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Homology
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: D7FP92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP92_ECTSI) HSP 1 Score: 296 bits (757), Expect = 1.820e-101 Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 1
Query: 1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD 444
MADYEPRGITVRDVAAADFIKAYA+HLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAA+ARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPA+TGIIRHVLQQLE+LKVVEKM+NGGR VTRVGQQDLDRIAGAVVRGDD
Sbjct: 1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPAATGIIRHVLQQLEALKVVEKMENGGRTVTRVGQQDLDRIAGAVVRGDD 148
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A835ZNM6_9STRA (Ribosomal protein S19e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNM6_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.510e-75 Identity = 110/148 (74.32%), Postives = 125/148 (84.46%), Query Frame = 1
Query: 1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD 444
MA YEP+G++VRDVA A FIKAYADHLKNTGR ELP W DLVKT KE+ PYD DWYY+RAAA+ARKVYLRPGRGVGGL+KAFG+ RRGT TN H AS G+IRH+LQQLE++ VVEK + GGR+VTR GQQDLDRIAGAV RGD+
Sbjct: 1 MATYEPQGVSVRDVAPAKFIKAYADHLKNTGRFELPPWVDLVKTGTQKELAPYDPDWYYVRAAAVARKVYLRPGRGVGGLTKAFGSVERRGTRTNHHARASGGLIRHILQQLETMSVVEKTETGGRKVTREGQQDLDRIAGAVSRGDE 148
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A8J2WX61_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX61_9STRA) HSP 1 Score: 191 bits (484), Expect = 7.790e-60 Identity = 95/146 (65.07%), Postives = 112/146 (76.71%), Query Frame = 1
Query: 1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRG 438
M +YE RGITVRDVA A FI+AYA HLKN+ R E+P W DLVKT HKE+ P D DWY++RAA+IARKVYL+PG GVG L K +G + RRG T + A+ G+IR VLQQLE KVVEK +GGR++TRVGQQDLDRIAG V RG
Sbjct: 1 MVEYEARGITVRDVAPAVFIEAYALHLKNSDRFEIPKWTDLVKTGVHKELGPTDDDWYFVRAASIARKVYLKPGVGVGALRKWYGGQYRRGARAKTFQRAAGGLIRSVLQQLEETKVVEKTASGGRRITRVGQQDLDRIAGQVARG 146
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A8D1BJT9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1BJT9_PIG) HSP 1 Score: 187 bits (476), Expect = 2.940e-59 Identity = 90/94 (95.74%), Postives = 94/94 (100.00%), Query Frame = 1
Query: 148 MCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAV 429
MCPYDQDWYYIRAAA+ARKVYLRPGRGVGGLSKAFGTKARRGTMTNTH+PASTGIIRHVLQQLESLKVVEKMDNGGRQ++RVGQQDLDRIAGAV
Sbjct: 1 MCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKVVEKMDNGGRQISRVGQQDLDRIAGAV 94
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A5D6XW04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW04_9STRA) HSP 1 Score: 188 bits (477), Expect = 9.650e-59 Identity = 95/152 (62.50%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 1 MADYE--PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVRG 438
