mRNA_D-herbacea_F_contig111.936.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: D7G0Z4_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z4_ECTSI) HSP 1 Score: 260 bits (665), Expect = 4.420e-85 Identity = 130/189 (68.78%), Postives = 155/189 (82.01%), Query Frame = 1
Query: 1 RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW 567
R+ GS L+LRGET V+EHIGRLYT FLNTTSTLDWVRFLVEVEEL + R GG+ G VLFQ+YDMPWPVKDREVV++RSVRLDKRAKKMIA+ +ST+HP RP+ +A+VRAIV+RTSWI TSLG SKT+I+FETR DP+G+LP+A+V F+Q KFPRETVAGFV+SA+ V +H AM KW
Sbjct: 81 RVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSR--------RGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVAGFVSSARNVELHPAMTKW 261
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A6H5L2R4_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R4_9PHAE) HSP 1 Score: 179 bits (454), Expect = 4.090e-55 Identity = 83/113 (73.45%), Postives = 102/113 (90.27%), Query Frame = 1
Query: 229 MPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW 567
MPWPVKDREVV++RSVRLDKRAKKMIA+ +ST+HP RP+ +A+VRAIVHRTSW+ TSLGGSKT+I+FETR DP+G+LP+A++ FMQ KFPRETVAGFV+SA+ V +H AM KW
Sbjct: 1 MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMIGFMQVKFPRETVAGFVSSARNVELHPAMTKW 113
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A328C4Z6_9DELT (START domain-containing protein n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C4Z6_9DELT) HSP 1 Score: 95.1 bits (235), Expect = 8.120e-21 Identity = 60/191 (31.41%), Postives = 98/191 (51.31%), Query Frame = 1
Query: 1 RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 567
++ GS + + RGE V + HIG+L T F + WV E L G+LS + R+ +P+P+KDR+ VLQ RLD+ + +A+ +S + RP N VRA+ + T + F +L G +T + E DP+G LP +V+ +Q+ +P +T+ G + AK P++ +A W
Sbjct: 43 QVEGSSVFAFRGEIVADVHIGKLLTVFADGNQRRHWVDRYDEHGTLER---------GELSE-------RYWIRFGLPFPIKDRDYVLQTEGRLDQANQVFVASIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPDWLVNRIQRDWPSKTLGGLIRQAKKGDQPLYGPVADW 217
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A5C6UNU6_9DELT (START domain-containing protein n=6 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6UNU6_9DELT) HSP 1 Score: 94.4 bits (233), Expect = 2.060e-20 Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 1 RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 567
++ GS + + RGE V + HIG++ T F + WV E L G+LS + R+ +P+P+KDR+ VLQ + RL++ + IAT +S + RP N VRA+ + T + F +L G +T + E DP+G LP +V+ +Q+ +P +T+ G + AK P++ +A W
Sbjct: 55 QVEGSSVFAFRGEIVADVHIGKILTVFADGDQRRHWVDRYDEHGTLDR---------GELSE-------RYWIRFGLPFPIKDRDYVLQTNGRLNQDDQVFIATIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPNWLVNRIQRDWPSKTLGGLIRQAKKGDQPLYGPVADW 229
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A2E7UXM6_9DELT (START domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UXM6_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 4.600e-20 Identity = 62/194 (31.96%), Postives = 97/194 (50.00%), Query Frame = 1
Query: 4 IPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSV-RLDKRAKKMIATCKSTEHPDRPVNTAS---VRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKG--VPVHSAMAKW 567
+ G + + RG T VN + L + +++ + WV L E E + ++ + +++QR+DMPWPV DRE +LQ +V R D+R K+ ST P P T VR ++ +SW FT L S+T +D ADP GA P +++ +Q+ FP T++ F A+ VP+ S A W
Sbjct: 81 VEGERVEATRGVTTVNVPLCELISFYVDPSLATTWVDMLTEYEVIELNARQS----------------IVWQRFDMPWPVADREFLLQVNVTRPDERTVKVSLV--STTDPRFPPPTDGDGLVRGVMSPSSWTFTRLSESRTKVDMVGHADPSGAFPAWLINIIQQTFPYNTLSAFAREAENGKVPLRSECADW 256
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A4D9CVN7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVN7_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.740e-19 Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 16 GLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW 567
G +SLRG+ V+ HI + T FLNT+ + +WV +L EEL G + +++Q +DMP P+ DRE +++R+V D+R + A S EH +P + VR +T W F + G +T I E+ +P+ + +V MQ + R ++ + K H + W
Sbjct: 160 GTISLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPT---------------GQENAHIIYQFFDMPLPLSDREFLMRRTVVSDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFVHW 328
