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Homology
BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Match: A0A6H5KVY2_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY2_9PHAE) HSP 1 Score: 213 bits (543), Expect = 9.390e-58 Identity = 184/406 (45.32%), Postives = 212/406 (52.22%), Query Frame = 1
Query: 115 EMQARLESMQHKFGSHLAFLVTEFTKMEAHLSPEVEAGGPKTDDASEEEEDGPQQALARLRFFITHVKNTRERMEQARSGLHHYTCSQLDMLEEHITQRLLPVKDRMLAQLARESERMEKSNNAAATEV----------------ASSYLTSSSG-----TAVSDDWMDSSDG------------MLNDGASSTEAIPGGDYSGLTSSSSSMARPCSSLSLADLGDLCGDEDADDDCGGAFLVG-RDCD--VGGSGIVLDLYGLGQG-KDSFLPLSRDRSTERSASISTLSSVS-AMTDGE-FSGDALSVDADCSAGGG-------------------------------EGHP--------GAASSATLKGG-----SGIDQEMGELSELFAPDAFLLSTVLDTE 1083
EM++RL +MQ +FG+ L FLVTEFTK+EA LS +E G T A+ +E+ PQQ L RLRFFI HVK T +RM+QAR GLHHYT QLDMLEEHIT RLLPVK RMLAQLA+ + +L G TAVSD W+ S + T+SS+S+ R CSSLS ADLGDLCGD++ GG FLVG DCD V GSGI LDLY LGQG KD FLP + R+ R +SIST SS S A TD E S D+LS+DADCS G E P GA GG SGIDQEM ELSELFAPDAFL+STVLDTE
Sbjct: 99 EMRSRLTTMQDRFGAQLHFLVTEFTKLEAQLS--LEWTGSTT--AAVGDENSPQQQLGRLRFFIEHVKRTTDRMDQARRGLHHYTSEQLDMLEEHITHRLLPVKKRMLAQLAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLFLGGIGGGKDGATAVSDGWVVGSPSPPLXXXXXXXXXXXXXXRVNISTCDSDRQLSATTSSASLPRACSSLSFADLGDLCGDQEG----GGVFLVGGEDCDDDVHGSGIGLDLYDLGQGGKDPFLPEGQQRAG-RWSSISTRSSYSTASTDEEELSDDSLSIDADCSGSSGTPCSPSALGSGESSLLAAAAAATRATKAVITEARPDGSACVEAGAVPEGVAAGGASASKSGIDQEMRELSELFAPDAFLMSTVLDTE 495
BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Match: D7FUA8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA8_ECTSI) HSP 1 Score: 120 bits (302), Expect = 6.390e-26 Identity = 105/208 (50.48%), Postives = 115/208 (55.29%), Query Frame = 1
Query: 610 GGDYSGLTSSSSSMARPCSSLSLADLGDLCGDEDADDDCGGAFLVG-RDCD--VGGSGIVLDLYGLGQG-KDSFLPLSRDRSTERSASISTLSSVS-AMTDGE-FSGDALSVDADCSAGGG-------------------------------EGHP--------GAASSATLKGG-----SGIDQEMGELSELFAPDAFLLSTVLDTE 1083
GG SG T+SS+S+ R CSSLS ADLGDLCGD++ D FLVG DCD GSGI LDLY LGQG KD FLP + R+ R +SIST SS S A TDGE S D+LSVDADCS E P GA GG SGIDQEMGELSELFAPDAFL+STVLDTE
Sbjct: 97 GGQLSG-TTSSASLPRACSSLSFADLGDLCGDQEGGD----VFLVGGEDCDDDAHGSGIGLDLYDLGQGGKDPFLPEGQQRAG-RWSSISTRSSSSTASTDGEELSDDSLSVDADCSGSSSTPCSPXXVXXXXXXXXXXXXXXXXXAKAIKTEARPDGSAGLEAGAVQQGVAAGGASATKSGIDQEMGELSELFAPDAFLMSTVLDTE 298
BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Match: A0A835YXC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC4_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 8.050e-5 Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 253 EEEEDGPQQALARLRFFITHVKNTRERMEQAR--SGLHHYTCSQLDMLEEHITQRLLPVKDRMLAQLA 450
++E+ Q LAR+R+F+ +V T +R+ G+ Y QL +LE+HIT +LPV+DR+LAQ+A