MA+Y+ PRG+TVRDV AADFIKAYA+HLK +G++ELPSW D+VKTA KE P D DWY++RAA+IARKVYLR GVG L K +G ARRG + AS G+IRH+LQQLE +KVV+K ++ GGR++T GQQDLDRIAG VVRG
Sbjct: 1 MAEYDETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPTDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVRHQRFQKASGGLIRHILQQLEEMKVVDKCPEGVNKGGRKITSHGQQDLDRIAGQVVRG 152
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: K3WSU7_GLOUD (Uncharacterized protein n=2 Tax=Oomycota TaxID=4762 RepID=K3WSU7_GLOUD) HSP 1 Score: 187 bits (476), Expect = 1.370e-58 Identity = 96/151 (63.58%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 MADYE--PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVR 435
MA+YE PRG+TVRDV AADFIKAYA+HLK +G++ELPSW D+VKTA KE P D DWY++RAA+IARKVYLR GVG L K +G ARRG + AS G+IRH+LQQLE +KVVEK ++ GGR++T GQQDLDRIAG VVR
Sbjct: 1 MAEYEETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPNDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVHRQHFQQASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRIAGQVVR 151
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A7S1Z1P9_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1Z1P9_TRICV) HSP 1 Score: 185 bits (470), Expect = 1.120e-57 Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD 444
MA+ E RGI VRDVAA DFI AYA+HLKN+ + ELP W + VKT KE+ PY DWYYIRAA+IARKVYLRPG GVG L K +G RRGT T + A++GIIR VL QLE +KV E++ GGR++TRVGQQDLDRIAG V R +
Sbjct: 1 MAEDEARGICVRDVAAKDFIAAYAEHLKNSDKFELPVWAEQVKTGVFKELAPYGDDWYYIRAASIARKVYLRPGLGVGQLQKWYGGSYRRGTRTEHFRKANSGIIRSVLIQLEGMKVTEQLPGGGRRMTRVGQQDLDRIAGTVFRASE 148
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A024FTV2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FTV2_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.260e-57 Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 1 MADYE-PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVR 435
M+DYE RG+ VRDV AADFIKAYADHLK +G++ELP+W D+VKTA KE PYD DWYYIRAA+IARKVYLR GVG L K +G ARRG + AS G+IRH+L QLE +KVVEK ++ GGR+++ GQQDLDRIAG VV+
Sbjct: 1 MSDYEISRGVNVRDVKAADFIKAYADHLKRSGKMELPNWSDVVKTASFKEHAPYDPDWYYIRAASIARKVYLRQNTGVGSLRKVYGGGARRGVKRQHFQKASGGLIRHILHQLEEMKVVEKCSEGVNKGGRRISSHGQQDLDRIAGQVVK 150
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A7S3LIR0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LIR0_9STRA) HSP 1 Score: 184 bits (467), Expect = 6.690e-57 Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 1
Query: 1 MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAG 423
MAD + G TV+DV++ F+K YA+HLK G++ELPSW DLVKTA HKE+CP+DQDWYYIRAA+IAR VYLRP G+GGL K +G++ARRGT+T A++G+IRH+L+QLE++ VVEK D GR +T GQQDLDRIAG
Sbjct: 1 MADKQ--GTTVKDVSSHAFVKMYAEHLKRQGKIELPSWVDLVKTATHKELCPFDQDWYYIRAASIARHVYLRPHTGIGGLQKKYGSRARRGTLTEHFHKANSGLIRHILKQLEAIGVVEK-DGKGRIITSTGQQDLDRIAG 138
BLAST of mRNA_D-herbacea_F_contig10.150.1 vs. uniprot
