mRNA_D-herbacea_F_contig10.169.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: D7FRF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF5_ECTSI) HSP 1 Score: 293 bits (749), Expect = 5.490e-97 Identity = 146/201 (72.64%), Postives = 176/201 (87.56%), Query Frame = 1
Query: 1 MSNGD--GLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKI--ADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIREALMAS 591
MS+GD GLQQ+ ++VN+F N+ +TLAFREPV+PKAM IPDY Q+VKNPMDLGTV++ +EEGRYE AE+VA D+R IWSNCILYNSP SEFGLLAAGL KKFEER+S++ A+K RD+K +S+PV+ AP+ DEKVRFTYDLYRTTKV+VGQVMEQVDARCPQALKSP++DEVELNVDMLDPLTFR VERL+R++L +
Sbjct: 1 MSSGDSNGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYERAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSEPVNTKAPTLDEKVRFTYDLYRTTKVDVGQVMEQVDARCPQALKSPADDEVELNVDMLDPLTFRFVERLLRQSLQGN 201
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.390e-46 Identity = 83/199 (41.71%), Postives = 130/199 (65.33%), Query Frame = 1
Query: 1 MSNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDAS-APSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREALMAS 591
M+ DG+ M +++NT + R D++ FREPVD + + + DY QV+ PMDL TVK +E Y++ + A+DIR IW+NC YN S+F LA G K+FEER+SK+ K + D + + AP +EK RF++++YR + E+G ++E++DA+CP A+ KS S+DE+E+N+D +DP TF ++R +R+ L S
Sbjct: 1 MTQADGMAAMTKIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDGSDFYNLADGFSKRFEERFSKV------KAENPALDEEELTHAPDLEEKTRFSHNIYRIKQEELGVLVEKLDAKCPDAIDKSTSDDEIEINIDQIDPRTFHDLDRYVRQCLSQS 193
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S2UZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN8_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.530e-41 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 4 SNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIR 573
S DGL QM ++V+ + R D + FREPVD + + I DY Q+VK PMDLGT+K +E G Y E A DIR +W NC++YN S++ LA L KKFE++Y+K+++K V S D P+ +EK+ F +YR + G+V+ +D RCP L DE+E+ VD++DP TF V R ++
Sbjct: 36 SKQDGLTQMKKIVSYLMTRQDAVPFREPVDWRQLQIFDYPQIVKRPMDLGTIKKKLENGEYRTPAECAADIRLVWENCMIYNQDGSDYYRLAEKLSKKFEDKYAKVSNK------EVSSAIDDDKVPTLEEKLLFEQMIYRLRAEQTGEVVLTLDQRCPDCLAKVDGDELEITVDVIDPRTFHDVFRTLQ 219
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: B8BSQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSQ7_THAPS) HSP 1 Score: 147 bits (371), Expect = 1.840e-40 Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 MSNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADK-------GRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTF 549
MSN + Q M +LV+ F ++D FREPVD KA+ + DY VVK PMDLG VK + E +Y++ + A+D+R IW NC+ YN+ S+F LLA + KKFEE+++K+ ++ G DK D P+P++K F LY+ TK E+G V+ +DA+CP+AL K+ +EDEVE+NVD++ P F
Sbjct: 1 MSNPE--QAMSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNADGSDFYLLAQTMAKKFEEKFAKLVEQFGEAAGDGGDKNGED-----DYEDPTPEDKRTFAKLLYKITKEELGNVITDLDAKCPKALVKNSAEDEVEINVDVISPKIF 184
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S2PE54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE54_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.850e-40 Identity = 86/222 (38.74%), Postives = 132/222 (59.46%), Query Frame = 1
Query: 4 SNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIA---DKGRDKKAHVRS--DPVDASA-----------------PSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALK----SPSEDEVELNVDMLDPLTFRVVERLIREALMAS 591
S + L++M +LV++ + +SDT FREPV+ + + + DY +++K PMDLGTVK +E +YE A E A DIR IWSNC+ YN S+F LLA L +KFE+R+ K+ D G D + +S D SA P+ +EK +F ++++ +G VM+ +D RCPQA++ +EDE+E+NVD LDP TF ++R I++ L+ +
Sbjct: 9 SKQEALRKMSKLVSSMMTKSDTAPFREPVNWRELELWDYPKIIKRPMDLGTVKRKLESTQYETANECAEDIRLIWSNCMTYNQEGSDFYLLAQALSRKFEDRFRKVRAEYDVGGDAYDNTKSKSDGKGGSAENGSGSAAGGKMGDHKPPTLEEKTQFAGNIFKIGGDALGYVMQVIDLRCPQAIERGNNGAAEDELEINVDTLDPRTFAELDRFIQDKLLVN 230
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.030e-40 Identity = 70/190 (36.84%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 19 LQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREALM 585
++ M ++V+ + R D + F EPVD + + + DY +++K PMDLGTVK +EE Y + A DIR +WSNC YN S+F LA L K+FE++++K+ K + APS +EK +F++ +Y+ + E+GQ++E+++ RCP+A+ K+P++DE+E+N+D +DP TFR +++ ++ ++
