prot_D-herbacea_F_contig10.150.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.150.1
Unique Nameprot_D-herbacea_F_contig10.150.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length149
Homology
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: D7FP92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP92_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.820e-101
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD 148
            MADYEPRGITVRDVAAADFIKAYA+HLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAA+ARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPA+TGIIRHVLQQLE+LKVVEKM+NGGR VTRVGQQDLDRIAGAVVRGDD
Sbjct:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPAATGIIRHVLQQLEALKVVEKMENGGRTVTRVGQQDLDRIAGAVVRGDD 148          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A835ZNM6_9STRA (Ribosomal protein S19e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNM6_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.510e-75
Identity = 110/148 (74.32%), Postives = 125/148 (84.46%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD 148
            MA YEP+G++VRDVA A FIKAYADHLKNTGR ELP W DLVKT   KE+ PYD DWYY+RAAA+ARKVYLRPGRGVGGL+KAFG+  RRGT TN H  AS G+IRH+LQQLE++ VVEK + GGR+VTR GQQDLDRIAGAV RGD+
Sbjct:    1 MATYEPQGVSVRDVAPAKFIKAYADHLKNTGRFELPPWVDLVKTGTQKELAPYDPDWYYVRAAAVARKVYLRPGRGVGGLTKAFGSVERRGTRTNHHARASGGLIRHILQQLETMSVVEKTETGGRKVTREGQQDLDRIAGAVSRGDE 148          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A8J2WX61_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX61_9STRA)

HSP 1 Score: 191 bits (484), Expect = 7.790e-60
Identity = 95/146 (65.07%), Postives = 112/146 (76.71%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRG 146
            M +YE RGITVRDVA A FI+AYA HLKN+ R E+P W DLVKT  HKE+ P D DWY++RAA+IARKVYL+PG GVG L K +G + RRG    T + A+ G+IR VLQQLE  KVVEK  +GGR++TRVGQQDLDRIAG V RG
Sbjct:    1 MVEYEARGITVRDVAPAVFIEAYALHLKNSDRFEIPKWTDLVKTGVHKELGPTDDDWYFVRAASIARKVYLKPGVGVGALRKWYGGQYRRGARAKTFQRAAGGLIRSVLQQLEETKVVEKTASGGRRITRVGQQDLDRIAGQVARG 146          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A8D1BJT9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1BJT9_PIG)

HSP 1 Score: 187 bits (476), Expect = 2.940e-59
Identity = 90/94 (95.74%), Postives = 94/94 (100.00%), Query Frame = 0
Query:   50 MCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAV 143
            MCPYDQDWYYIRAAA+ARKVYLRPGRGVGGLSKAFGTKARRGTMTNTH+PASTGIIRHVLQQLESLKVVEKMDNGGRQ++RVGQQDLDRIAGAV
Sbjct:    1 MCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKVVEKMDNGGRQISRVGQQDLDRIAGAV 94          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A5D6XW04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW04_9STRA)

HSP 1 Score: 188 bits (477), Expect = 9.650e-59
Identity = 95/152 (62.50%), Postives = 116/152 (76.32%), Query Frame = 0
Query:    1 MADYE--PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVRG 146
            MA+Y+  PRG+TVRDV AADFIKAYA+HLK +G++ELPSW D+VKTA  KE  P D DWY++RAA+IARKVYLR   GVG L K +G  ARRG      + AS G+IRH+LQQLE +KVV+K    ++ GGR++T  GQQDLDRIAG VVRG
Sbjct:    1 MAEYDETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPTDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVRHQRFQKASGGLIRHILQQLEEMKVVDKCPEGVNKGGRKITSHGQQDLDRIAGQVVRG 152          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: K3WSU7_GLOUD (Uncharacterized protein n=2 Tax=Oomycota TaxID=4762 RepID=K3WSU7_GLOUD)

HSP 1 Score: 187 bits (476), Expect = 1.370e-58
Identity = 96/151 (63.58%), Postives = 115/151 (76.16%), Query Frame = 0
Query:    1 MADYE--PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVR 145
            MA+YE  PRG+TVRDV AADFIKAYA+HLK +G++ELPSW D+VKTA  KE  P D DWY++RAA+IARKVYLR   GVG L K +G  ARRG      + AS G+IRH+LQQLE +KVVEK    ++ GGR++T  GQQDLDRIAG VVR
Sbjct:    1 MAEYEETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPNDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVHRQHFQQASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRIAGQVVR 151          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A7S1Z1P9_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1Z1P9_TRICV)