Match: A0A067C4P4_SAPPC (30S ribosomal protein S19e n=4 Tax=Eukaryota TaxID=2759 RepID=A0A067C4P4_SAPPC) HSP 1 Score: 182 bits (462), Expect = 1.790e-56 Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 1
Query: 1 MADYE-PRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MDNGGRQVTRVGQQDLDRIAGAVVR 435
MAD+E PRG+TVRDV ADFIK YA+HLK +G++ELP+W D+VKTA +KE P D DWYYIRAA+IARKVYLR G+G L K +G ARRG + + AS G+IRH+L QLE +KVVEK ++ GGR++T GQ DLDRIAG V R
Sbjct: 1 MADFEAPRGVTVRDVKPADFIKLYAEHLKRSGKMELPNWWDIVKTASYKEHSPVDADWYYIRAASIARKVYLRENTGIGALKKVYGGAARRGVLRQRFQTASGGLIRHILHQLEEMKVVEKCPEGVNKGGRRITSHGQTDLDRIAGQVAR 150
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 296.6 |
| Seed ortholog evalue | 6.5e-78 |
| Seed eggNOG ortholog | 2880.D7FP92 |
| Preferred name | RPS19 |
| KEGG ko | ko:K02966 |
| KEGG Pathway | ko03010,map03010 |
| KEGG Module | M00177,M00179 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000028,GO:0000184,GO:0000462,GO:0000956,GO:0001906,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0002548,GO:0002682,GO:0002683,GO:0002684,GO:0002697,GO:0002698,GO:0002699,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005829,GO:0005840,GO:0005844,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0006997,GO:0007000,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016477,GO:0017134,GO:0019222,GO:0019439,GO:0019538,GO:0019730,GO:0019838,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0023052,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030312,GO:0030490,GO:0030595,GO:0031347,GO:0031348,GO:0031349,GO:0031369,GO:0031503,GO:0031640,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032103,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035821,GO:0040011,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0042330,GO:0042592,GO:0042742,GO:0042788,GO:0042802,GO:0042803,GO:0042886,GO:0043043,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044364,GO:0044391,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045047,GO:0045088,GO:0045089,GO:0045184,GO:0045595,GO:0045824,GO:0046483,GO:0046700,GO:0046907,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048534,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048872,GO:0050657,GO:0050658,GO:0050727,GO:0050728,GO:0050729,GO:0050776,GO:0050777,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050829,GO:0050896,GO:0050900,GO:0051029,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051241,GO:0051259,GO:0051262,GO:0051270,GO:0051272,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0055044,GO:0060255,GO:0060263,GO:0060264,GO:0060265,GO:0060266,GO:0060267,GO:0060268,GO:0060284,GO:0060326,GO:0061844,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0070972,GO:0071166,GO:0071426,GO:0071428,GO:0071674,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080134,GO:0090150,GO:0090304,GO:0097064,GO:0097159,GO:0097529,GO:0098542,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 |
