prot_D-herbacea_F_contig111.936.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-herbacea_F_contig111.936.1
Unique Name	prot_D-herbacea_F_contig111.936.1
Type	polypeptide
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length	190

Homology

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: D7G0Z4_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z4_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 4.420e-85
Identity = 130/189 (68.78%), Postives = 155/189 (82.01%), Query Frame = 0

Query:    1 RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW 189
            R+ GS  L+LRGET V+EHIGRLYT FLNTTSTLDWVRFLVEVEEL    + R         GG+  G VLFQ+YDMPWPVKDREVV++RSVRLDKRAKKMIA+ +ST+HP RP+ +A+VRAIV+RTSWI TSLG SKT+I+FETR DP+G+LP+A+V F+Q KFPRETVAGFV+SA+ V +H AM KW
Sbjct:   81 RVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSR--------RGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVAGFVSSARNVELHPAMTKW 261

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A6H5L2R4_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R4_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.090e-55
Identity = 83/113 (73.45%), Postives = 102/113 (90.27%), Query Frame = 0

Query:   77 MPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW 189
            MPWPVKDREVV++RSVRLDKRAKKMIA+ +ST+HP RP+ +A+VRAIVHRTSW+ TSLGGSKT+I+FETR DP+G+LP+A++ FMQ KFPRETVAGFV+SA+ V +H AM KW
Sbjct:    1 MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMIGFMQVKFPRETVAGFVSSARNVELHPAMTKW 113

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A328C4Z6_9DELT (START domain-containing protein n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C4Z6_9DELT)

HSP 1 Score: 95.1 bits (235), Expect = 8.120e-21
Identity = 60/191 (31.41%), Postives = 98/191 (51.31%), Query Frame = 0

Query:    1 RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 189
            ++ GS + + RGE V + HIG+L T F +      WV    E   L           G+LS          + R+ +P+P+KDR+ VLQ   RLD+  +  +A+ +S +   RP N   VRA+ + T + F +L G +T +  E   DP+G LP  +V+ +Q+ +P +T+ G +  AK    P++  +A W
Sbjct:   43 QVEGSSVFAFRGEIVADVHIGKLLTVFADGNQRRHWVDRYDEHGTLER---------GELSE-------RYWIRFGLPFPIKDRDYVLQTEGRLDQANQVFVASIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPDWLVNRIQRDWPSKTLGGLIRQAKKGDQPLYGPVADW 217

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A5C6UNU6_9DELT (START domain-containing protein n=6 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6UNU6_9DELT)

HSP 1 Score: 94.4 bits (233), Expect = 2.060e-20
Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 0

Query:    1 RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 189
            ++ GS + + RGE V + HIG++ T F +      WV    E   L           G+LS          + R+ +P+P+KDR+ VLQ + RL++  +  IAT +S +   RP N   VRA+ + T + F +L G +T +  E   DP+G LP  +V+ +Q+ +P +T+ G +  AK    P++  +A W
Sbjct:   55 QVEGSSVFAFRGEIVADVHIGKILTVFADGDQRRHWVDRYDEHGTLDR---------GELSE-------RYWIRFGLPFPIKDRDYVLQTNGRLNQDDQVFIATIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPNWLVNRIQRDWPSKTLGGLIRQAKKGDQPLYGPVADW 229

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A2E7UXM6_9DELT (START domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UXM6_9DELT)

HSP 1 Score: 94.0 bits (232), Expect = 4.600e-20
Identity = 62/194 (31.96%), Postives = 97/194 (50.00%), Query Frame = 0

Query:    2 IPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSV-RLDKRAKKMIATCKSTEHPDRPVNTAS---VRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKG--VPVHSAMAKW 189
            + G  + + RG T VN  +  L + +++ +    WV  L E E + ++  +                 +++QR+DMPWPV DRE +LQ +V R D+R  K+     ST  P  P  T     VR ++  +SW FT L  S+T +D    ADP GA P  +++ +Q+ FP  T++ F   A+   VP+ S  A W
Sbjct:   81 VEGERVEATRGVTTVNVPLCELISFYVDPSLATTWVDMLTEYEVIELNARQS----------------IVWQRFDMPWPVADREFLLQVNVTRPDERTVKVSLV--STTDPRFPPPTDGDGLVRGVMSPSSWTFTRLSESRTKVDMVGHADPSGAFPAWLINIIQQTFPYNTLSAFAREAENGKVPLRSECADW 256

