prot_D-herbacea_F_contig111.956.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig111.956.1
Unique Nameprot_D-herbacea_F_contig111.956.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length215
Homology
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 1.220e-109
Identity = 160/216 (74.07%), Postives = 181/216 (83.80%), Query Frame = 0
Query:    1 MKISWCAATGLG-AVVLVASPAAEGQVVTQQQQITMFNTEDFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGMSD 215
            MK S+C+A GL  A   ++S A    VVT QQQITMFN EDF F LGGPEPD  VDGFQ+R  TLGQ+P+L+GQGI+MAL NLD C INLPH+HPRATEM Y I GE +RVAFVEENGGEGAVVNDLSQGDV FFPQGLIHY QNLGCEP TFLAALN++DPGAVTITTRFFELPSEAIQASLNF+DP ++ LI +LP+APA ARR+CL RCG++D
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLAD 216          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 9.950e-106
Identity = 153/215 (71.16%), Postives = 180/215 (83.72%), Query Frame = 0
Query:    1 MKISWCAATGLGAVVLVASPAAEGQVVTQQQQITMFNTEDFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGMSD 215
            MK S+CAA G      + S      VVT QQQIT++N EDF F+LGGPEPD LVDGFQLR   + QLP+L+GQGISM L NLDPCAINLPH+HPRATEM+Y I+GE++RVAFVEENGGEGAVVNDL+QGDVAFFPQGLIHY QNL CEPATFLAALN+EDPGA+TITTRFFELP EAIQAS+NF++P ++ LI +LP+APA AR++CL RC M++
Sbjct:    1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAE 215          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 176 bits (447), Expect = 7.690e-52
Identity = 96/187 (51.34%), Postives = 122/187 (65.24%), Query Frame = 0
Query:   28 TQQQQITMFNTEDF-TFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFD-DPQIKALIAALPEAPATARRECLARCG 212
            T+ Q++  FN EDF T  L  P+   +  G  L  + LG +P+L  QG++M L NL+PC  NLPHVHPRA+E +Y I+G  V+V F+EENG +  +VNDL QG   F PQG IHY  NLGCE A  +AA N+EDPG +TI  +FF+LP  AI ASL    DP+I+AL  +LP  PA    ECL RCG
Sbjct:   37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCG 221          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG)

HSP 1 Score: 150 bits (380), Expect = 6.040e-42
Identity = 82/190 (43.16%), Postives = 115/190 (60.53%), Query Frame = 0
Query:   27 VTQQQQITMFNTEDFTFN-LGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFE-LPSEAIQASLN-FDDPQIKALIAALPEAPATARRECLARCGM 213
            +T+ Q++++ + +DF FN L      ++ DG +    T    P+L G  I+M +G + PC+INLPH+HPRATE+ +  +G K    F EENG    +VN L +G+V  FP G IH+ QNL CEPA F+AA NSEDPG  TI + F   LP++ + ASL      Q+K L   LP+ PA   +EC  RCG+
Sbjct:   46 ITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQG-KFEAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA)

HSP 1 Score: 149 bits (377), Expect = 7.370e-41
Identity = 79/181 (43.65%), Postives = 111/181 (61.33%), Query Frame = 0
Query:   36 FNTEDFTFNLGGPEP---DNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 213
            F+ EDF F+         D+L  G  ++ V L + P ++  G+S +  ++ PC INLPHVHPRATE LY IEG+ V + FV     +  ++NDL +  V FFP+G +HY QN+ CE A F++ L++EDPG + +++    LP EA+ A+ N D   I  L   LPE PA AR ECLARCG+
Sbjct:  105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQ-VTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGL 282          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 150 bits (379), Expect = 7.950e-41
Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 0
Query:   41 FTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATA--RRECLARCGM 213
            F FN    E D    G  +   ++ Q P+L G G+S  L +L PC+IN PHVHPRATE++Y I+G +V V F EENGG   V ND+ +GD AFFP  LIH+  N  CEPA F+A LNS+D G  TI   FF LP + +  +L  D+ ++  L   LP  PA    R EC  +CG+
Sbjct:  147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.740e-40
Identity = 82/185 (44.32%), Postives = 105/185 (56.76%), Query Frame = 0
Query:   37 NTEDFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEG--EKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFF------ELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 213
            N EDFTFN+   +      G   + ++  QLPSL G+ ++M    L PC INLPHVHPRATE+LY I+   E V  AFVEENGG   + N +  G+ AFFPQGL H   N+GC PAT +AAL S+D G  TIT+         E   E + A+L     Q+  L+   P+ PA    EC  RCG+
