prot_D-herbacea_F_contig100.242.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.242.1
Unique Nameprot_D-herbacea_F_contig100.242.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length783
Homology
BLAST of mRNA_D-herbacea_F_contig100.242.1 vs. uniprot
Match: A0A6H5KHS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS3_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 3.330e-77
Identity = 298/875 (34.06%), Postives = 387/875 (44.23%), Query Frame = 0
Query:    1 MHTAAGTGAIESMELLISAGLSPRSRDDGGCTPLHYAA---AHGSAECVSFLCAFARNTTRAGDRRIGDXXXXXXXXXXXXXXXXXXXXXX-GT-ELVHEVNAKGETPLDVARALCGGGVCDTACLRALEDGATIRRTTIGPRARGGVHSGLESGV-----DLQRIMAVWERFFENAAKRACVEQDLATLSVEEYDNDEPRHSGSPPEIQAI-IEGLGGQGNV--YVDDD-----GQAGPAGRTEGEG------------GVVETASEGDCDGVWGTRGNDYGRYED--CVERFEAFHLPD--TSGVAPMRVRAWEEEVEPLSDHGRDSSQGADHSIHAPTTTTQVGKPTFFKGVVRNET-----SSTDDGPSLNQTPRSGTERWA-----RSSYTVKAEIETYSEQYEEVSTAASASLDQ------AWVACWDAASEAVYYWNSAGGELNWNAPPAGSA--------AVSNRIWDSEREAFFAVDESGESHWLSAGGDVLPATSTDYDAVNGNRVRGAATAAAVDG-DGLTPQVWSS---------------PSFPQGLDIYS---------LNEDDDNGNDDVFHPAVAEEGHWFDGESTPGDSSCGIGHGDWGGSQATEAFYAATTENLVGKLHQDRDENASCT----FDAQDERKHADGNSALFSVAAGAGTRGVSFNGYIFDGSTVSDCCPPRIVEEGEETQPPLVHTGDVVEPTTVGAENTDATEIKIDDDGGVHFFDANMYDTQEQPTNNRPSNAYVDGTAGGLNRKEKQEAEMSSVGKVEADELARL-LPRWVMWCPRSPDAP-----SYFVNEETGDASWVLPPEVVVPSGGWLRAWSEEYEAYFYSNQWTAKVTWEMDDLLGVGG 782
            MHTAAG GA+ES+ELL+SAGLSPR+RD  G TPLH+A       +A CVSFLCA A +T  + DR  GD                       GT +++ E NA GETPLD+A AL G  V   A L A  DG   RR    PR+ GG  S L   V     D QRIMAVWERFFENAA+      DL             R   SP  I A+   G G  G V   V+ D     G+    GR  G G              V T+  G   G     G+  GR++   CV+  ++ +L    TS VA  R  A     + L   G D+       +       Q  K      V   E+     SS D    L  TPR G    A     R    + + +E  +   +  + AA A+ D        W+ACWDAASE+VYYW+S  GEL+WNAP   +A         + + +WD +REAFF +DE G SHWL       P++ T    V  +R       AA+DG DG T  +                   S+ QG  + +         +  D D G        V E+  W   +   G S            +  +     T  N  G+ + + D N +      FDAQ+E  HA   S   S  AGAG           DG   +D     +    E+ +    +   VV   T   +NT  T  K +   G+     ++ DT EQP++ R S+   D    G      +  + SSV  VEAD+LA + LP WV WC  SP        SYFVNEETG++SWVLPP+ V  S GWL AWSEE++A+F++NQWT  VTW   DLLG GG
Sbjct:   37 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSAAARCVSFLCAVAGSTVLSRDRTAGDTPLHFAVRARQGVCVEVLLSFAAGTNDILREANANGETPLDLAAALSGDDVILLALLEA--DG---RRRQ--PRSNGGNLSYLGRNVEGDTVDFQRIMAVWERFFENAARA-----DLG------------RKKSSPDVISAVGTVGRGEYGGVEQLVNTDETRAAGKLAKDGRWLGRGQPRATQTLDRDISFVTTSELGGGGGGESQSGDRNGRWDGGWCVDTADSRNLRSRSTSSVATARDLARGPPPQHLERDGEDAHVDVAPLLPVGPMRRQGVKDDLSVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNIDSTLEPSTPPIKATNAAAEAAADNPYRRHGTWIACWDAASESVYYWDSNSGELSWNAPGPSTAIERGNRLNGIPSPLWDPQREAFFTIDEDGASHWLVG----YPSSPTWTTPVVEHR-------AAMDGADGDTASLVQEYNPDRTTVSKESTTYTSWQQGSAVAAAAPEPSSSEVECDRDRGILGTTANQVEEDPAWDRQQPLAGFSHS---------LRMVDRQSIQTLPNTCGEKYTEDDVNGNDDLHEFFDAQEE--HAARCSTPSSSHAGAGQECAV---EPIDGDAGADNRVVHLASGPEQQRCLRANAAAVVSEYT---QNT-TTAGKGNQSDGI-----DLSDTDEQPSSGRDSHQDTDQNGLGAVEGGTRFHDESSV--VEADDLAMIRLPLWVQWCSYSPHDDDDTNLSYFVNEETGESSWVLPPDAVAESRGWLLAWSEEHQAHFFANQWTGNVTW---DLLGPGG 848          