Sbjct: 20 DDEDSAAHQTLARMRYFLANVSGTMDRLSGGPPPKGVKPYDMHQLGLLEKHITDNILPVRDRLLAQMA 87
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 120.2 |
| Seed ortholog evalue | 2.3e-24 |
| Seed eggNOG ortholog | 2880.D7FUA8 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | TAZ zinc finger |
| EggNOG OGs | 2BJCE@1,2S1FW@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 1228 |
| Cds size | 1224 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927396.8159068-CDS-D-herbacea_F_contig1:2812828..2813248 | 1622927396.8159068-CDS-D-herbacea_F_contig1:2812828..2813248 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2812829..2813248 - |
| 1690790146.860076-CDS-D-herbacea_F_contig1:2812828..2813248 | 1690790146.860076-CDS-D-herbacea_F_contig1:2812828..2813248 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2812829..2813248 - |
| 1622927396.8260052-CDS-D-herbacea_F_contig1:2815557..2815761 | 1622927396.8260052-CDS-D-herbacea_F_contig1:2815557..2815761 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2815558..2815761 - |
| 1690790146.8714595-CDS-D-herbacea_F_contig1:2815557..2815761 | 1690790146.8714595-CDS-D-herbacea_F_contig1:2815557..2815761 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2815558..2815761 - |
| 1622927396.8371818-CDS-D-herbacea_F_contig1:2817489..2817696 | 1622927396.8371818-CDS-D-herbacea_F_contig1:2817489..2817696 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2817490..2817696 - |
| 1690790146.879732-CDS-D-herbacea_F_contig1:2817489..2817696 | 1690790146.879732-CDS-D-herbacea_F_contig1:2817489..2817696 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2817490..2817696 - |
| 1622927396.845422-CDS-D-herbacea_F_contig1:2824715..2824874 | 1622927396.845422-CDS-D-herbacea_F_contig1:2824715..2824874 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2824716..2824874 - |
| 1690790146.9005356-CDS-D-herbacea_F_contig1:2824715..2824874 | 1690790146.9005356-CDS-D-herbacea_F_contig1:2824715..2824874 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2824716..2824874 - |
| 1622927396.8573935-CDS-D-herbacea_F_contig1:2826292..2826526 | 1622927396.8573935-CDS-D-herbacea_F_contig1:2826292..2826526 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2826293..2826526 - |
| 1690790146.9118733-CDS-D-herbacea_F_contig1:2826292..2826526 | 1690790146.9118733-CDS-D-herbacea_F_contig1:2826292..2826526 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2826293..2826526 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1.111.1 >prot_D-herbacea_F_contig1.111.1 ID=prot_D-herbacea_F_contig1.111.1|Name=mRNA_D-herbacea_F_contig1.111.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=408bp