| EggNOG free text desc. | ribosomal small subunit assembly |
| EggNOG OGs | COG2238@1,KOG3411@2759 |
| Ec32 ortholog description | Ribosomal protein S19e |
| Ec32 ortholog | Ec-08_000310.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011 |
| Exons | 3 |
| Model size | 447 |
| Cds size | 447 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927402.9189863-CDS-D-herbacea_F_contig10:724579..724678 | 1622927402.9189863-CDS-D-herbacea_F_contig10:724579..724678 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig10 724580..724678 - |
| 1690790151.4662385-CDS-D-herbacea_F_contig10:724579..724678 | 1690790151.4662385-CDS-D-herbacea_F_contig10:724579..724678 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig10 724580..724678 - |
| 1622927402.9317286-CDS-D-herbacea_F_contig10:728419..728580 | 1622927402.9317286-CDS-D-herbacea_F_contig10:728419..728580 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig10 728420..728580 - |
| 1690790151.4772274-CDS-D-herbacea_F_contig10:728419..728580 | 1690790151.4772274-CDS-D-herbacea_F_contig10:728419..728580 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig10 728420..728580 - |
| 1622927402.9419878-CDS-D-herbacea_F_contig10:734498..734685 | 1622927402.9419878-CDS-D-herbacea_F_contig10:734498..734685 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig10 734499..734685 - |
| 1690790151.4853055-CDS-D-herbacea_F_contig10:734498..734685 | 1690790151.4853055-CDS-D-herbacea_F_contig10:734498..734685 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig10 734499..734685 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig10.150.1 >prot_D-herbacea_F_contig10.150.1 ID=prot_D-herbacea_F_contig10.150.1|Name=mRNA_D-herbacea_F_contig10.150.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=149bp
MADYEPRGITVRDVAAADFIKAYADHLKNTGRVELPSWCDLVKTAPHKEM
CPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPA
STGIIRHVLQQLESLKVVEKMDNGGRQVTRVGQQDLDRIAGAVVRGDD* back to topmRNA from alignment at D-herbacea_F_contig10:724580..734685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig10.150.1 ID=mRNA_D-herbacea_F_contig10.150.1|Name=mRNA_D-herbacea_F_contig10.150.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=10106bp|location=Sequence derived from alignment at D-herbacea_F_contig10:724580..734685- (Desmarestia herbacea DmunF female)
ATGGCGGACTACGAGCCCCGAGGAATCACCGTGCGTGATGTCGCCGCGGC
TGATTTCATCAAGGCGTACGCGGATCACCTGAAAAACACGGGCCGCGTGG
AGCTCCCGTCGTGGTGCGATTTGGTAAAGACAGCCCCCCACAAGGAGATG
TGCCCTTATGACCAGGACTGGTACTACATTCGCGCGGGTGAGGAGGGAGC
AAAGGAGTTTTTTGCATGTAATGTTCGGTTAGGGACCGGTGTCGTGGCTG
CCCTGCTCTGCGGTATTTTCATGGCACTCAATGTTTCGTATCGTGTCTTA
CATTGTTGTACGGTAGTACTACTCGTACTGCCGTTGTGTTTTGTGCGAGT
GCCCTTTGGTACAGTTTTTGTAGTACTCGTACTTGTACTCTGTCATACTA
CTACTGTTGTGCTCGCATCATATCAATACTCGAACTTCGTGGTGTTTTTG