Sbjct: 1 MEAMKKIVDKLMKRQDAVPFLEPVDWQGLGLVDYPKMIKKPMDLGTVKKKIEENEYASVHACAEDIRLVWSNCKKYNQDGSDFFNLAESLSKRFEDQFAKV------KAEDPMIEDDTEHAPSLEEKTKFSHMIYKIKQEELGQLVEKLEDRCPEAIDKTPNDDELEINIDAIDPKTFRELDKFVKACIV 184
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S1XM82_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM82_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.040e-38 Identity = 72/180 (40.00%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 49 FLNRS-DTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREAL 582
FL++ + F EPVD K M + DY Q++K+PMDLGTV+ + Y A E A DIR +W NC+ YN S+F +A KKFE +++ +A KA R D P+ DE++ F+++L+ E+GQ+++++D CP+ L K P EDE+E+NVD +D TFR V+R +++ L
Sbjct: 18 FLDKQQEAYIFAEPVDWKGMGLFDYPQIIKHPMDLGTVRQKLNNKEYRTASECAEDIRLVWRNCMTYNQDGSDFYKIAERFSKKFETKFAPVA------KAEARESVEDERPPTTDERIVFSHNLFNIRMQELGQLIQKLDGLCPECLEKKPDEDEIEINVDAIDAATFRNVDRFVKDCL 191
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7R9UFP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFP7_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.940e-38 Identity = 72/196 (36.73%), Postives = 120/196 (61.22%), Query Frame = 1
Query: 1 MSNGDG-LQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREAL 582
MS G G ++ M+ +++ ++++ F EPV+ + M + DY +++KNPMDLGTV+ + Y NA E A DIR +W NC+ YN SEF +A KKFE +++ +A K+ + + + P+ DE++ F+++L+ E+G V++++D CP L K P + E+ELNVD +DP +FR V+R ++E L
Sbjct: 1 MSKGLGWIKSMMGVLDFLDKQTESYIFSEPVNWREMGLYDYPEIIKNPMDLGTVRQKLVNKEYRNATECAEDIRLVWRNCMTYNQDGSEFYKIAEKFSKKFESKFAPVA------KSEAKESEEEDAPPTTDERIVFSHNLFNLRMQELGNVIQKLDQMCPDCLEKKPDDGEIELNVDAIDPASFREVDRYVKECL 190
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: D6PJ37_9ZZZZ (Predicted protein n=1 Tax=uncultured organism MedDCM-OCT-S04-C2 TaxID=743613 RepID=D6PJ37_9ZZZZ) HSP 1 Score: 139 bits (349), Expect = 3.930e-37 Identity = 71/189 (37.57%), Postives = 115/189 (60.85%), Query Frame = 1
Query: 19 LQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIREALM 585
+ QML++V++ + R ++L FREPVD KA+ + DY Q+VK PMDLGTVK N+E+ Y++ EE AND+R +W+NC+LYN SE+ LA K FE+ Y + ++ HV D P+ + +++ ++D+++ VE+ +V+ ++ CP AL DEV +N D L TF V + + ++
Sbjct: 12 MDQMLKIVSSTIARRESLIFREPVDWKALGLTDYIQIVKTPMDLGTVKKNIEKNVYKDIEECANDVRLVWTNCMLYNRDGSEYYHLADKFSKAFEDAYGAL------RRLHVTDDEDPHKTPTVEARIQLSHDIFKIDNVEMARVLTIIEEDCPSALVRKV-DEVMINFDALASETFNKVNKFVLNVMV 193
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S0UGI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGI7_9STRA) HSP 1 Score: 138 bits (347), Expect = 6.450e-37 Identity = 76/184 (41.30%), Postives = 115/184 (62.50%), Query Frame = 1
Query: 28 MLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDA--SAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLI 570
M +++ + + RSDT FR PVD K M + DY ++K PMDLG+VK N+ +Y++ E A DIR +W+NC+ YN S+F LLA L KKFEE+YSK+ + D + V+S+ + + + DEK F LY +K ++G+++ +VD +CP AL K+ EDE ELNVD + P F ++ +
Sbjct: 12 MSKVLQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGSVKRNINARKYKSIPEAAEDIRLVWTNCMTYNQDGSDFFLLAKNLSKKFEEKYSKLVN---DLQLDVKSESLSSISGVVTLDEKRSFAKSLYTLSKEDLGKLIVEVDHKCPAALTKNMGEDEAELNVDKIPPALFAELKTFV 192 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig10.169.1 >prot_D-herbacea_F_contig10.169.1 ID=prot_D-herbacea_F_contig10.169.1|Name=mRNA_D-herbacea_F_contig10.169.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=240bp MSNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLback to top mRNA from alignment at D-herbacea_F_contig10:1032806..1042751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig10.169.1 ID=mRNA_D-herbacea_F_contig10.169.1|Name=mRNA_D-herbacea_F_contig10.169.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=9946bp|location=Sequence derived from alignment at D-herbacea_F_contig10:1032806..1042751- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig10:1032806..1042751- >mRNA_D-herbacea_F_contig10.169.1 ID=mRNA_D-herbacea_F_contig10.169.1|Name=mRNA_D-herbacea_F_contig10.169.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1440bp|location=Sequence derived from alignment at D-herbacea_F_contig10:1032806..1042751- (Desmarestia herbacea DmunF female)back to top |