KRASRSRKAAGASIGTAAATASAKSPPFKAVQELQPSPEMQARLESMQHK
FGSHLAFLVTEFTKMEAHLSPEVEAGGPKTDDASEEEEDGPQQALARLRF
FITHVKNTRERMEQARSGLHHYTCSQLDMLEEHITQRLLPVKDRMLAQLA
RESERMEKSNNAAATEVASSYLTSSSGTAVSDDWMDSSDGMLNDGASSTE
AIPGGDYSGLTSSSSSMARPCSSLSLADLGDLCGDEDADDDCGGAFLVGR
DCDVGGSGIVLDLYGLGQGKDSFLPLSRDRSTERSASISTLSSVSAMTDG
EFSGDALSVDADCSAGGGEGHPGAASSATLKGGSGIDQEMGELSELFAPD
AFLLSTVLDTEEMEVTAEEMAVSETAAAVAAPVQVDANAEERGVKKADGS
MAASTVAD back to topmRNA from alignment at D-herbacea_F_contig1:2812827..2826526- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig1.111.1 ID=mRNA_D-herbacea_F_contig1.111.1|Name=mRNA_D-herbacea_F_contig1.111.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=13700bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2812827..2826526- (Desmarestia herbacea DmunF female)
AAGCGAGCGTCGAGGTCTCGAAAGGCCGCCGGCGCGAGCATCGGAACGGC
GGCAGCGACAGCCTCTGCCAAGTCTCCGCCCTTCAAGGCCGTCCAAGAGC
TGCAACCCAGCCCCGAAATGCAGGCCAGGCTTGAGAGCATGCAGCACAAG
TTCGGCTCGCACCTGGCCTTCTTGGTAACAGAATTCACCAAGATGGAGGC
GCACTTGTCGCCTGAGGTGGAAGCAGGCGGGCCGGTGAGTTGATCGACAT
TGCCTTTTCGACGCCTGAAAATAAATATATTCGCCACGGCCATCTTACAC
ATGTACAGTACGTGTTTTTCTTCGTAGGGCAATAAATTACGCATATCTCC
GCATTGGCGGTAATACAGACCAACTCAACTCATTTTTTTTTTTTTTTTTC
GGTCCCATTTATTCTTATACATTATGTTCGCTCTGTTCTTTCTCTACTGT
TTATCATCGTAACAAAAAATTGTTTTTTCAAGTGGAAGCGTTGTTTGTTT
GGTTTTCGGGGCCCTCTGCTACGATGCGCTCGCGGGCAATTGTTTTTCAT
GTTTTTTGTACTCGTAGCGGTCAACTTTTGTTCGGGACTGCTATTCAGCC
GGCCCACCCATCCGCCCTTCCTTCGAGGTGGTTCAGAAGTATGTGGTGTT
GAGGACATGCATGTGGAGAGTTGTGCGTGCTGGCATCATATACATCAGAC
TATGATACAACTGGCTGTTGTTGTCATGTATCATGCATTTGTGTACTACA
GCAGGGTTCTACTACTACTGTACTGTTGTCTGTTGTTTCTGTCGAATGAT
GGGGTACAGTCAGTAGTATGGACTGCTGTTCAGCCGGCCCCACCCACCCA
TCCGGCCTTCGACGAGGTTCAGAATGTATGTGGTGTTGAGGACATGCATG
TTGAGAGTTGTGCGTGCTGGCATCATATACATACTATGATATAACTGACT
GTTATGTAATTGTGTACGACAGCAGGGTACTGCTATCACAGAGGCCCATA
ACAAATTGGGCCAAAACAGGGTGAACAAGGGGGAGCAAACAGCCTTCCCG
ACCCGCCCCCGCCTCCCCGAAGGTTGAAAACGTACCATCGTTGATAAGTC
TACTGCTGCCGAATGATAAAATCGAACGAGGTCCGCGATTCACGCCGCGT
CTTGTCTCGCGATACACACGTCAATACAGGTGTTTTGGGCCTATTTATTA
AGGGCCCTCGTGACTATTGTCTGTTCGTTTCTGTGGAGTGATAAGGGTAC
AGTATGTTCTTGTTCTTACATGTTCAGACACATATGATACGCTGCAGAGC
ATACGATACGTACGGTGTTGTTACTGCTGTTGGAACATGGATGAAGAAGA
ACTACCACCGCTGCTGCATGCAGTGTATACATCGCTGTGGGTGTACGTGC
CGCAGTTTTACTGTCCGAAGTGCTGCCTATACCCAAACAATGTGGGCATG
ACTACAGCTACACTGCCTGAAATTACTACCTGGTACTGTGTAACACACAG
CGAATCACGGGCAACAGCAGTCAGTTGTGGTCACTGCAAAGGATGTATGG
TACTGCTGATAATTCTAAACAAAAGCTGTGCTTATCTCACGTTGTCATGC
TCTCTCTTGTATCATGTTCCGATGCTATTTATATGCATTTGTCGCGAAAT
AGAAGACGGATGATGCATCGGAGGAGGAAGAGGATGGGCCGCAGCAGGCT
CTGGCTCGGCTGCGATTTTTCATTACTCACGTCAAAAATACCAGGGAGAG
GATGGAGCAGGCCAGGAGTGGTCTGCACCACTACACATGCTCTCAGCTCG
ACATGCTCGAGGTGAGAATAACAGTCCATACAACAGCCAGTACAACAGTC