CTAACTCTTTTCGAGGTTTCGAATTATCTTGATAGCAGTATAAATTTTAG
ATGAAATTATAATTTGCGATCACGGAGGCATCGATATTTCTCTTGTGTCT
CTTCGTCTGGATCATGTATGGTGTACCATATCATCGACTAAACATTTCGT
CTTCAGGCTTGAGGTTGTTGATTTACGAGGTTTCAGCCTGTATGGTTAGG
AAACAGGCGTTTGGTAGCTCATATCGCCAGGCATAAAGCCCTTACAGTAG
GTATACACGTATACACACGGCAGCGGTATCACAACTTTACAGCGCGCTGG
CAAGTTGGCACCTACCTGGTAATATAGTGCGAGTATGATGATAGCATAGG
CCCTGGTAGTCCAGAAATGGGATTGACAGCGGTCGTTTATTCTTTGTTGA
TGCCTGGTCTGCATGCCTTTTCTAAGCATTGCATCACCGGTCCAACGAGT
ACTATGATTTCTACTTTAGTAAAAAACAGTAAGGGTCGCGGAATAAGGCA
GTGGTGTGCCAGCTTCATATTATCGCCTTATTGCTTATTGCGGAAACCCG
CGTTGTTTTTTAATAGTGAATTAGGGCGGTTGCCACCTTACTGAGGTCGC
GAGATTCCCTCAAGAAGGATGGCTACCTACCTATTAAGGGAAATATCGAG
TTTTAGTGTGTTGTCCACGTCAATTAACAGTGTAACAACTGTTGACTTCG
AAGAGCACTGCACGACGAAGGAATGCTGTAAGCTAAAATGAACAGGGACG
CCAATATCCTCCATCGTGGTAAGACGCACAGATGCGTGGTACTTGACACC
TGTTGGAATCATAGTACCAAACACCACAGCAAAGTGAACAGAACATATTT
TTCAACATAAAAACAACCGACTTTGCTGCGTTACTGAGATGACTCTTAGC
ACTTAGCACCGCCTACATCTTGCTACTGTAGGTGCACCACGCCACAACAG
TGCAGCTGTACCGTAACCATATCAGGAACACAACGCCGGAACCATGCAGC
ACAACTCTGCTGTGCTACCACGCCCTCCACTCCTCGCGTCTAAAACAATC
TTCTGATGCCAGCCTGTCGCACTGGCTCAGAGGTATGCGCCTCGATGAAC
GCCATCTTGGCCTTCTGAAGGTGGTAGGCAGCGTCTCCATTGCCACACTC
CTCCGGTGCCTTCTCCAGGCGGCGAAAGCTCGAGGAAAATTTGAGTGTAG
GACAATGGCGGAATGCCCCCGCACCCCGTGCTCTGATCGTGGCCGATCTC
CCTCTCGTTGTCAGTGGAGTCCACTTCCTCCACGGTAGTGCCTTCCAACT
GTTCCGTCTTCTCGTCCAGCGCATTCAATCGCGTAGCTTGAAGGATAATC
CTATTTTGCCAGCTATGCTCCACTGTCGCCCAAGCCTGAGCCGCTTGGAT
GGTGGCCTCGTCGGCACACTCTCCCGGGATGATATCAGAGCTCGCCAACA
AACCGACCAACTCCGTATCAGTGGGTGGTCCTCTTTCGTCTGTCAAGTAC
ACACACGGGCTCGAGTTGAGAAAAATGCCGTGAGCGTAGCCTCCATCTCC
AGCGGAAGGGTTTAGGCTTTGACCCCGCACTTATGATATGGGGTAGGGGG
GTCGATATTAAACGAAAAACATTGCGGGGCAGCGGAGAGCGTTGAGCAAA
GTGAGGAAGGGGAAAAGGGTCTTCGCAAATTGACATGACCAAGTAGGAAG
ATAACACAATATCGAGGGACAGGAGTTGTGCATGAGTATTGCGGATTCGA
TTCGCTACCGGCATCGTAGATACACTACAGCACGGCACTGCTGTGCACTC
GTACAGCAACGGTACGTACAGCATCTTACTCTGCACGATATACAATTGCA
TTGTACAACAAACTGTATCTGGCGATGGCCTTCTCCGCCTCCATACCCCA
TGTTGACTTTAGTAGGTCCGCGGAGTCCCTTGTGTGAGGGTGGTGGCTTT
CGGCCATCCCCGCTGTGCCAACTTTAGTAGGCCACCGTCGCATTTTCATC
GTGCAACGAGTGGGCCGATGAAGGTGGTGACGTACCCACCGAAGTGCACC
AGTGAACCGATGGACATTGAGGCCATTGCGGCGACCAAGCTCGTTTACAG
AAGGAAGCTTCTCGAAATCAAGGTGTCAACCATGCTCATGGCCCCGACCC
TGCGGCCCCAGGCAAGGGAGCGAAAGATGGTTGGCACAGCGGGGATGGTC
GAAGGGCGCCACCCTCACAAGTGGAGGACCACGCGTACCTCAACTCAGCA
TTTTTTTTGCGCCAGATTTTGCGCTGTTCGAGGATCTCGCCCCACGGCGC
TCCTTGTCTGTACATTTCCGCTTGCCTGTGAAGCTGTCGTGGCATCCTTG
GTGGACGACTGGCTATAACGCACATGGAGCAAATGCGATTCAATAGGTTG
TCGCCATCTGGATTCTCCACCTCGCCACAAAGGCCGTGAAGCCGACCACC
ACACCCGATAAACGCAAACATAACATATTCACGAGGTCGCACAAAACAAA
GGAACATAGCGGTGATGTCGATGAGGTTGACTTCTGATTTCCATATATTG
GATTATAGTGCCTAATGTAAAGCAACCAGGAGCAGACGATCGTGCAGCGT
ACGAGCGGTTGTGTGGCGATGACATGTAATTCTAAAACACACTGTCAGAA
GATTGAAAGGGTCACGTGTGCGGTCCGTGTTGCTTGAATGTCAACTGCCT
GCCGTTCGGCCTACATATGATGTGCTTGCGGAGTACTCTATAGAGCGGGT