HSP 1 Score: 185 bits (470), Expect = 1.120e-57
Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD 148
            MA+ E RGI VRDVAA DFI AYA+HLKN+ + ELP W + VKT   KE+ PY  DWYYIRAA+IARKVYLRPG GVG L K +G   RRGT T   + A++GIIR VL QLE +KV E++  GGR++TRVGQQDLDRIAG V R  +
Sbjct:    1 MAEDEARGICVRDVAAKDFIAAYAEHLKNSDKFELPVWAEQVKTGVFKELAPYGDDWYYIRAASIARKVYLRPGLGVGQLQKWYGGSYRRGTRTEHFRKANSGIIRSVLIQLEGMKVTEQLPGGGRRMTRVGQQDLDRIAGTVFRASE 148          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A024FTV2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FTV2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.260e-57
Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVR 145
            M+DYE  RG+ VRDV AADFIKAYADHLK +G++ELP+W D+VKTA  KE  PYD DWYYIRAA+IARKVYLR   GVG L K +G  ARRG      + AS G+IRH+L QLE +KVVEK    ++ GGR+++  GQQDLDRIAG VV+
Sbjct:    1 MSDYEISRGVNVRDVKAADFIKAYADHLKRSGKMELPNWSDVVKTASFKEHAPYDPDWYYIRAASIARKVYLRQNTGVGSLRKVYGGGARRGVKRQHFQKASGGLIRHILHQLEEMKVVEKCSEGVNKGGRRISSHGQQDLDRIAGQVVK 150          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A7S3LIR0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LIR0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.690e-57
Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAG 141
            MAD +  G TV+DV++  F+K YA+HLK  G++ELPSW DLVKTA HKE+CP+DQDWYYIRAA+IAR VYLRP  G+GGL K +G++ARRGT+T     A++G+IRH+L+QLE++ VVEK D  GR +T  GQQDLDRIAG
Sbjct:    1 MADKQ--GTTVKDVSSHAFVKMYAEHLKRQGKIELPSWVDLVKTATHKELCPFDQDWYYIRAASIARHVYLRPHTGIGGLQKKYGSRARRGTLTEHFHKANSGLIRHILKQLEAIGVVEK-DGKGRIITSTGQQDLDRIAG 138          
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A067C4P4_SAPPC (30S ribosomal protein S19e n=4 Tax=Eukaryota TaxID=2759 RepID=A0A067C4P4_SAPPC)

HSP 1 Score: 182 bits (462), Expect = 1.790e-56
Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVR 145
            MAD+E PRG+TVRDV  ADFIK YA+HLK +G++ELP+W D+VKTA +KE  P D DWYYIRAA+IARKVYLR   G+G L K +G  ARRG +    + AS G+IRH+L QLE +KVVEK    ++ GGR++T  GQ DLDRIAG V R
Sbjct:    1 MADFEAPRGVTVRDVKPADFIKLYAEHLKRSGKMELPNWWDIVKTASYKEHSPVDADWYYIRAASIARKVYLRENTGIGALKKVYGGAARRGVLRQRFQTASGGLIRHILHQLEEMKVVEKCPEGVNKGGRRITSHGQTDLDRIAGQVAR 150          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP92_ECTSI1.820e-10195.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZNM6_9STRA1.510e-7574.32Ribosomal protein S19e n=1 Tax=Tribonema minus Tax... [more]
A0A8J2WX61_9STRA7.790e-6065.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8D1BJT9_PIG2.940e-5995.74Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
A0A5D6XW04_9STRA9.650e-5962.50Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WSU7_GLOUD1.370e-5863.58Uncharacterized protein n=2 Tax=Oomycota TaxID=476... [more]
A0A7S1Z1P9_TRICV1.120e-5762.84Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A024FTV2_9STRA2.260e-5762.67Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A7S3LIR0_9STRA6.690e-5763.12Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A067C4P4_SAPPC1.790e-5660.6730S ribosomal protein S19e n=4 Tax=Eukaryota TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 10..146
e-value: 9.1E-74
score: 261.1
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 10..144
e-value: 2.6E-53
score: 179.4
IPR001266Ribosomal protein S19ePANTHERPTHR1171040S RIBOSOMAL PROTEIN S19coord: 8..143
IPR038111Ribosomal protein S19e domain superfamilyGENE3D1.10.10.2700coord: 2..146
e-value: 1.2E-56
score: 192.8
NoneNo IPR availablePANTHERPTHR11710:SF1440S RIBOSOMAL PROTEIN S19-1-RELATEDcoord: 8..143
NoneNo IPR availablePRODOMPD003854coord: 11..124
e-value: 4.0E-33
score: 349.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 9..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:724580..734685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.150.1mRNA_D-herbacea_F_contig10.150.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 724580..734685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.150.1 ID=prot_D-herbacea_F_contig10.150.1|Name=mRNA_D-herbacea_F_contig10.150.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=149bp
MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEM
CPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPA
STGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR038111Ribosomal_S19e_sf
IPR001266Ribosomal_S19e