mRNA_D-herbacea_F_contig111.956.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 322 bits (826), Expect = 1.220e-109 Identity = 160/216 (74.07%), Postives = 181/216 (83.80%), Query Frame = 1
Query: 1 MKISWCAATGLG-AVVLVASPAAEGQVVTQQQQITMFNTEDFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGMSD 645
MK S+C+A GL A ++S A VVT QQQITMFN EDF F LGGPEPD VDGFQ+R TLGQ+P+L+GQGI+MAL NLD C INLPH+HPRATEM Y I GE +RVAFVEENGGEGAVVNDLSQGDV FFPQGLIHY QNLGCEP TFLAALN++DPGAVTITTRFFELPSEAIQASLNF+DP ++ LI +LP+APA ARR+CL RCG++D
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLAD 216
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 313 bits (801), Expect = 9.950e-106 Identity = 153/215 (71.16%), Postives = 180/215 (83.72%), Query Frame = 1
Query: 1 MKISWCAATGLGAVVLVASPAAEGQVVTQQQQITMFNTEDFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGMSD 645
MK S+CAA G + S VVT QQQIT++N EDF F+LGGPEPD LVDGFQLR + QLP+L+GQGISM L NLDPCAINLPH+HPRATEM+Y I+GE++RVAFVEENGGEGAVVNDL+QGDVAFFPQGLIHY QNL CEPATFLAALN+EDPGA+TITTRFFELP EAIQAS+NF++P ++ LI +LP+APA AR++CL RC M++
Sbjct: 1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAE 215
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 176 bits (447), Expect = 7.690e-52 Identity = 96/187 (51.34%), Postives = 122/187 (65.24%), Query Frame = 1
Query: 82 TQQQQITMFNTEDF-TFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFD-DPQIKALIAALPEAPATARRECLARCG 636
T+ Q++ FN EDF T L P+ + G L + LG +P+L QG++M L NL+PC NLPHVHPRA+E +Y I+G V+V F+EENG + +VNDL QG F PQG IHY NLGCE A +AA N+EDPG +TI +FF+LP AI ASL DP+I+AL +LP PA ECL RCG
Sbjct: 37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCG 221
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG) HSP 1 Score: 150 bits (380), Expect = 6.040e-42 Identity = 82/190 (43.16%), Postives = 115/190 (60.53%), Query Frame = 1
Query: 79 VTQQQQITMFNTEDFTFN-LGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFE-LPSEAIQASLN-FDDPQIKALIAALPEAPATARRECLARCGM 639
+T+ Q++++ + +DF FN L ++ DG + T P+L G I+M +G + PC+INLPH+HPRATE+ + +G K F EENG +VN L +G+V FP G IH+ QNL CEPA F+AA NSEDPG TI + F LP++ + ASL Q+K L LP+ PA +EC RCG+
Sbjct: 46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQG-KFEAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 149 bits (377), Expect = 7.370e-41 Identity = 79/181 (43.65%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 106 FNTEDFTFNLGGPEP---DNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 639
F+ EDF F+ D+L G ++ V L + P ++ G+S + ++ PC INLPHVHPRATE LY IEG+ V + FV + ++NDL + V FFP+G +HY QN+ CE A F++ L++EDPG + +++ LP EA+ A+ N D I L LPE PA AR ECLARCG+
Sbjct: 105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQ-VTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGL 282
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 150 bits (379), Expect = 7.950e-41 Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 121 FTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATA--RRECLARCGM 639
F FN E D G + ++ Q P+L G G+S L +L PC+IN PHVHPRATE++Y I+G +V V F EENGG V ND+ +GD AFFP LIH+ N CEPA F+A LNS+D G TI FF LP + + +L D+ ++ L LP PA R EC +CG+
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.740e-40 Identity = 82/185 (44.32%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 109 NTEDFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEG--EKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFF------ELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 639
N EDFTFN+ + G + ++ QLPSL G+ ++M L PC INLPHVHPRATE+LY I+ E V AFVEENGG + N + G+ AFFPQGL H N+GC PAT +AAL S+D G TIT+ E E + A+L Q+ L+ P+ PA EC RCG+
Sbjct: 58 NNEDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGLAAAEGLGEGLAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.350e-40 Identity = 81/182 (44.51%), Postives = 104/182 (57.14%), Query Frame = 1
Query: 118 DFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEG--EKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPS------EAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 639
DF F+L G G + ++ QLPSL G+ ++M L+PC INLPHVHPRATE+LY ++ E V AFVEENGG + N + G+ AFFPQGL H N+GC PAT +AAL S+D G TITT E + E + A+L Q+ LI P+ PA EC RCG+
Sbjct: 9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.750e-39 Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 1
Query: 118 DFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEG--EKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPS------EAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 639
DF F+L G + G + ++ QLPSL G+ ++M L+PC INLPHVHPRATE+LY ++ E V AFVEENGG + N + G+ AFFPQGL H N+GC PAT +AAL S+D G TITT + + E + A+L Q+ LI P+ PA EC RCG+
Sbjct: 60 DFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 142 bits (357), Expect = 8.280e-39 Identity = 78/194 (40.21%), Postives = 107/194 (55.15%), Query Frame = 1
Query: 70 GQVVTQQQQITMFNTEDFTFNLGGPEPDNLVD----GFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 639
G V+ + + F+ EDF F+ E VD G + + P ++ ++ + PC INLPHVHPR TE Y IEGE + V FV E+G V+ND+ FFPQGL+HY QN+GCEPA F++ L+S DPG + I LP EAI A+ + D+ + + LP+ PA R ECL RCG+
Sbjct: 10 GAQVSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGE-LTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.956.1 >prot_D-herbacea_F_contig111.956.1 ID=prot_D-herbacea_F_contig111.956.1|Name=mRNA_D-herbacea_F_contig111.956.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=215bp MKISWCAATGLGAVVLVASPAAEGQVVTQQQQITMFNTEDFTFNLGGPEPback to top mRNA from alignment at D-herbacea_F_contig111:607238..609663+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig111.956.1 ID=mRNA_D-herbacea_F_contig111.956.1|Name=mRNA_D-herbacea_F_contig111.956.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=2426bp|location=Sequence derived from alignment at D-herbacea_F_contig111:607238..609663+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig111:607238..609663+ >mRNA_D-herbacea_F_contig111.956.1 ID=mRNA_D-herbacea_F_contig111.956.1|Name=mRNA_D-herbacea_F_contig111.956.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1290bp|location=Sequence derived from alignment at D-herbacea_F_contig111:607238..609663+ (Desmarestia herbacea DmunF female)back to top |