ACAGCTGCTATGTTGATGTCGGTGAGACGGCTCTTGTCGTTTCAATATGG
CATAATGCCGTCGCACGGCTACGGCAGAAGCGTAGCACGTTACAGCGTGG
AGATTTGGATGTCCGTGGGCCATTAAGTGTACCCCAGTGCCTGGAGAATA
TAAGTTGGTTGGTTGGTGTGTGGCCGTTTGAAGTTACGAAAACAGGATGT
CGAACTGAATAAAGTTCAACTCGGTAAAAACCAAATACATGAGAGATCGT
GTCATGGCCGGGGTCACCAGATGAGAGGCCTGGAGACGCATCTCCATCCT
TTTTGCGTTGCGATTATTAATAGGAGGACGGCACATATCTAGTTGCGGCC
AGCGTGAATCCGTTCTCCCATCCAGCAAGCGAGCCGTTCTATAGGTTAGG
GTTAGGGTTAGAAGAGTGATCAAGGGCCAGCTGATAGTTGTTGGTTGGTA
CAGGCGATGGCACTCGATGCGATAAATAATGCAGAGGCAGCCCCACGCGG
TATCGTTTGCACAACTGGACAATTTATTTTTTAACAGAGGGCCAATTACG
ATTGCCCACGAGAGATATATAAAAAACGGACTTACTAGTTGTTGGTTTGT
CGTGAACACAGCTCTTAGAAGGTAGAAAACAACCATGTGCGCAAAACACG
CAGTTTACCAAGATTAAACAGCATTTGAGAACGGCCACCACGCTATACCT
ACCATAGGTAGTTTTTGTGTCTACATACTCGTAATGTTAATATTTAGTAT
CGTGTGGAAACATGCAGATGTACAACTTAAATATGGCTAAGTTGCAAAAT
GCGACGTGCCTTTGTGGGAACACTAAACGCAACCATTTTGGCTGCTTTGC
ACATTAACGCTTTATTTACAACCTCAGACCTGTAGCAAACACAGTGTTGG
TCGTGATGTTTGTCTCTACATAAATTGGGGCAAGTTCCGTGGGCACAAGT
TGGGGAATCAGAACATGCAGATGAACACTAGAAGAAAAATTGCCTTATAC
CAGGATAAAACAGACGAGAAACCGAGAAACATGTATTGGTTAACGATGTT
GAATCCTCTGAACTTTTTATTTCTGTAGCAGGAAAGGGGCACGCGACAAG
GAAAATATGAGACGTAGAGCAAGAGAGCCGACGAACAAAGAATATCGACA
AGGATCAGATTCATGTTACGTTTTATAGACTGGTGTGTATCAGTAGAGGC
CCAAGAACGCATCATACTGTACTATTAGAAAAAAGAAGGAGAGGGATGCA
CACGGGGAAGGCTGTACCTATGCAACGAAATCGCAGTCTACGACATAACA
ACACACACTGCATTACTTAAGTCCAACCAATGCACCTGTATTATGCGAGT
TGAACAGAATTTTGGAGCTCGATCTGCCCTTTCCCTACCGTGGTCGGCAA
TTACTACACCTTCCGCACCGGCGGCGACACACGACTTCCTCTTCACGACA
TGTTAGGGTTTCTCGGGCTCAATCTTCTCTGCTTCCCCCTATCGCCTTTT
CTGTACGAGCAATGAAGCCTCTTTATTACATGACTAGAGCCGTATCATAG
GCCCGTTTCCTTGCCATGGTGACCCACAAGCCAGCCTTAACCCCAAAGAC
GAATCACGAGTTTTTATTCGTCGCTCGGCATGCTTGAAGCTCGCCCATGA
GATAGTGTCCCGATACATTGTTTCCGGTTGTTGGCTTTTCTTTGTGGTCG
GGAATATCGCGAACGGACATAGGCCTGGATGTATCTTGCATCGGTATCCG
TCTGTCTTGCTGGGTAATCATCGCGGATCGCGACACAGATGGTTTCTGGG
GCAGTGATTGGTGGGGATAACTGAGACCAGCTAAGAACCGAAAACGGTTG
TCGATTACGCGATCTTCAAAGCGTGCTGCGCAACCAATGGATCAACCGGA
CAACTCGCTATTGATATTCTTGGATTTGTTCTGTTGACTACAACTCGTAT
GGCGGAGTGCCAACTGAAAGTTGGCTGATGTGGACAAAGTGCCCGACCAC
CGTGACAAAAGCAGTGCTCACGCTTCTATCGATAATAGGGTTTTGCCCCC
CGGATGAAACTTTTCAACGGGGGACTACCGATGTAGTGAAAACACAGGAC
CATACACCTCAGTCGCGCCGAAGTAGTTGTTGATGCAACATTAACAAACA
ACCTTGCATGCATGGGACTAGCGTTCGGTGACGTTTTATTTCTAGCGTCG
CACCCCCAGGTTCAGGGAGCGATTCTTGCGCAACCATCGTGAAGTTGCGA
GCGCGTCGCCCACGCTGCTGTCGACCACGAGTCTCTGATAGCACAGCTAT
ACGGTAGTCTGCCTCGCTCGTTACGAGGCACCATTGTCTTGGTTCGGTTG
CCTGGCTTGCTTTCATAGGGCGCGCAGAGGCAACTTTGTTTGCACAAGTT
TTCTGTTGTATAGTTCCTGGGCTTGCGATGGTTGGCGTGACCCAGCGATA
GTTCCTCAGGAAGGGCAAAGGATTGGCGTGGATTTGTTTTATGCATTCCT
ATTTTATTGTTACGGCAAGACGTCTTGTCTTCGGTACGGTGTCGTGTTTG
GGTGATACTGTGGGCATTATTGAACACCATGCCTTCTTTCTGGTGTTTTG
TTTTTTTTTCGTTTTTCTGCTGCAACGATTTTGGTTGTATTGCAGGGCTC
CTTGCGAAGGAGGCGCTTGCAAATTGCAGCCGTGATTGCCACTAACGCGC
ATGATTATTCGCCATGTACCGCGACTATACGTTTGTACGGGTCGGGTTAC