AGTACAGTTTATAGTTTGTTGCACATTACGTCCTACTGAATTGTGATGCT
ACCGGTGCTGTTGTTCGAGAGTTCGTTTTGTAAGGCAAGAGGGTGCGTCA
TTGATTCGTCCATCACGAGAAATGCGCCCCCATGTACGTATCGTCCACAA
GAGACACGAAACGTGAGGGTCGGTATGGTACTCGCTACACCAGTAGTACA
CGGCAGCACTCTGCCGCCGCTTCGACATCTGGCGCGTTCCGTTCAAAAAT
ATATATATGTATCTTTTTTTTGTATCTGTTTTTTTACGAGCGAAGCGAGT
TTCTTTTTTCCGACGGCGCCAGAAATATATAGCTGAAAGGAGGCTCATTG
CGACAAAAAGAGTATATTATATCGCAGATCTACGACCCGAACAAAGATAA
CAATCCAAGAAATGGTCGAAACATTAAGTTATTTTGTTATTTTTTGTCAA
ACGCACCATGTTCGGCAACAGCACAAGCAAGGATGTAGTTTGTCTTGTCT
GCTGTGTTTGGTGGTAACGCTACGATGTGATACTCCGTGTGTGCTTCGGG
TGTCTTCGACCCCAAAACACCAACGGAACAGAGTCTTTCGCGCAAAAACA
TTTCAGCGCGAAGAAAAAGGGTGGAAACATCCACAAATCGTTGTGTGACT
GACCACTGCTTGCATCGTGTTGGACTTTACGGCCCCCGACGGACGACGTA
AAAAGATGCGTACGGTAAAACACACACACACACACACACACACACACACA
CATCTCTTGCCTCTCTCGGATAAATTTGGCTTTGTTTCACCCTTTAACAT
TTCACTGAGGTAGGGTTTTGTCGTGAGACCTGCGGGATTTTGTCCAGACT
GAAGGATTTTTTTTTTAGATTTTAGGCTTCGGCCTCACGGCGGCCACCAC
CCTCATGCAGAACCAGAACCCTAGCCCCAACCTTGCATGAGAGGACTGTT
GCTTGGTTCATGTGCTCTGGTTGGGGGATGACTATTATACCTGTTCAGGT
AGGTAGCTGTGGTAATCAGCTCGGACATTTTTTTTTTTTTTCCGCGCCGA
AGGCACAGGATTTTACCCGCCGGCCAGTGGTACCACATTATAATTGTGGT
ACGGTTGGGGTTATAGAGTAGGGTGGTGTCGGCCCCCCCTGTCGTCGTAA
AAGCCACACAAGGTAATCAAAATAATCAAGAACCAGAAGGGCGTATCAAC
CATTATTTTTTTTCGTCCAAGTGGCACAGGGGTGTTACGCGTTAGGCAAC
AACTATGGTTTTGACACCACGTTATTTTTGTTGACTGGCAATTCGTGCCG
AGCGGACCCAACGCGGCTCGAACCCTATGACCATGTAGCCATAACCGGCG
CCATCCACCCTCCGCACACAATTGAGGCACAGTACCATAGTTGGCGCGGC
CGAAATCCACGCGTTCGGCGCTGAAATTGAGGAAACATGTTTTTTTTGGT
ATATTTGTGACTTTTTGTGTCCAGCCTGCGAGGTAGGAAATTTCCTGGAA
TGAAGTATTAAATAGTAGGCAGCAAGAGTCAGTAAACTGCCTTTCCTCCT
AGTGTAACCCGCGCGTTGCCGTATCGTACCGGTACATCTACGGTCAGGCC
CGCTACGAATATGATTCCAGCAGTACTACTATTAATAGTACTGTACGGCG
TTGGCTCTTTTATGTTCGGTGTTGGAAAAGTTGCTATTAATATTAATACG
AGTAACTTTTTATCTTTAACCTTGTTCATCATACGGCTTATCATACCATG
TGAATATTTGGGTCGTCCAAGACAGGCTACTTCAATTGCTATGATGGTAG
CGTAACTTCTTACACGACTCTCTTTTGTGAATACGTTGGTCTTTTGAGAT
ATGGCTACTTGAAGTATAATATATTTATCCCTGAGTGTGCGCTCGTACTG
CCTTAGCTCTGTACTACCGTGTTGCCCCCCCCCCCCCTCGGGACCCCCTG
CGTGTCGCTATGGTCAGGCGTATAAGGAAGCGGGGGGGGGGGGGGCGTAG
CTGTAGCCGATGATATGCGTAGATATATATCCCCTTAGAGCTTATTTTTC
TTCTGGTCCCGCTTTTGCTTTGTTGTTGTTTGGGTTTTGTTGTGTTATGA
GTTTATTTCGAGTCTGTGTATTATTATTGTCTCTTGATTGTGAAAGAACC
CGCCCTCCTTGGGCACTGCTGTTTATCCATGTGTCCATGTGTATATTTTG
CTTTTTTTTCTCCTTCTGGAGCTTTATTGGGCCGCTTTTTGTGACCACGG
GTGTAATATTTTGAGATGTGCTATTGTGGCGGAACAACAACAGCAACAAG
TTGTGCTATTAATATCATATTATCATATTGTAATGTATGCAATATAAGCG
TTGTTGTTCATGCACGAAACCAACTAGAGATTAAAGGGGAAAGCGATGTA
AGTCTGTTGCTGAAAGGTCGGAGTACAGGGGAATGAGGGCGGACTTGAAT
ACGATGTGATAACTTCGTTCGCGCGTATGGTGCTATCGTATGCTGCTGTC
GTTCCCAGATAAGTTGGAAGAGTACTACTGTAGCAGTTGCATCCGTATAG
ACTAATACCTTAGGCATCGTATGATACGTAACTTTGCAAAGCGTGCTGTA