BLAST of mRNA_D-herbacea_F_contig100.242.1 vs. uniprot
Match: D7FHX5_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX5_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.530e-74
Identity = 295/903 (32.67%), Postives = 385/903 (42.64%), Query Frame = 0
Query:    1 MHTAAGTGAIESMELLISAGLSPRSRDDGGCTPLHYAA---AHGSAECVSFLCAFARNTTRAGDRRIGDXXXXXXXXXXXXXXXXXXXXXX-GT-ELVHEVNAKGETPLDVARALCGGGVCDTACLRALEDGATIRRTTIGPRARGGVHSGL----ESG-VDLQRIMAVWERFFENAAKRACVEQDLATLSVEEYDNDEPRHSGSPPEIQAI-IEGLGGQGNV--YVDDD-----GQAGPAGRTEGEG----------------------GVVETASEGDCDGVWGTRGNDYGRYEDCVER--------FEAFHLPDTSGVAPMRVRAWEEEVEPLSDHGRDSS------------QGADHSIHAPTTTTQVGKPTFFKGVVRNETSSTDDGPSLNQTPRSGTERWA-----RSSYTVKAEIETYSEQYEEVSTAASASLDQ------AWVACWDAASEAVYYWNSAGGELNWNAPPAGSA--------AVSNRIWDSEREAFFAVDESGESHWL---------------------SAGGDVLPATSTDYDAVNGNRVRGAATAAAVDGDGLTPQVWSSPSFPQGLDI------YSLNEDDDNGNDDVFHPAV--AEEGHWFDGESTPGDSSCGIGHGDWGGSQATEAFYAATTENLVGKLHQDRDENASCT----FDAQDERKHADGNSALFSVAAGAGTRGVSFNGYIFDGSTVSDCCPPRIVE--EGEETQPPL-VHTGDVVEPTTVGAENTDATEIKIDDDGGVHFFDANMYDTQEQPTNNRPSNAYVDGTAGGLNRKEKQEAEMSSVGKVEADELARLLPRWVMWCPRSP------DAPSYFVNEETGDASWVLPPEVVVPSGGWLRAWSEEYEAYFYSNQWTAKVTWEMDDLLGVGG 782
            MHTAAG GA+ES+ELL+SAGLSPR+RD  G TPLH+A      G+A CVSFLC  A +T  + DR  GD                       GT +++ E NAKGETPLD+A AL G    D   + AL DG   R     PR+ GG  S L    E G VD QRIMAVWERFFENAA+      DL                 SP  I A+   G GG G V   V+ D     G+    GR  G G                      G V  +  GD +G W     D G   D  +         +    L DTS +A  +  A     + L   G D              QGA   +       QVG       ++    SS D    L  TPR G    A     R    + + +E  +   ++ + AA A+ D       AW+ACWDAASE++YYW+S  GEL+WNAP   +A           + +WD +REAFF +D+ G SHWL                      A GD+      DY                 D    + +  +  S+ QGL I      +S +E + + + D  +  V   +E   +DG+             D    QA +        N  G  +   D N +      FDAQ+E  HA   SA     AGAG           DG   +D    R++    GEE Q  L  +   VV  +T   +NT         DG       +++DT+EQP+  R S+   D    G      +  + S+V +     L RL P WV WC  SP      +   YFVNEETG++SWVLPP+ V  S GWLRAWSEE++A+F++NQWT  VTW   DLLG  G
Sbjct:    1 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSGAARCVSFLCVVAGSTVLSRDRTAGDTPLHFAVRARHGVCVEVLLSFAEGTSDILREANAKGETPLDLAAALSG----DDGIVLALLDGDRRRHQ---PRSNGGKLSYLGRNVEGGTVDFQRIMAVWERFFENAARA-----DLGGKK------------SSPDVISAVGTVGRGGYGGVEQLVNTDETRGVGKLAEDGRWLGRGQPRATQTFDRDRHFVTTSELGGGGVGESQTGDRNGRW-----DGGWCVDTADSRTFRSRRTWRPSGLADTSSIATAQDLARGTPPQHLERDGEDEHVDVAPLQSPHRRQGAKEDLGV-----QVGVGESGTTLL----SSDDADLHLFHTPRGGDGVEAVRLPERIHGNIDSTLEPSTPASKDTNAAAEAAADNPYRRHGAWIACWDAASESIYYWDSNSGELSWNAPAPSTAIERGERLNGFPSPVWDPQREAFFTIDKDGASHWLVDSPSSPTWTTPVVEHRAATDGADGDIASLVVQDY---------------TYDRTSASEESTTFSSWQQGLAIGAAAPEWSSSEVERDRDRDALNNTVNQVDEVLAWDGQQLLAGLPYSFPMLD---RQAVQQL-----PNTCGDEYSKDDINGNDDLHGFFDAQEE--HATRRSAPSFSQAGAGQECAV---EPIDGDARAD---GRVLHLASGEEQQRCLRANAAAVVSEST---QNTTTAGKGNQPDGN------DVFDTEEQPSYLRDSHQDTDQNGLGAVEGGTRSHDESAVAEAYDPALTRL-PLWVQWCSYSPHDGDDTNNQPYFVNEETGESSWVLPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTW---DLLGPRG 821          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHS3_9PHAE3.330e-7734.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHX5_ECTSI1.530e-7432.67WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 710..741
e-value: 7.0
score: 9.1
coord: 374..407
e-value: 1.1
score: 16.1
coord: 744..777
e-value: 43.0
score: 2.2
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 29..58
e-value: 0.0028
score: 26.9
coord: 64..95
e-value: 3.3
score: 16.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 29..49
score: 8.576
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..28
score: 8.87
NoneNo IPR availableGENE3D2.20.70.10coord: 367..413
e-value: 8.3E-7
score: 30.4
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 2..107
NoneNo IPR availablePANTHERPTHR24178:SF9ANKYRIN REPEAT AND SOCS BOX PROTEIN 3coord: 2..107
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..111
e-value: 1.7E-23
score: 84.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..109
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..90
e-value: 1.5E-13
score: 51.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..107
score: 23.498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:700662..703248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.242.1mRNA_D-herbacea_F_contig100.242.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 700662..703248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.242.1 ID=prot_D-herbacea_F_contig100.242.1|Name=mRNA_D-herbacea_F_contig100.242.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=783bp
MHTAAGTGAIESMELLISAGLSPRSRDDGGCTPLHYAAAHGSAECVSFLC
AFARNTTRAGDRRIGDTPLHFAVRASHAVCIQVLLAHAGTELVHEVNAKG
ETPLDVARALCGGGVCDTACLRALEDGATIRRTTIGPRARGGVHSGLESG
VDLQRIMAVWERFFENAAKRACVEQDLATLSVEEYDNDEPRHSGSPPEIQ
AIIEGLGGQGNVYVDDDGQAGPAGRTEGEGGVVETASEGDCDGVWGTRGN
DYGRYEDCVERFEAFHLPDTSGVAPMRVRAWEEEVEPLSDHGRDSSQGAD
HSIHAPTTTTQVGKPTFFKGVVRNETSSTDDGPSLNQTPRSGTERWARSS
YTVKAEIETYSEQYEEVSTAASASLDQAWVACWDAASEAVYYWNSAGGEL
NWNAPPAGSAAVSNRIWDSEREAFFAVDESGESHWLSAGGDVLPATSTDY
DAVNGNRVRGAATAAAVDGDGLTPQVWSSPSFPQGLDIYSLNEDDDNGND
DVFHPAVAEEGHWFDGESTPGDSSCGIGHGDWGGSQATEAFYAATTENLV
GKLHQDRDENASCTFDAQDERKHADGNSALFSVAAGAGTRGVSFNGYIFD
GSTVSDCCPPRIVEEGEETQPPLVHTGDVVEPTTVGAENTDATEIKIDDD
GGVHFFDANMYDTQEQPTNNRPSNAYVDGTAGGLNRKEKQEAEMSSVGKV
EADELARLLPRWVMWCPRSPDAPSYFVNEETGDASWVLPPEVVVPSGGWL
RAWSEEYEAYFYSNQWTAKVTWEMDDLLGVGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR001202WW_dom