CTAAATCTAATGCATGTCGCCTCGCTCGCCATCCACATGGCTGTGTCGCA
CGGTGGTCGGTGGTAGTTTCGGTTGGTGACCATGTGACAGAGAAAAGCTC
GAAACCAACGCAGTCGTTGTTGTGTACTGTACCTTACTTGTCTTGTTTTT
TGCAGCTGCTATCGCGCGCAAGGTGTACCTTCGCCCCGGCCGCGGTGTCG
GTGGACTCAGCAAGGCGTTCGGCACCAAGGCTCGCAGGGGTACCATGACC
AACACCCACAAGCCGGCGTCTACGGGTATCATTCGCCACGTGCTCCAGCA
GCTCGAGTCCCTCAAGGTGATAACTATTCCTCGCTAATTTGATACTCTTG
ACTCTTGACCTTGGTTTCTAGAATGGCATCATGCCTTACTCAATCAATGG
GACTCGATGGAAGACTGCGTAGGGAAACCCACAGTTATCGTCTCAGTTGG
TTGGTCCCCTCGATGAACGCCACCGTCTCTCATCAAGTCTCATTGGATGA
GCTATTATTTATCTGCGTACCACTCTTACTCTATTAACAAGTTCAATGTC
AGGATGAAATTGTTCGCGCCTTTTGACAGGTACAGAGCGCGGCTTTAGGT
TTATTTAGTTGTTGAACGGTGCAAGCGCGGGGCGTGGGTCGAATAATCGG
ATATACGAAGTAGGTTACTACTCGTACGGTGCATGTGTTGGTTAGTATGG
ATTCTAGAAAACTATAGTGCCGTACTTCGTCCAAATATCCGTTTTGTCTC
TCGCGAGGGATAAAACGTTTGTGAGTGCCCCAAAGACTGCCAAGTCTGGT
GCTATTGTAGCTGTGGCCATGTTGGTGAACGCGTCCACAAAAGTAGTGCA
AGCCTTAAACGTCCCTTCCTTGCACTGGGCCGACTTTCGTTAGAACCCGA
AGTACTGTTGGTTTCGAGCCACGCTGGCTGCGGAGCGTGTACTTCTTAGG
CTGTACGCGTTGTCTGGTGAAGATGATTGCGTTGCGGGGATTTGTTTTTT
GGGCGAGTGGACGCGATGCACGTAGTGCAAGGACTTCTGTGATGTGGTTC
GAAGATATTTTTCGGTTGAAAATAATTTTGTCGTTAAAATGTGGATGAGG
CAATAAGATTTAACGTGTGAGTAAGGTCGTACAGTACTCTCAGTTTTTTT
TCTTCCCATTTAATATCTTCGCCCTATTCTTTCTCTAGCTTCTTCTCTCT
TCGTAACTCAGATATTACAATATTTACTACTACCGTAGTTACAATAATAT
TTACTACTACTGTAGTGGTATAGTTGTTGTGTAGTAGTGGTATAGTAGTA
GTAGGTAGTAAGTAGAAACTCTATTAATAGTATGAAACCAAAATACTTCT
TAATTCATACTAATTCAAGACGTTAATTAATTTTCACTTTCGTAGCAGAC
TATATGGAACTTTTCAAATTTCCATACCTTCTGGTCCACTGCCTTCTTCC
ATGATCGCACTCAGCCACAAGGACTTTGGCCCATGACTCGTGTTTATTTG
AGGTCGTACATGTTCCAGTACCGCAGTCAAGTGTAGACAACGCCTCCGCA
GTCGTGCTGAATCTCTCCGAACTGCATTGAAACTCTAGTTTTCCCCGATG
ACAATACCGGACTCTACGAGTAGCTGTTTTTCTTTTTTTCTGCTATAATG
CGGTGGACGGGTAAATTTATAGCTTAACCTCATACTTAAGTACAATAAGC
TGTGTATGTCGTGCTGATTGAACTCTGGTGTAGTACATGTTCAATGAGCC
GTCGGGCCGTGTAACGTTCCTTGGTACCCTTGTGGTATTTTTGGGATGCT
TCGTCCATTATAGCAAAAATAGCTGGTATTGGTTTGACAGAAAAGTCCGC
ATCCGACTCGAAACCGGTGTTGCTAATGCCTGGGTCAAGTTGTCGCTCAT
CGAATAGACCCGACGCATGAAGTGTAGAAAGTCCCCACGACTCACGGATG
CCTGGGGCAGCTTCTGTCTGACCATATTGGTCATTAGTAGACAGCTTGCA
GTGCGTGATGCAAAATCGTTTTTGTGTTGCATAGTTATTGGGACAGCGAT
TATACAGCAGCGTTTTTGCTTGTGGCAGTACATGCGCTGTAGGGAGGGTG
CCTTTGACGAAAATCCACTTATTATGAGTAAGAATACAGTAACTATTAAC
TCCTACTCATTCTGAGTGTGCCACGCTGCACTGCTGTATATACTTGTAGA
ATGTTGAGTTGTATCGGTGCGTTTTAATATTTTACGTTTTGTGCACTTGT
TTCATTCGTTGTGTGCTGTGACGAGTTTTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTTTTTTTTTAGTACGACCACAAAGGATTATGAAACAAGAACCTC
CTACTCATTCTGAGCGCTGCCTCGAATGCACAAGCGTTGCTTTTCGCAGT
TTAAATATTAGTGACTTTCTTGTTGCTCTTGCGGTGGTAGTCCTCGTGTG
GACGGGTGCGGTGATGAAGTTTCTTTTAGTATGATGATAAAGGATTATGA
AACAAGAACCTCCTACTCATTCTGAGCGCCCCTTCCCCATCGCACAAGTG
TTGCTTTTCGCAGTTTAATTATTAGTGATTGTCTTGCTCTTGCATTAGTA
TAGTCCTCGTTTGAACGGGTGCGGTGATGAAGTTTCTTTTTGTATGACCT
CAAAGGATTATGAAACAAGAACCTCCTACTCATTCTGAGCGCCCGTACGC