ACAGTATGCAACAGCAGCGGAGGGTTCTCGTTGTATTTATATTCAAAAAC
TCGTTTACGAATACTGATTCTACTACTGTATTTTATACTCCTACTACTAC
TGTTGTAGAGGGATCTCGTATTACATACTCGTGTGCTTCGTTTATGTTTT
CGTTTTTATTCTAATATGTATTTTTGTGTCTGCCTATCTGCCTATTCTCG
TAGCCACTGTTATCTCCCAAGTCGTGGATGATATTAAATCAGTGGGGGTG
GATTGAGTTTGTGGAGAGGGGCTGGAGGGGTCGGTTTTATTCGGTTTTGT
TCGGTAAAAAAAAAGTGCCTACCTTTGTGACCACGGGTCCGCGCGATCGG
GCTAATGTGACGGAAATAAATAAATAAAAAAAAATGATGTGATGGATGTT
TTTTATTATTATTATTATTCACAAGGGGTGGCGCAATGGTCTCATGGTTC
GGGTGTTCGCCTCTGCTGAAGGAAGATCGGGGGTTCGATTCCCGGTGGCA
CATTTATGTGCCATCTTCCGTCGCGGAAAACTCGAGATCGTGAGTAAGCG
CAATTCGATGAAAGTCGACAAGAGAAGAAAGTGCTGCACTCTTCCCGCGA
TAAAAATGTATGCACGTACCGTAGTGGGAAGGCCGGAGGAGCGCCTACTA
TGTGACCCCGGATCTGAGTTACGAAGAGAGATGGAGCTAGAGAAAGAATA
GGGCGAAGATAATCAATAGGACGGAAACTAAAAAAGAGAGAGACGTGGGT
ACGCGGGTGACGTGGTCGTGATATGCCTGTTTAAGCGCCTCTGATTTTTG
CCGGTGCTACTATTCGGTAGTCTGTCTGTCGTTACGGCATCTCGACTACT
ACTACGAGTATCTATGCTGACCTTTTGTGGCGTCTGGTCCAATGACCTCT
ATTTGGTCAGCGTGGTCCGCACCATTCTGTGAAAATGCAGAACGAAACAT
AACCGTGTCGCGTATGATACGTATATACGCGTTTGGGCTGTATGCCGTAC
TGATAAGGGCTACGTCGTAACGCTGTGGTCTAAAATTTTAGATTGTCGCC
CGTGCTGGCGGAAGTTCGGAGTTTGATTCCCGGTCAACACAAAATTGCAT
TATACTTGGCCAATGAAACAATGAGTCTTTTTTCCTGCAGAAGTGGTAAG
AGGTAGCCCTGAGTCAGTAAAGCGCTTCGCACGTTGCCACTTTTTTGGTT
TGTTGTTGTTTTTTATTTTTTTATGATCTTCTTTCGAGTCTTTGTCTGTG
TCTGTGCTCTTTCTCATGTGTACATTTTTCTTCGTATTCCCATCTGGAGC
GTTATTGTGCAGGGTTTTTGTGCCACGGGCGAGATCTTTTGACATTAGCT
ATAATGTGAGAAACAAAAACTCACAGCAAAAAAATAGTAGTGGTGTTATT
CGTGTTGCGGTCGTAGCCAAGCTTACTCTACCGTTCCAAGTCGTTCCGAC
GTCGGCTAGCTACGCTGCATCAGCTAGCTTGGAAAGTTCCTGTGTTTTTT
TTTATTGGTTCAAAAGTTCGTGAGGTGGCAGTTTTTTGGCAGCTTCCTCT
CACCACGGATTAGGAAGTTGTAAAGTCTAACGGCATTGGGAGGAACAGCT
CCATGTCGTTTTGATAGCTCGGATATTTCGGATGGATCATGATGGGCTGT
TCAGCAGTTCAAATATCATATCACTAGACTATATCTTTAGGTAGAATTTT
CCTAAACTGCTGAACAGCCCACGTTAGTACTCATTATATATCATACATCA
TACATCTCATATAACGTACATCCTAAAGAGCCGGTCTACGAAATGACAAT
GGTTGAGGTGGTTCCAGTAACCCACTGACTCTACGCGTACTGAGTACTGA
CTCAAGCATGCTTTACTTCGGATTTAATGACAACGCTGACGTCACTCGAG
CGCTGCCAGCTCGCGGCCAATCATGTATCTTTTTTGTAGTAAGTCATACG
GAGGAGCCCGACGTTTGAATTTGAACATATATTACAGTATTTTTCGATCA
TGGTTGCAAGACACCAGCCGTGACGTTCCACACTGGGTCGAGGGCCAGGG
GATAATCGTCAACCTCACTGTGTGATATATCGGTCGCGCCGATTCTATCG
GTCCTCGGATAAGTTATATCGCAGCGGCTCCCCTGTTTCGTCCAGTTACT
ATTCTCGAGTGGTACAATGCTTGTTTGGACATGGCTGGTGACTCAGATGT
TAAAAGCGTGCAGGGGTGACGCAGTGGTCTAATGTGGTTAGGTGGTCGCC
TCTGTTTTTGGAAGTTCGGGGTTCGATTCCCGGCGACAGCAAAATTGCAC
ACCTTTATTGTGCCATCTTGCGTCGCGGAAAGCGCGAGTAAGCACAATTC
GATGAAAGCCGACGAAGGAAGAAAGTGCTGCACCCTCCGTGATGATAATG
TAGGCGCTTACCGTAGTGGGGGGTGGGGAGGAGCGCCTATACTGTTATAC
GTGACCCCGAAACTGATTTGCGAAGAGAGATGGAGCTGGAGAGAGGAGCG
AGTTTCGGGTTCAGCTTTTTGCTTTCAGATTACCGGCTCCGGTCCTGGGA
ATGGTCCCCAAAATAGGCAAAAACTGGAAGGTTTTCAGTTCAAAAGATCG