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A4D9CVN7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVN7_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.740e-19
Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 0

Query:    6 GLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW 189
            G +SLRG+  V+ HI  + T FLNT+ + +WV +L   EEL                 G +   +++Q +DMP P+ DRE +++R+V  D+R   + A   S EH  +P   + VR    +T W F + G  +T I  E+  +P+  +   +V  MQ  + R ++   +   K    H +   W
Sbjct:  160 GTISLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPT---------------GQENAHIIYQFFDMPLPLSDREFLMRRTVVSDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFVHW 328

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A3C1KYH3_9DELT (START domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1KYH3_9DELT)

HSP 1 Score: 82.4 bits (202), Expect = 1.120e-15
Identity = 55/191 (28.80%), Postives = 85/191 (44.50%), Query Frame = 0

Query:    2 IPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSL-GGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 189
            + GS + + +G    N H  R+   F  +     WV      ++L V  +K   +               + R+ +PWPV DR+ VL     LD + + M A  +S   P     +  VR  V  T + F +L G  KT +  E + DPRG LP  +V+ +QKK+P +T+ G V +AK   +  H     W
Sbjct:   60 VKGSNMFAFKGVMTANVHFARVARVFSTSKLRRTWVDRWAADKDLKVHNSKERTY---------------YIRFGLPWPVSDRDYVLNTKATLDVKRRIMTARIRSVNFPGYGPKSCCVRGKVVGTFYKFEALPGAEKTRLTVEVQTDPRGLLPAWLVNLIQKKWPYKTLTGLVRAAKKPNIQNHPDYVDW 235

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A2E7CH35_9PROT (START domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2E7CH35_9PROT)

HSP 1 Score: 79.7 bits (195), Expect = 4.430e-15
Identity = 52/188 (27.66%), Postives = 84/188 (44.68%), Query Frame = 0

Query:    5 SGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEEL-SVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVHSAMAKW 189
            S L + RGE  V+ H   L    L+     +WV  +   + L S+++N                  +L Q YD+PWP++DR+ +L + ++ D   K +     S   P  P N   +RA   RT W F++L    T +  E   DP+G+LP  +V+ +QK +P  ++      AK   +P       W
Sbjct:   35 SPLFAFRGEANVDVHTSVLLGLLLDDPKGAEWVDLMNFSKRLKSINSNTH----------------ILHQSYDLPWPIQDRDYLLNQEIQYDHSNKVVTIEFHSIIDPILPENECCIRAYATRTYWKFSALPNGSTDVVVEVLTDPKGSLPAWLVNLIQKDWPYNSIHNLSERAKKGDIPKEEVTKDW 206

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A2E8HZ83_9PROT (START domain-containing protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E8HZ83_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 3.210e-14
Identity = 46/186 (24.73%), Postives = 89/186 (47.85%), Query Frame = 0

Query:    2 IPGSGLLSLRGETVVNEHIGRLYTTFL--NTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGFVTSAK--GVPVH 183
            +P S L   +GE ++N  + ++    +  +T + L W   L +        ++                 V +  +D+PWP+ DR+ VL+  + +D +  +++    S +H   P  T  VRA++ ++S++F    G KT +  +   DP+G LP+ +V+ +QK +P +T++     A   G P H
Sbjct:   39 VPDSPLKQFKGEMLMNAPLSKVAHVLIKSDTETRLRWTSRLFKFSVFEEEADRL----------------VYYTAFDLPWPIADRDYVLEGKLNIDNKNNRVVVDIASVKHAKAPP-TVGVRAVIDKSSYVFEPRPGGKTFVTVDISTDPKGLLPSWLVNAIQKGWPTKTLSAMEVEAMKPGTPHH 207

