prot_D-herbacea_F_contig100.220.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig100.220.1
Unique Nameprot_D-herbacea_F_contig100.220.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length892
Homology
BLAST of mRNA_D-herbacea_F_contig100.220.1 vs. uniprot
Match: D7G1P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P7_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 3.600e-124
Identity = 340/868 (39.17%), Postives = 433/868 (49.88%), Query Frame = 0
Query:   54 ATRRRAQPSLSMSNEGGGFNDPYGDEATP--PPGRAGDDGGSELSAPAPYRDEHTSGASKFRDLLNRAKKVNPSAEGAARAPPPSRPQPAQXXXXXXXXPANAPNYDDDSLWEDEPQIGSPDLPDPPLRNEMPGLNFGSELDDGRPSEGGEREGEGVSVGGGSRFQRMMNQAEYNDQRQEAGVGPRVSPRSPGGKPRAEV-----LTRDEKQRALSEAVDRQQKLMSAARGFDLDDPTLDGPALAKKKALSRAQAEATAGGYVPSSKASDDYLDALKSDSKRKNKELHAKLSGRPVPPEP------RQPAPRAPGDEDTGPYEPQYAQDDDQRQSEYVPQRRRHSTSSIQNESDAYLAGLSGIKIDL-DSNPYLKKQRQEQASASAGVAKNVLKLTPPSGQKGTQPPLSPTMTYAEKLAKAREAKASGSA--GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSYSEKLKQAREAKDTESPAVSSSTPAPPVTSAPVVTSAVPPARTSLEQQVTEDAVLVTEDATRAKVTRVVDMLAERETTGKVDGARAAELRSALIDTQETLRAETYGSSEAAVAPAAPTNPSIDDEDVTQAKIMRVMDLLTEHKTAGLVGEERVAELREALVDTREALRAETYGRNAPATTTISPPLAEVARSAPAGGPTSSAQPQRLVQPPAQPAPIDA----------EAKDTLSRCSILLGAHVHTTLKGQDLQALREGLASSLAIVEAQI----AGTGAQSAQQVRQAPSGAEYVGDGVVPESVNGMQSVGEVLSDMGVGKKPESFEPENDSG-GDKGWAGGSLGEYEKSVATKGLGYLLKHRGGKGYGRGRLTGREAEVMVSTLAELTDILQEEMVD 890
            A  R   P+LSM+++G G    +G E +   P G  GD   + L  P PYR+EHT G ++F++LL RA     + +GA         +P +        P  AP+YDDD+ WE++  IGSPD+PDPPLR  MPGL+ G ELD G    GGE                       ND RQEAG+ PR SPRSP    +        ++++EK+RA+  AV+RQQK+M+ ARG DLDDPTL+G  LA+KKALSRAQAEA AGGYVPSS A+DDYL++LK+DS++K KE  AKL G P+PP          P   A  D       P  + +D +R     PQ+R  ++ SIQN++D Y+A L GIK++L D NPYLK+   E+        +  ++  P    K   PPL P M+YAEK+  A+ AKA+G+A                       XXXXX       +SY+EKLKQA+  K                                               A      + V                A   R  L                       P+   +D+ D +QAK++++MDLLTEHKTAGL GE+RV+ELR +LVD REALRAETYGR+A                                                     E    L RCS LL AHVH+ L GQDLQAL EGLASSL IV AQ+    A                     D  VP    G+QSVG  LSDMGV KKP SF PE   G G  GW GGSLGE EK+ A+K LGYLLKHRGGKGYGRG++TG +AE MV+ LAE+T+I++EEMV+
Sbjct:    2 AVSRDTLPALSMADDGEGAL--FGPEESEGGPAGPGGDS--NPLGPPPPYREEHTPGGTRFKELLARA-----NGQGAPXXXXXXXAKPRRALP-----PEGAPDYDDDNQWEEQ-AIGSPDVPDPPLRENMPGLDLGPELDYGG---GGEAXXXXXXX---XXXXXXXXXXXXNDDRQEAGMAPRASPRSPQEVAKRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRGEPLPPREGPLLSASPPTETATSDVPDKSAAPLSSGEDYER---VKPQKRTAASWSIQNKADQYMASLKGIKVELADDNPYLKESLVEEP-------RQPVRRPPXXXXK---PPLGPQMSYAEKMKLAKGAKAAGTATAAAPSSNVVAAPVATLPPATEAXXXXXPSSGSPALSYAEKLKQAQAQKAA---------------------------------------------AGNGVFPKSVPXXXXXXXXXXXXXXXAPASRRLLEQDM-------------------PSGGLVDEGD-SQAKMVKLMDLLTEHKTAGLEGEDRVSELRHSLVDAREALRAETYGRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAAILRRCSALLQAHVHSGLAGQDLQALVEGLASSLTIVTAQVVTGTAXXXXXXXXXXXXXXXXXXXXDDTGVPAYAGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAASKALGYLLKHRGGKGYGRGKMTGAQAEAMVAALAEVTEIMEEEMVE 770          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1P7_ECTSI3.600e-12439.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 216..719
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..891
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.788

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:408362..413622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.220.1mRNA_D-herbacea_F_contig100.220.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig100 408322..415054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig100.220.1 ID=prot_D-herbacea_F_contig100.220.1|Name=mRNA_D-herbacea_F_contig100.220.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=892bp
MIRKRHRGTILLVIINSWLVPCHGFAYTALHCSSSRHASLVASPGTAHAP
LTCATRRRAQPSLSMSNEGGGFNDPYGDEATPPPGRAGDDGGSELSAPAP
YRDEHTSGASKFRDLLNRAKKVNPSAEGAARAPPPSRPQPAQPRRPLPTR
PANAPNYDDDSLWEDEPQIGSPDLPDPPLRNEMPGLNFGSELDDGRPSEG
GEREGEGVSVGGGSRFQRMMNQAEYNDQRQEAGVGPRVSPRSPGGKPRAE
VLTRDEKQRALSEAVDRQQKLMSAARGFDLDDPTLDGPALAKKKALSRAQ
AEATAGGYVPSSKASDDYLDALKSDSKRKNKELHAKLSGRPVPPEPRQPA
PRAPGDEDTGPYEPQYAQDDDQRQSEYVPQRRRHSTSSIQNESDAYLAGL
SGIKIDLDSNPYLKKQRQEQASASAGVAKNVLKLTPPSGQKGTQPPLSPT
MTYAEKLAKAREAKASGSAGTSPSTAAAAAAASSPVVSSPPSAPQAPPAA
PTVSYSEKLKQAREAKDTESPAVSSSTPAPPVTSAPVVTSAVPPARTSLE
QQVTEDAVLVTEDATRAKVTRVVDMLAERETTGKVDGARAAELRSALIDT
QETLRAETYGSSEAAVAPAAPTNPSIDDEDVTQAKIMRVMDLLTEHKTAG
LVGEERVAELREALVDTREALRAETYGRNAPATTTISPPLAEVARSAPAG
GPTSSAQPQRLVQPPAQPAPIDAEAKDTLSRCSILLGAHVHTTLKGQDLQ
ALREGLASSLAIVEAQIAGTGAQSAQQVRQAPSGAEYVGDGVVPESVNGM
QSVGEVLSDMGVGKKPESFEPENDSGGDKGWAGGSLGEYEKSVATKGLGY
LLKHRGGKGYGRGRLTGREAEVMVSTLAELTDILQEEMVDN*
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