AAATGACGTCCCGAGTCTGCGAGCGTTTGTTCCTGCTCACAGTATCAGAT
TATTCTCTTGTTCCTCCTCACATCTCTATAAAAAACACCACACACTACAC
ACACACGTGGAGCATGTGGTCCCATCGCGGAAAGCCCCTTGGTTGCCTCT
CGTGACGAGCCTCACAGAAGGAAGGAAGCGACAGGGGATCGTCAATCTTT
TTCAATTAGCGCAGCGACATGCATGCACGCGCAGGAGGTCGTTGCCTTGG
AGGGAGAATAGTCTCTTCATTGGGGAATGCGGCGACAAGCACAGAGTGTG
GTGCACACAGAAGCAATCGCTACTTGGCAGCGCTACAGGACTACAGTACT
GTGGTCCCTTCCGTGAACACCTTGGCCGCATCTTCTCGTGTCGAGGTTTA
TAGAAGGCAGGACAAGGACAACTCGAAACAAGCGTAGTCTGTATTTCGGG
GAATGCGACAAGCAGAAGGGCTATGGCTACTGTAGTTGACAAAACCAGCA
GAGGACAATCACAGAACATGGTGCAACAGCGGCGATCGCTGTCGGCAATT
GCGTAAAGCCAGAGAACAACAATACTACTGTGGTCCCATCCGCGAAGAAA
GCCTTGGTCGCCTCTCGCGTGTTCGTGCGGTTTTTTCCGCGAAGATTCGG
GGGCGAGGGTCCATGGTTGAACTCTGCGCTGTGAAGCGTTTGGGACAATC
CTATTAATAGAAAGGTTTACAATAAATGCCAAAAACAAAAAAATATATAT
ATACATACATGTCGTAGGTATTTCATAGTTGATATTTGTCTGAATTTTCC
TGGGCTACGAGGACTACTGTTTTATATAAGGAGCGTGAGCCTACGCAAGG
CATCACGTTATACGGTACCTTGTACCTTGTACCTTGTATCAGAAGACCTG
TTATTTAGAGCTAACTGACGGTAAGGAAATTCGTGATTTTGGTATAATAT
GGGTTCGTTACGGCTGAGTTTTGTTAGTAGAGTAGTATTACTATTACTAC
GAACTATTATTACTCGATTCGATTTCCTCTCTCGCATATCCTGCTCATGA
GGAGATCGATTTGTTAATCCCTACTGATGATACTACAGTACGGTAGTAAG
GAGTATGATAGTTGCTGTGGTACTGAACTCGACATTTTTGTTTTTTTTTG
TGATGCACGCAACGGAAATTCGCGTCTCTCTTTCTCCGTAGAATAGAAGA
AGCAGCACAACAGTGACTCTTGATGTTGACTACGACGGTGGTTACTGCAC
GTTTGGCAGGACGCTTTTTTGGGGGAAACATCGACAATTTTGGTTGACAG
CATTGGCACGTCATGGTAGCATTTAAGCTTTGCCGTTTTACCACTTTGGC
GAAAACTATGGTTGACCATACAAACTCTACATAAACAATTTCCTGGAGGT
TGCTGGCCACACACTATTAGTAGTAGTAGTCTCGATTCAAGAGCGACACA
GAGTCGAAAACCACTTTTGCTTGATTTCAGCGTGGAAGGCGTGGCTTTTG
GCCCCTCCAACTGTCTGCGCCGTAGTCGTAGGGTGGCTGGTTGGGGTTAG
GGTCGGGTTGGGTTGGGTTCGCTCGGCACAAATTAAAAATAAGTTGTGTC
TGTAACAGTTTTCGTCTAAGTGATAAAAGAGACCTCGCTAACACAAAGAA
AAAAAGAAATTTCTGCCCTACAATGTTGTTTTTAAGGCGGCTCGTCGAAA
GGTCCGTTCTACGCTGAACATATAATACTGATTTTTTCTTTGCCCCGGTT
GTCGACAAAAAAAACGCCTCTGTAATTTAGGAACACATCACTCAACGGCT
TCTGCCCGTCAAGGATCGGATGCTTGCACAGCTAGCCCGAGAATCAGAAA
GAATGGAGAAGAGCAATAATGCTGCTGCAACCGAAGTAGCGTCGTCATAT
CTGACGTCGTCGAGCGGAACCGCAGTGAGCGATGATTGGATGGATTCTTC
CGACGGCATGCTCAACGACGGCGCAAGTTCGACAGAGGTAAAAATGTTTC
TATAATACTTCGAAGTATTAGTCCAATCTAATCGCCCGTAAGTTTATTGA
GTTTTTTTACGTGCGCGACAGAGTACGTGTCTGTTGCAGCTTCAAGTCTA
TCATAGTGTACAAGATTGTGGAGCATCTGAGGACCGATAGACTCCGCGCG
ACCCTTGACCCCCGACACCAGTTTCGAGCGTCACGGCTGATGTGTTTGGA
GTTGGTCAGACAACACTGCAGATAACAAGCATCAAGTTTGCTTATTTTTC
CGTTTGTCTGTTTTATGTGTCCTCTGCCCCGGGTGCTTTTTATGGAAAAA
ACGCGCTTAACGGAAGAAGTCTACATTACGAAAATTTGTGCTGTGGTGTG
GCCACTTCTAGAGACGGTCATGGGTATATCATGTTGCTGCCTCGTGTGCG
CCTTACCATGTACACACTACGTGGTTATCATCCCACTTTCGCGGAGGTAT
GGTTCTCCACCCCGCACAATACTACAATAATTCAAGACATTAAAAAAGTT
CGACTTTCTTCGTAGGAGACGATATAATATATTCTGCAGTGGTATATTTG
TTGTATAGTAGTAGTGTGGTAGTAGTAGGTACCAGGTAGTAGGTAGAAAT
