prot_D-herbacea_F_contig10.169.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig10.169.1
Unique Nameprot_D-herbacea_F_contig10.169.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length240
Homology
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: D7FRF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF5_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 5.490e-97
Identity = 146/201 (72.64%), Postives = 176/201 (87.56%), Query Frame = 0
Query:    1 MSNGD--GLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKI--ADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIREALMAS 197
            MS+GD  GLQQ+ ++VN+F N+ +TLAFREPV+PKAM IPDY Q+VKNPMDLGTV++ +EEGRYE AE+VA D+R IWSNCILYNSP SEFGLLAAGL KKFEER+S++  A+K RD+K   +S+PV+  AP+ DEKVRFTYDLYRTTKV+VGQVMEQVDARCPQALKSP++DEVELNVDMLDPLTFR VERL+R++L  +
Sbjct:    1 MSSGDSNGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYERAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSEPVNTKAPTLDEKVRFTYDLYRTTKVDVGQVMEQVDARCPQALKSPADDEVELNVDMLDPLTFRFVERLLRQSLQGN 201          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.390e-46
Identity = 83/199 (41.71%), Postives = 130/199 (65.33%), Query Frame = 0
Query:    1 MSNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDAS-APSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREALMAS 197
            M+  DG+  M +++NT + R D++ FREPVD + + + DY QV+  PMDL TVK  +E   Y++  + A+DIR IW+NC  YN   S+F  LA G  K+FEER+SK+      K  +   D  + + AP  +EK RF++++YR  + E+G ++E++DA+CP A+ KS S+DE+E+N+D +DP TF  ++R +R+ L  S
Sbjct:    1 MTQADGMAAMTKIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDGSDFYNLADGFSKRFEERFSKV------KAENPALDEEELTHAPDLEEKTRFSHNIYRIKQEELGVLVEKLDAKCPDAIDKSTSDDEIEINIDQIDPRTFHDLDRYVRQCLSQS 193          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S2UZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.530e-41
Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 0
Query:    2 SNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIR 191
            S  DGL QM ++V+  + R D + FREPVD + + I DY Q+VK PMDLGT+K  +E G Y    E A DIR +W NC++YN   S++  LA  L KKFE++Y+K+++K       V S   D   P+ +EK+ F   +YR    + G+V+  +D RCP  L     DE+E+ VD++DP TF  V R ++
Sbjct:   36 SKQDGLTQMKKIVSYLMTRQDAVPFREPVDWRQLQIFDYPQIVKRPMDLGTIKKKLENGEYRTPAECAADIRLVWENCMIYNQDGSDYYRLAEKLSKKFEDKYAKVSNK------EVSSAIDDDKVPTLEEKLLFEQMIYRLRAEQTGEVVLTLDQRCPDCLAKVDGDELEITVDVIDPRTFHDVFRTLQ 219          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: B8BSQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSQ7_THAPS)

HSP 1 Score: 147 bits (371), Expect = 1.840e-40
Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 0
Query:    1 MSNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADK-------GRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTF 183
            MSN +  Q M +LV+ F  ++D   FREPVD KA+ + DY  VVK PMDLG VK  + E +Y++  + A+D+R IW NC+ YN+  S+F LLA  + KKFEE+++K+ ++       G DK         D   P+P++K  F   LY+ TK E+G V+  +DA+CP+AL K+ +EDEVE+NVD++ P  F
Sbjct:    1 MSNPE--QAMSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNADGSDFYLLAQTMAKKFEEKFAKLVEQFGEAAGDGGDKNGED-----DYEDPTPEDKRTFAKLLYKITKEELGNVITDLDAKCPKALVKNSAEDEVEINVDVISPKIF 184          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S2PE54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE54_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.850e-40
Identity = 86/222 (38.74%), Postives = 132/222 (59.46%), Query Frame = 0