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BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Match: A0A7V4G0G2_9DELT (START domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4G0G2_9DELT)

HSP 1 Score: 77.4 bits (189), Expect = 6.180e-14
Identity = 52/193 (26.94%), Postives = 96/193 (49.74%), Query Frame = 0

Query:    2 IPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVSTNKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKKMIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPRGALPTAIVSFMQKKFPRETVAGF------VTSAKGVPVHSAMAK 188
            +PGS LL++RG   VN  +  + +  ++TT   +W+  +VE   + +S N   Y              + ++R  +P+P+ DR+ V++  V +D   K+++   +ST+HP  PV T  VR  V  +++   ++   +T +  E   DP+G++P  +V+ +QK +   T+ G       VT      +  AM K
Sbjct:   62 VPGSPLLAIRGVADVNGSLLHVASVLMDTTRITEWMDRVVEARRIHMS-NPLHY--------------IEYERASVPFPLTDRDFVVESWVEVDAAHKRVLLRSRSTQHPSAPV-TKLVRGEVISSAFTLYAIDAHRTRVMGEVHMDPKGSIPKWLVNLVQKGWAHTTITGLRRQVARVTGPDNPDLEDAMRK 238

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig111.936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0Z4_ECTSI	4.420e-85	68.78	START domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L2R4_9PHAE	4.090e-55	73.45	START domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A328C4Z6_9DELT	8.120e-21	31.41	START domain-containing protein n=1 Tax=Lujinxingi...	[more]
A0A5C6UNU6_9DELT	2.060e-20	31.41	START domain-containing protein n=6 Tax=Bradymonad...	[more]
A0A2E7UXM6_9DELT	4.600e-20	31.96	START domain-containing protein n=2 Tax=Deltaprote...	[more]
A0A4D9CVN7_9STRA	2.740e-19	29.35	START domain-containing protein n=2 Tax=Monodopsid...	[more]
A0A3C1KYH3_9DELT	1.120e-15	28.80	START domain-containing protein n=1 Tax=Myxococcal...	[more]
A0A2E7CH35_9PROT	4.430e-15	27.66	START domain-containing protein n=1 Tax=Proteobact...	[more]
A0A2E8HZ83_9PROT	3.210e-14	24.73	START domain-containing protein n=1 Tax=Bdellovibr...	[more]
A0A7V4G0G2_9DELT	6.180e-14	26.94	START domain-containing protein n=1 Tax=Deltaprote...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..180 e-value: 1.7E-22 score: 81.5
IPR002913	START domain	PFAM	PF01852	START	coord: 63..159 e-value: 1.7E-8 score: 34.1
IPR002913	START domain	PROSITE	PS50848	START	coord: 23..159 score: 12.572
None	No IPR available	PANTHER	PTHR19308	PHOSPHATIDYLCHOLINE TRANSFER PROTEIN	coord: 70..160
None	No IPR available	PANTHER	PTHR19308:SF14		coord: 70..160
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 3..178

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig111	contig	D-herbacea_F_contig111:60062..60957 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female	2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-16
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig111.936.1	mRNA_D-herbacea_F_contig111.936.1	Desmarestia herbacea DmunF female	mRNA	D-herbacea_F_contig111 60062..60957 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-herbacea_F_contig111.936.1 ID=prot_D-herbacea_F_contig111.936.1|Name=mRNA_D-herbacea_F_contig111.936.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=190bp
RIPGSGLLSLRGETVVNEHIGRLYTTFLNTTSTLDWVRFLVEVEELSVST
NKRGYFGGKLSSGGADGGGVLFQRYDMPWPVKDREVVLQRSVRLDKRAKK
MIATCKSTEHPDRPVNTASVRAIVHRTSWIFTSLGGSKTAIDFETRADPR
GALPTAIVSFMQKKFPRETVAGFVTSAKGVPVHSAMAKW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002913	START_lipid-bd_dom
IPR023393	START-like_dom_sf