TCTATTAATGGTATGAAACGCCAAGAAATTAATTGATTCATACTGAGGGG
TGGCCCAGTGGTCTAATGACTAGGGTATTTCCTCTGTTGGCGGAAGTTGG
GGGTTCGATTCCCGGTGGCACTTTTCCGTGTCATTTTCCGTCGCGGAAAA
CGCAAGAAGAGCGTGAGTAAGCACAATTCGATGAAAGTCGACGAGGGAAG
AAAGTGCTGCACTCTTCTCGCGATAAAAATGTAGGCACGTACCGTAGTAG
TGGGAAGGAGGAAGGAGCGCCTACTACGTGACCCCGGATCTGAGTTACGA
AGAGAGATGGAGCTAGAGAAAGACTAGGGCGAAGATAATAAATGGGACGG
AAAAAAAAAAAACTAATGCAAGACATTATTGATGTTTTGAGTTGATTATT
TTTCACTTGGCTGCTACTGTGGCTACTTTGAGTTGAAGGAGACGAGTTTG
GTTAAAAAAAAAAATAGCGTCAACAAAAATTGTTTTTGCTACTCGTTGTA
GTTGTACTGGTTATAAAACTTGCCGACTTGGCTATTTGTGTGTCCTCCTT
GATCTCAACAACAACAAAAAAGTAAACACGCAATGTCTATTATATTGTGT
TAATCTTTCATGTCGATTCACGGCTCGCGTGGTAATATTACTGTTACAAA
AAGGCCGGGAAAGAAAGAGAGCGTCGCTTCGCCCGTCATATTTCGCGTCC
TTAAAATAGTGGTACGTGGAAATCGAGACCCCCCCCCCCCCCTCCCTTGA
AGGTGGCTCTGTTAGAGGAGTATGATAACAACGGTGGTCCGTCTCGAAAG
GGATGTATGGCGTGGTCAATGATGAAATGGCTAAGGCACGCAACAAATCA
GGGATGCATGGTCAATGGTCAAATTACCTAAGGCAAGCAGCAAACGAATA
CTCGCCCCGCCCGCCGCCCGCCCCCAACGAATATAGCATGTGTTGATTAT
TATTAGTGCTCCATTGGGAGTAGAAACGGTTGTCCGTCTCGAAACAGAAA
AGCTAAGGGATGGGTGCTGCATGGTCAGATTATCAAAATGACGTTAAGGC
AAGCAACAAGAGAGAGACCCCCCCCACCGCCAATGTTTTTTTTTTTTTAC
TGCTTGCTGCTGCAGGCGATTCCAGGTGGCGACTACTCGGGCCTTACGTC
ATCCTCTTCCTCGATGGCAAGGCCGTGTTCGTCGCTGTCTCTGGCTGACC
TTGGCGATCTCTGCGGAGATGAAGATGCGGACGATGACTGCGGCGGCGCG
TTTCTGGTGGGGAGGGATTGTGACGTCGGCGGCTCTGGGATCGTGCTCGA
CCTCTACGGTTTGGGACAGGTGCGGATGTGGCGGAGGGGTCAGGTGCACT
ATCGCCTGTCACCTCTTTCAATAGTTCGCCCGAAGCACACGGTGGTAGTG
CGCGAGTTTTCAGTCATTCGTTCTACCACGTACATGTTATGGAGAGGGTG
GTTGCCAGTTTTAGACGAGAACTGTGGTTTGACACGCCTTCTGTGCTTTT
TTTTCGATTCATGTCGACCCTAACACCTACCGCCCTACGACTACGACTAC
GACAGTACGACTACGAGAGTACGACTACGGCACAGACAGTACTCGTAGTA
GTTGGTGGGGCCAAAACCGACGCCTTCGGTGCTGAGGAAACGCAAATAGC
CGTTCTTCTCGGAAAACTCCTGGATTTTTTTTTTTTGACATTTTTTTAGT
TTTTGTGGTAAAAACCATAGTTATCGTTTACGGTAAAAGTGGTGAAAACG
CTACTGCCCCAACTAGCAAGCCGTTGAATATTTACAGGCTTGCCAGATAT
GTACTAGAACCATTATTACATAGAAAAGATATCGCCTTTGACAACTTAGC
CTAACCGCCATAAAGTAGTATTAATAGGGTATCATGGAGGCCATACATGA
ATAAGCCTCTGGGTGCTCGTATTTTTGCGCCCGTCGGTGTGTGTGATAGA
TCTGACGCACATTGAGCGACCTCAGTTGCTGTTTGGACTGAAGCGCGATT
GGTGCGTAAACTCATGCTAACTGTTGATTGGTTGATTGATCGAGTGGTAC
GTACACTCTTTTGTCACGCAATTAGTCGTAGTATTTTCCCCATCTCAATC
TTTGCACTTTTTTTTATTGCATGTGTTTGTATGGAAGTGGAGGATTCATA
GTCGCAAGATGACGCGCTTGGAGTCCGTCCGCCCAAGGAAAGACGGGAAG
ATACGACGAAAACAGGCGGCGAGAGTCCTCTAGTGAAAAGAGACGCGATA
GATATGAGACAGAAGCTTGCAACAGTAGTGACGCATTGCGTAAAAAATGC
GAATGATAATGTTACGAAGTAGCTGCGGGATTCGCGGTGTTTGCTACCCA
GCCTATCATACGTAGCCAGCGGACGTGTGTGCTGGTTTTTGTATTGCGTC
GTAAGAATGAGGATTCGTTCTTGGTGACAGCGATGATGACCCGAAAGCCG
AAAACTGTTTGTATCGAAAATATCCATGGCAACGATTCTTGTATAGACGA
AAACTATGGTTGACACAGCTTATTTTTATTGATTTCACTTTGTGCCGACC
CGACCCTAACCCCAACCACCCACGGTACTAGTAATTCTACGGCACAGTTG
AAGGCTAGAATCGCCACCTCGGCGTTGAAAAGAGGAAACGCGGATTTCGC