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A3C1KYH3_9DELT (START domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1KYH3_9DELT) HSP 1 Score: 82.4 bits (202), Expect = 1.120e-15 Identity = 55/191 (28.80%), Postives = 85/191 (44.50%), Query Frame = 1
Query: 4 IPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSL-GGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 567
+ GS + + +G N H R+ F + WV ++L V +K + + R+ +PWPV DR+ VL LD + + M A +S P + VR V T + F +L G KT + E + DPRG LP +V+ +QKK+P +T+ G V +AK + H W
Sbjct: 60 VKGSNMFAFKGVMTANVHFARVARVFSTSKLRRTWVDRWAADKDLKVHNSKERTY---------------YIRFGLPWPVSDRDYVLNTKATLDVKRRIMTARIRSVNFPGYGPKSCCVRGKVVGTFYKFEALPGAEKTRLTVEVQTDPRGLLPAWLVNLIQKKWPYKTLTGLVRAAKKPNIQNHPDYVDW 235
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A2E7CH35_9PROT (START domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2E7CH35_9PROT) HSP 1 Score: 79.7 bits (195), Expect = 4.430e-15 Identity = 52/188 (27.66%), Postives = 84/188 (44.68%), Query Frame = 1
Query: 13 SGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEEL-SVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 567
S L + RGE V+ H L L+ +WV + + L S+++N +L Q YD+PWP++DR+ +L + ++ D K + S P P N +RA RT W F++L T + E DP+G+LP +V+ +QK +P ++ AK +P W
Sbjct: 35 SPLFAFRGEANVDVHTSVLLGLLLDDPKGAEWVDLMNFSKRLKSINSNTH----------------ILHQSYDLPWPIQDRDYLLNQEIQYDHSNKVVTIEFHSIIDPILPENECCIRAYATRTYWKFSALPNGSTDVVVEVLTDPKGSLPAWLVNLIQKDWPYNSIHNLSERAKKGDIPKEEVTKDW 206
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A2E8HZ83_9PROT (START domain-containing protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E8HZ83_9PROT) HSP 1 Score: 77.8 bits (190), Expect = 3.210e-14 Identity = 46/186 (24.73%), Postives = 89/186 (47.85%), Query Frame = 1
Query: 4 IPGSGLLSLRGETVVNEHIGRLYTTFL--NTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVH 549
+P S L +GE ++N + ++ + +T + L W L + ++ V + +D+PWP+ DR+ VL+ + +D + +++ S +H P T VRA++ ++S++F G KT + + DP+G LP+ +V+ +QK +P +T++ A G P H
Sbjct: 39 VPDSPLKQFKGEMLMNAPLSKVAHVLIKSDTETRLRWTSRLFKFSVFEEEADRL----------------VYYTAFDLPWPIADRDYVLEGKLNIDNKNNRVVVDIASVKHAKAPP-TVGVRAVIDKSSYVFEPRPGGKTFVTVDISTDPKGLLPSWLVNAIQKGWPTKTLSAMEVEAMKPGTPHH 207
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A7V4G0G2_9DELT (START domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4G0G2_9DELT) HSP 1 Score: 77.4 bits (189), Expect = 6.180e-14 Identity = 52/193 (26.94%), Postives = 96/193 (49.74%), Query Frame = 1
Query: 4 IPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGF------VTSAKGVPVHSAMAK 564
+PGS LL++RG VN + + + ++TT +W+ +VE + +S N Y + ++R +P+P+ DR+ V++ V +D K+++ +ST+HP PV T VR V +++ ++ +T + E DP+G++P +V+ +QK + T+ G VT + AM K
Sbjct: 62 VPGSPLLAIRGVADVNGSLLHVASVLMDTTRITEWMDRVVEARRIHMS-NPLHY--------------IEYERASVPFPLTDRDFVVESWVEVDAAHKRVLLRSRSTQHPSAPV-TKLVRGEVISSAFTLYAIDAHRTRVMGEVHMDPKGSIPKWLVNLVQKGWAHTTITGLRRQVARVTGPDNPDLEDAMRK 238 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig111.936.1 >prot_D-herbacea_F_contig111.936.1 ID=prot_D-herbacea_F_contig111.936.1|Name=mRNA_D-herbacea_F_contig111.936.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=190bp RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTback to top mRNA from alignment at D-herbacea_F_contig111:60062..60957+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig111.936.1 ID=mRNA_D-herbacea_F_contig111.936.1|Name=mRNA_D-herbacea_F_contig111.936.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=896bp|location=Sequence derived from alignment at D-herbacea_F_contig111:60062..60957+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig111:60062..60957+ >mRNA_D-herbacea_F_contig111.936.1 ID=mRNA_D-herbacea_F_contig111.936.1|Name=mRNA_D-herbacea_F_contig111.936.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1140bp|location=Sequence derived from alignment at D-herbacea_F_contig111:60062..60957+ (Desmarestia herbacea DmunF female)back to top |