Sbjct:   58 NNEDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGLAAAEGLGEGLAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.350e-40
Identity = 81/182 (44.51%), Postives = 104/182 (57.14%), Query Frame = 0
Query:   40 DFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEG--EKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPS------EAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 213
            DF F+L G        G   + ++  QLPSL G+ ++M    L+PC INLPHVHPRATE+LY ++   E V  AFVEENGG   + N +  G+ AFFPQGL H   N+GC PAT +AAL S+D G  TITT   E  +      E + A+L     Q+  LI   P+ PA    EC  RCG+
Sbjct:    9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.750e-39
Identity = 80/182 (43.96%), Postives = 105/182 (57.69%), Query Frame = 0
Query:   40 DFTFNLGGPEPDNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEG--EKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPS------EAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 213
            DF F+L G +      G   + ++  QLPSL G+ ++M    L+PC INLPHVHPRATE+LY ++   E V  AFVEENGG   + N +  G+ AFFPQGL H   N+GC PAT +AAL S+D G  TITT   +  +      E + A+L     Q+  LI   P+ PA    EC  RCG+
Sbjct:   60 DFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240          
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 142 bits (357), Expect = 8.280e-39
Identity = 78/194 (40.21%), Postives = 107/194 (55.15%), Query Frame = 0
Query:   24 GQVVTQQQQITMFNTEDFTFNLGGPEPDNLVD----GFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEMLYTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPATFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAPATARRECLARCGM 213
            G  V+  + +  F+ EDF F+    E    VD    G   +   +   P ++   ++     + PC INLPHVHPR TE  Y IEGE + V FV E+G    V+ND+      FFPQGL+HY QN+GCEPA F++ L+S DPG + I      LP EAI A+ + D+  +  +   LP+ PA  R ECL RCG+
Sbjct:   10 GAQVSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGE-LTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW6_ECTSI1.220e-10974.07Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JV79_9PHAE9.950e-10671.16Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
A0A507FDZ0_9FUNG7.690e-5251.34Cupin type-1 domain-containing protein n=2 Tax=Chy... [more]
A0A433DF28_9FUNG6.040e-4243.16RmlC-like cupin n=2 Tax=Jimgerdemannia flammicoron... [more]
A0A0L0FR85_9EUKA7.370e-4143.65Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A0G4EJ88_VITBC7.950e-4145.71Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A835Z488_9STRA1.740e-4044.32RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A835YZF9_9STRA6.350e-4044.51RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A836CNU2_9STRA2.750e-3943.96RmlC-like cupin domain-containing protein n=7 Tax=... [more]
A0A0L0GAB9_9EUKA8.280e-3940.21Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 157..172
score: 33.28
coord: 91..111
score: 40.75
coord: 124..144
score: 43.63
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 43..190
e-value: 1.5E-32
score: 124.1
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 43..189
e-value: 2.9E-24
score: 85.4
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 15..198
e-value: 3.4E-44
score: 152.7
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 33..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.704
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 41..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig111contigD-herbacea_F_contig111:607238..609663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig111.956.1mRNA_D-herbacea_F_contig111.956.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig111 607238..609663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig111.956.1 ID=prot_D-herbacea_F_contig111.956.1|Name=mRNA_D-herbacea_F_contig111.956.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=215bp
MKISWCAATGLGAVVLVASPAAEGQVVTQQQQITMFNTEDFTFNLGGPEP
DNLVDGFQLRFVTLGQLPSLEGQGISMALGNLDPCAINLPHVHPRATEML
YTIEGEKVRVAFVEENGGEGAVVNDLSQGDVAFFPQGLIHYVQNLGCEPA
TFLAALNSEDPGAVTITTRFFELPSEAIQASLNFDDPQIKALIAALPEAP
ATARRECLARCGMSD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR006045Cupin_1
IPR001929Germin