATGGGGER
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