Query:    2 SNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIA---DKGRDKKAHVRS--DPVDASA-----------------PSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALK----SPSEDEVELNVDMLDPLTFRVVERLIREALMAS 197
            S  + L++M +LV++ + +SDT  FREPV+ + + + DY +++K PMDLGTVK  +E  +YE A E A DIR IWSNC+ YN   S+F LLA  L +KFE+R+ K+    D G D   + +S  D    SA                 P+ +EK +F  ++++     +G VM+ +D RCPQA++      +EDE+E+NVD LDP TF  ++R I++ L+ +
Sbjct:    9 SKQEALRKMSKLVSSMMTKSDTAPFREPVNWRELELWDYPKIIKRPMDLGTVKRKLESTQYETANECAEDIRLIWSNCMTYNQEGSDFYLLAQALSRKFEDRFRKVRAEYDVGGDAYDNTKSKSDGKGGSAENGSGSAAGGKMGDHKPPTLEEKTQFAGNIFKIGGDALGYVMQVIDLRCPQAIERGNNGAAEDELEINVDTLDPRTFAELDRFIQDKLLVN 230          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.030e-40
Identity = 70/190 (36.84%), Postives = 123/190 (64.74%), Query Frame = 0
Query:    7 LQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREALM 195
            ++ M ++V+  + R D + F EPVD + + + DY +++K PMDLGTVK  +EE  Y +    A DIR +WSNC  YN   S+F  LA  L K+FE++++K+      K      +     APS +EK +F++ +Y+  + E+GQ++E+++ RCP+A+ K+P++DE+E+N+D +DP TFR +++ ++  ++
Sbjct:    1 MEAMKKIVDKLMKRQDAVPFLEPVDWQGLGLVDYPKMIKKPMDLGTVKKKIEENEYASVHACAEDIRLVWSNCKKYNQDGSDFFNLAESLSKRFEDQFAKV------KAEDPMIEDDTEHAPSLEEKTKFSHMIYKIKQEELGQLVEKLEDRCPEAIDKTPNDDELEINIDAIDPKTFRELDKFVKACIV 184          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S1XM82_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM82_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.040e-38
Identity = 72/180 (40.00%), Postives = 110/180 (61.11%), Query Frame = 0
Query:   17 FLNRS-DTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREAL 194
            FL++  +   F EPVD K M + DY Q++K+PMDLGTV+  +    Y  A E A DIR +W NC+ YN   S+F  +A    KKFE +++ +A      KA  R    D   P+ DE++ F+++L+     E+GQ+++++D  CP+ L K P EDE+E+NVD +D  TFR V+R +++ L
Sbjct:   18 FLDKQQEAYIFAEPVDWKGMGLFDYPQIIKHPMDLGTVRQKLNNKEYRTASECAEDIRLVWRNCMTYNQDGSDFYKIAERFSKKFETKFAPVA------KAEARESVEDERPPTTDERIVFSHNLFNIRMQELGQLIQKLDGLCPECLEKKPDEDEIEINVDAIDAATFRNVDRFVKDCL 191          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7R9UFP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFP7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.940e-38
Identity = 72/196 (36.73%), Postives = 120/196 (61.22%), Query Frame = 0
Query:    1 MSNGDG-LQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLIREAL 194
            MS G G ++ M+ +++    ++++  F EPV+ + M + DY +++KNPMDLGTV+  +    Y NA E A DIR +W NC+ YN   SEF  +A    KKFE +++ +A      K+  +    + + P+ DE++ F+++L+     E+G V++++D  CP  L K P + E+ELNVD +DP +FR V+R ++E L
Sbjct:    1 MSKGLGWIKSMMGVLDFLDKQTESYIFSEPVNWREMGLYDYPEIIKNPMDLGTVRQKLVNKEYRNATECAEDIRLVWRNCMTYNQDGSEFYKIAEKFSKKFESKFAPVA------KSEAKESEEEDAPPTTDERIVFSHNLFNLRMQELGNVIQKLDQMCPDCLEKKPDDGEIELNVDAIDPASFREVDRYVKECL 190          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: D6PJ37_9ZZZZ (Predicted protein n=1 Tax=uncultured organism MedDCM-OCT-S04-C2 TaxID=743613 RepID=D6PJ37_9ZZZZ)

HSP 1 Score: 139 bits (349), Expect = 3.930e-37
Identity = 71/189 (37.57%), Postives = 115/189 (60.85%), Query Frame = 0
Query:    7 LQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIREALM 195
            + QML++V++ + R ++L FREPVD KA+ + DY Q+VK PMDLGTVK N+E+  Y++ EE AND+R +W+NC+LYN   SE+  LA    K FE+ Y  +      ++ HV  D      P+ + +++ ++D+++   VE+ +V+  ++  CP AL     DEV +N D L   TF  V + +   ++
Sbjct:   12 MDQMLKIVSSTIARRESLIFREPVDWKALGLTDYIQIVKTPMDLGTVKKNIEKNVYKDIEECANDVRLVWTNCMLYNRDGSEYYHLADKFSKAFEDAYGAL------RRLHVTDDEDPHKTPTVEARIQLSHDIFKIDNVEMARVLTIIEEDCPSALVRKV-DEVMINFDALASETFNKVNKFVLNVMV 193          