ACTTGGCACACTGACTACATTTCCATACCCAGTTTAATAGTGAACTCTGA
AATTAACATGTTGGCGTTTGAATAAGGGTAAAAAGTCTGTCGTCGTTTGC
GGTTGGCGGGAGTTATCCCCTGAGTTTTGCTGCAGGTGTACTGGTGCTGC
AGAGCATTACCGTGGAAGCTCGGCGAAACAGGGGTTCAGCAACGCTTTGT
GGCGACAGAGGTTATCCCTGCTCCATGCCGGCCTTGCCGCCGTTAAGAGT
GTCGGGTCTTTGATCAATAGTCGATGGTGTTTAGAGTAGACGCTGCTGAA
ACAAGTGCGGTTGAAGTCGTGCAGTGTGGTTCCAAGGGTGAACATTGAAC
ATTTACGGGCGCATCTGCCAAATTTGATCATGCCCATGTTGAAGGTGTAT
CTTCTGGGACAGGAGAGCTCTATTGCGTGCGCTGGTTGATTACATGTAGC
AGCTATGATTTTTGTTGTTGTTGCCGTTTTTTCATGTGTGTAAGGCGTTG
TTTACTGTCGAATGTTTTCCCCGAGCGTATATTGCTTTCGGAGGGGTTGC
TGTGATGAAGTTCTTTTTGTATGACCACAAAGGATTATGAAACAAGAACC
TCCTACTCATTCTGAGCGACTCCTGTCTGTTTGCGTTTCGTCGTTTTTGG
TGTCTGTGTTAGGTTTGAAATACCGTGTAGTGCTATACTGGCATGTAGTG
TCATACTGGGTCTCGTGCTGTGAGACAATACTGTATTTTACGCTTGTTGT
ATCATGAAGATTCTGGCCTGTGCCGTGCAGGACTGTATGGTACTTTTTTT
TTTCTTCCTGTTTTGTGTTGTCAAAACCAACGAGATCTAGAGAGACGCCC
CCTCGTGTTTTCGAACACTGCTCTCTAGATTGAGGCAGGCACTGACCAAA
AAGTCTTGAATCCCAAATGAAGCACATCGTCCGCGTCTCGAATTTTTACC
ACATATCACGGTCATGTTCACTCAAAACCTCGTCTTAAGTTCGATTCAGG
TGAACACACATGACCCAACCAGTTCCTGAACGACAGGGGCTATCAAAACG
GCAAAACCTCGCTGAAACCCAACGTAAATCATGCAAACTTATACAAAGCC
GGGTATTGGGTACCTCGTGCACTTACTCACGCCGGCTCTCTCTTTTCTCC
GATACAATGTCTTGTATAACGTACAGAACTCTTAACCCAAGATATAAATG
TGCGACTTCGTATCGCGTTCTTTGCGACATTTCGTAGTGTGCTCGGTGTC
TTCCGCAGACATCGAACTGTAGTATTTTGTCATCCCTCAACAAATGATTT
CACAAGCGCGGCTGTATCCGTTGTCGTATTTGTGCCGTCTGCCAACGTTA
TCCCCAGGTGGTAGAAAAAATGGACAACGGAGGCCGGCAGGTGACCCGCG
TGGGCCAGCAGGACCTTGACCGGATCGCCGGTGCCGTTGTCCGCGGCGAT
GATTAA back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig10:724580..734685- >mRNA_D-herbacea_F_contig10.150.1 ID=mRNA_D-herbacea_F_contig10.150.1|Name=mRNA_D-herbacea_F_contig10.150.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=894bp|location=Sequence derived from alignment at D-herbacea_F_contig10:724580..734685- (Desmarestia herbacea DmunF female)
ATGGCGGACTACGAGCCCCGAGGAATCACCGTGCGTGATGTCGCCGCGGC
TGATTTCATCAAGGCGTACGCGGATCACCTGAAAAACACGGGCCGCGTGG
AGCTCCCGTCGTGGTGCGATTTGGTAAAGACAGCCCCCCACAAGGAGATG
TGCCCTTATGACCAGGACTGGTACTACATTCGCGCGGATGGCGGACTACG
AGCCCCGAGGAATCACCGTGCGTGATGTCGCCGCGGCTGATTTCATCAAG
GCGTACGCGGATCACCTGAAAAACACGGGCCGCGTGGAGCTCCCGTCGTG
GTGCGATTTGGTAAAGACAGCCCCCCACAAGGAGATGTGCCCTTATGACC
AGGACTGGTACTACATTCGCGCGGCTGCTATCGCGCGCAAGGTGTACCTT
CGCCCCGGCCGCGGTGTCGGTGGACTCAGCAAGGCGTTCGGCACCAAGGC
TCGCAGGGGTACCATGACCAACACCCACAAGCCGGCGTCTACGGGTATCA
TTCGCCACGTGCTCCAGCAGCTCGAGTCCCTCAAGCTGCTATCGCGCGCA
AGGTGTACCTTCGCCCCGGCCGCGGTGTCGGTGGACTCAGCAAGGCGTTC
GGCACCAAGGCTCGCAGGGGTACCATGACCAACACCCACAAGCCGGCGTC
TACGGGTATCATTCGCCACGTGCTCCAGCAGCTCGAGTCCCTCAAGGTGG
TAGAAAAAATGGACAACGGAGGCCGGCAGGTGACCCGCGTGGGCCAGCAG
GACCTTGACCGGATCGCCGGTGCCGTTGTCCGCGGCGATGATTAAGTGGT
AGAAAAAATGGACAACGGAGGCCGGCAGGTGACCCGCGTGGGCCAGCAGG
ACCTTGACCGGATCGCCGGTGCCGTTGTCCGCGGCGATGATTAA back to top
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