prot_D-herbacea_F_contig1028.375.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1028.375.1
Unique Nameprot_D-herbacea_F_contig1028.375.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length101
Homology
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: A0A343C631_FUCDI (ATP synthase subunit a n=3 Tax=Fucus TaxID=3011 RepID=A0A343C631_FUCDI)

HSP 1 Score: 144 bits (363), Expect = 5.120e-41
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI
Sbjct:   30 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: A0A0U1WNN5_SARFS (ATP synthase subunit a n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN5_SARFS)

HSP 1 Score: 115 bits (289), Expect = 6.750e-30
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            MITT   LGF LFV+YCLSV+  SCFP+RWQLL+E LYLTTAGLIWDSIG  GQKYFPFIFMIFSFILI
Sbjct:   30 MITTVFSLGFILFVYYCLSVFGLSCFPSRWQLLLERLYLTTAGLIWDSIGLHGQKYFPFIFMIFSFILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: D2YYC2_SCYLO (F-ATPase protein 6 (Fragment) n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=D2YYC2_SCYLO)

HSP 1 Score: 110 bits (275), Expect = 2.750e-29
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            M+TT +GL FFLF+ YCL  Y  +CFP RWQL++E LY++TAGLIWDS+GP GQKYFPF+F+IFSFILI
Sbjct:   30 MLTTCIGLAFFLFIFYCLLSYKLNCFPTRWQLVLESLYISTAGLIWDSVGPKGQKYFPFLFVIFSFILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: A0A089MYN0_PETFA (ATP synthase subunit a n=18 Tax=Ectocarpales TaxID=2877 RepID=A0A089MYN0_PETFA)

HSP 1 Score: 110 bits (276), Expect = 5.930e-28
Identity = 50/69 (72.46%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            MITT +GL FFLF  YCL  Y+ +CFP RWQL++E LY++TAGLIWDSIGP GQKYFPF+F+IFSFILI
Sbjct:   30 MITTCIGLAFFLFTFYCLLSYNLNCFPTRWQLILESLYVSTAGLIWDSIGPKGQKYFPFLFVIFSFILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: E6ZES4_ECTSI (ATP synthase subunit a n=65 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES4_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 4.660e-27
Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            MITT + L FF+F+ YCLS Y  +CFP RWQL++E LY++TAGLIWDS+GP GQKYFPF+F++FSFILI
Sbjct:   30 MITTCVSLTFFIFLFYCLSFYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVVFSFILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: A0A1I9LW45_9PHAE (ATP synthase subunit a n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW45_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.660e-27
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            MI+TF+ L FF+F+ YCLS+Y  SCFP RWQL++EGLY TTAGLIWDS+G  GQKYFPF+F+IFS ILI
Sbjct:   30 MISTFISLFFFIFLFYCLSLYGLSCFPTRWQLILEGLYTTTAGLIWDSVGLQGQKYFPFLFVIFSSILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: A0A8F0FD27_9PHAE (ATP synthase subunit a n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FD27_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 6.580e-27
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    2 ITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            I T L LG F  + YCLS Y F+CFP+RWQL++E  YLTTAGLIWDS+GP GQKYFPFIF IFSF+LI
Sbjct:   31 IATSLALGLFFLIDYCLSAYGFNCFPSRWQLVLESFYLTTAGLIWDSVGPQGQKYFPFIFAIFSFVLI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: ATP6_PYLLI (ATP synthase subunit a n=2 Tax=Pylaiella littoralis TaxID=2885 RepID=ATP6_PYLLI)

HSP 1 Score: 95.5 bits (236), Expect = 5.200e-22
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            M+TT + L FFLF+ YCL  Y  + FP RWQL++EGLY +TAGL+WDS+GP   K FPF+F+IFSFILI
Sbjct:   30 MLTTCVSLSFFLFLFYCLFSYGLNSFPTRWQLVLEGLYTSTAGLVWDSVGPRRPKVFPFLFVIFSFILI 98          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: Q2TUB2_DICDH (ATP synthase subunit a n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUB2_DICDH)

HSP 1 Score: 80.1 bits (196), Expect = 4.190e-16
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            ++T+F+ LG     +  L ++  +  P RWQL+ EGLY   AGLIWDS+GP GQKYFPFIF IF F+L+
Sbjct:   31 VLTSFVSLGAIWSFYSMLVIFDLTIVPTRWQLIFEGLYEVAAGLIWDSVGPRGQKYFPFIFTIFFFVLV 99          
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Match: A0A4Y5T8Z6_9PHAE (ATP synthase subunit a n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Z6_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.610e-15
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILI 69
            ++T+ + LG    +++ LSV+  +  P RWQL++E LY T AGLIWDS+G  GQKYFPFIF IF F+L+
Sbjct:   31 VLTSLISLGSAWCLYFLLSVFGLTIVPVRWQLILESLYETAAGLIWDSVGARGQKYFPFIFSIFLFVLL 99          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1028.375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A343C631_FUCDI5.120e-41100.00ATP synthase subunit a n=3 Tax=Fucus TaxID=3011 Re... [more]
A0A0U1WNN5_SARFS6.750e-3081.16ATP synthase subunit a n=24 Tax=Sargassaceae TaxID... [more]
D2YYC2_SCYLO2.750e-2969.57F-ATPase protein 6 (Fragment) n=1 Tax=Scytosiphon ... [more]
A0A089MYN0_PETFA5.930e-2872.46ATP synthase subunit a n=18 Tax=Ectocarpales TaxID... [more]
E6ZES4_ECTSI4.660e-2768.12ATP synthase subunit a n=65 Tax=Phaeophyceae TaxID... [more]
A0A1I9LW45_9PHAE4.660e-2771.01ATP synthase subunit a n=1 Tax=Pleurocladia lacust... [more]
A0A8F0FD27_9PHAE6.580e-2770.59ATP synthase subunit a n=1 Tax=Analipus japonicus ... [more]
ATP6_PYLLI5.200e-2262.32ATP synthase subunit a n=2 Tax=Pylaiella littorali... [more]
Q2TUB2_DICDH4.190e-1652.17ATP synthase subunit a n=1 Tax=Dictyota dichotoma ... [more]
A0A4Y5T8Z6_9PHAE1.610e-1552.17ATP synthase subunit a n=1 Tax=Dictyopteris divari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..28
NoneNo IPR availableTMHMMTMhelixcoord: 32..49
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 59..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1028contigD-herbacea_F_contig1028:74079..74381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1028.375.1mRNA_D-herbacea_F_contig1028.375.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1028 73838..74465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1028.375.1 ID=prot_D-herbacea_F_contig1028.375.1|Name=mRNA_D-herbacea_F_contig1028.375.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=101bp
MITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIG
PAGQKYFPFIFMIFSFILIWISYAKFVSSGWDFLSFSIFIGTYRNSFVHI
*
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