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Match: A0A7S0UGI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGI7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.450e-37
Identity = 76/184 (41.30%), Postives = 115/184 (62.50%), Query Frame = 0
Query:   10 MLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDLGTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKFEERYSKIADKGRDKKAHVRSDPVDA--SAPSPDEKVRFTYDLYRTTKVEVGQVMEQVDARCPQAL-KSPSEDEVELNVDMLDPLTFRVVERLI 190
            M +++ + + RSDT  FR PVD K M + DY  ++K PMDLG+VK N+   +Y++  E A DIR +W+NC+ YN   S+F LLA  L KKFEE+YSK+ +   D +  V+S+ + +     + DEK  F   LY  +K ++G+++ +VD +CP AL K+  EDE ELNVD + P  F  ++  +
Sbjct:   12 MSKVLQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGSVKRNINARKYKSIPEAAEDIRLVWTNCMTYNQDGSDFFLLAKNLSKKFEEKYSKLVN---DLQLDVKSESLSSISGVVTLDEKRSFAKSLYTLSKEDLGKLIVEVDHKCPAALTKNMGEDEAELNVDKIPPALFAELKTFV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF5_ECTSI5.490e-9772.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2WSU6_9STRA3.390e-4641.71Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2UZN8_9STRA1.530e-4141.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BSQ7_THAPS1.840e-4043.46Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PE54_9STRA4.850e-4038.74Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3JU45_9STRA5.030e-4036.84Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S1XM82_9STRA3.040e-3840.00Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UFP7_9STRA3.940e-3836.73Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D6PJ37_9ZZZZ3.930e-3737.57Predicted protein n=1 Tax=uncultured organism MedD... [more]
A0A7S0UGI7_9STRA6.450e-3741.30Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 71..90
score: 34.46
coord: 37..53
score: 50.51
coord: 21..34
score: 32.14
coord: 53..71
score: 24.94
IPR001487BromodomainSMARTSM00297bromo_6coord: 3..109
e-value: 6.3E-31
score: 118.8
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 11..89
e-value: 6.0E-20
score: 71.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 18..90
score: 19.426
IPR027353NET domainPFAMPF17035BETcoord: 129..191
e-value: 6.3E-6
score: 26.3
IPR027353NET domainPROSITEPS51525NETcoord: 118..201
score: 13.769
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 2..125
e-value: 4.1E-35
score: 122.6
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 8..110
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 11..107
coord: 120..226
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING 2A-RELATEDcoord: 11..107
coord: 120..226
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 23..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:1032806..1042751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.169.1mRNA_D-herbacea_F_contig10.169.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig10 1032806..1042751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig10.169.1 ID=prot_D-herbacea_F_contig10.169.1|Name=mRNA_D-herbacea_F_contig10.169.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=240bp
MSNGDGLQQMLRLVNTFLNRSDTLAFREPVDPKAMNIPDYFQVVKNPMDL
GTVKSNMEEGRYENAEEVANDIRSIWSNCILYNSPDSEFGLLAAGLRKKF
EERYSKIADKGRDKKAHVRSDPVDASAPSPDEKVRFTYDLYRTTKVEVGQ
VMEQVDARCPQALKSPSEDEVELNVDMLDPLTFRVVERLIREALMASTVN
TVTVPATSSSSSVKSKSSSSGHKKRRGSEGETRLKKQRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018359Bromodomain_CS
IPR036427Bromodomain-like_sf
IPR027353NET_dom
IPR001487Bromodomain