TCTGTGTGGCTCTTGAATGGAGACTACTATGATCGTACTGTGTCGCTAGA
AAACTACTTGAATTTGTTTATATAGAGCATAGTTTCGTGAATCATAAGTG
GTAAAACACTACTGATGGCAACATCTCCATTTTCGTCTCTCTCTCTAGGA
TGGAAGAATCAGTACGGTACAGACTTTTGAGTACGCTACTCGGGATGTCG
TAGGGTATAGAAATGACGAGTTTTATTTTGAAGACGACAGCCACAACTTG
CCCAACAAAAAAAATGAACCTGGACACAGAACACAATGTAAGGTACCTGG
TACGGAAAAAAAAAAAAAAAAAAATGGGGCCCTTACCTGAACTATAAAAG
TGCATATAATACGTGAACTATTCTGACGGTGGTTGCAGGGTGGCATGAGC
GGACAGCATAGATGACGTTTCAGTGGCTCTTGATTGGGATGCCTCAGCCT
TTTACGATAGCAATGACGCGATGAAATGAAGGGGTTTTATTTTAAAAAAG
CTTACGAATACATCAGCCGTGACGTTCCAAACTGGTTCGGGGGCCGGGGG
ATAATCGTCAATCTCACTGTGTGATACTTTCGGTCACGCGGATTCTGTCG
GTCGTCAGATAAACTACTACAACGTAGTGACTCCCCTGGGGTGGCCTTTC
ATGTAATGTTATTGTTTCAAGCCAGTTCCACCGCCGCCGTTTCCCGCCGT
ATGCGCTGCCTCAACCTCAGTGTGTGCCAACCCTTGTGCCTACATACGTA
ACGCTTTCTGGGGGGGGGAAGGGCAATTACCGATTTCCTGCAGATGAATT
GTGTGTTGCTGTCGTGTTTAGATCATACTGCAGTGTTATTATTGCCTGGA
GCATAATGACGGTTGAATTTCGGAGGACTCACTGGTCAGTTTTTTTGTAC
CCTGCTCCCCCCCCCCCCCATGCACGCCCTAATCCAAAACCCATTTGTTG
GGAAACTCCACTGTTAATATACACGCAGGGAAAGGACTCGTTCTTGCCTT
TGTCGCGGGACAGAAGCACGGAACGGTCGGCGTCGATTTCCACGCTGTCG
TCGGTTTCTGCCATGACTGACGGAGAATTTTCGGGCGACGCTTTGTCGGT
GGACGCTGACTGTTCCGCTGGCGGCGGTGAGGGACACCCCGGCGCGGCAT
CTTCGGCGACCCTCAAGGGCGGCAGCGGTATCGACCAAGAGATGGGGGAA
CTGTCGGAGCTGTTTGCCCCGGATGCGTTTCTCCTGAGCACGGTCTTGGA
CACGGAAGAGATGGAGGTCACGGCAGAGGAGATGGCGGTGTCTGAGACTG
CAGCTGCTGTTGCTGCTCCGGTGCAGGTTGATGCTAACGCGGAAGAGCGG
GGGGTCAAGAAGGCGGACGGGTCTATGGCGGCGAGTACTGTCGCTGACGC
back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig1:2812827..2826526- >mRNA_D-herbacea_F_contig1.111.1 ID=mRNA_D-herbacea_F_contig1.111.1|Name=mRNA_D-herbacea_F_contig1.111.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2448bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2812827..2826526- (Desmarestia herbacea DmunF female)
AAGCGAGCGTCGAGGTCTCGAAAGGCCGCCGGCGCGAGCATCGGAACGGC
GGCAGCGACAGCCTCTGCCAAGTCTCCGCCCTTCAAGGCCGTCCAAGAGC
TGCAACCCAGCCCCGAAATGCAGGCCAGGCTTGAGAGCATGCAGCACAAG
TTCGGCTCGCACCTGGCCTTCTTGGTAACAGAATTCACCAAGATGGAGGC
GCACTTGTCGCCTGAGGTGGAAGCAGGCGGGCCGAAGCGAGCGTCGAGGT
CTCGAAAGGCCGCCGGCGCGAGCATCGGAACGGCGGCAGCGACAGCCTCT
GCCAAGTCTCCGCCCTTCAAGGCCGTCCAAGAGCTGCAACCCAGCCCCGA
AATGCAGGCCAGGCTTGAGAGCATGCAGCACAAGTTCGGCTCGCACCTGG
CCTTCTTGGTAACAGAATTCACCAAGATGGAGGCGCACTTGTCGCCTGAG
GTGGAAGCAGGCGGGCCGAAGACGGATGATGCATCGGAGGAGGAAGAGGA
TGGGCCGCAGCAGGCTCTGGCTCGGCTGCGATTTTTCATTACTCACGTCA
AAAATACCAGGGAGAGGATGGAGCAGGCCAGGAGTGGTCTGCACCACTAC
ACATGCTCTCAGCTCGACATGCTCGAGAAGACGGATGATGCATCGGAGGA
GGAAGAGGATGGGCCGCAGCAGGCTCTGGCTCGGCTGCGATTTTTCATTA
CTCACGTCAAAAATACCAGGGAGAGGATGGAGCAGGCCAGGAGTGGTCTG
CACCACTACACATGCTCTCAGCTCGACATGCTCGAGGAACACATCACTCA
ACGGCTTCTGCCCGTCAAGGATCGGATGCTTGCACAGCTAGCCCGAGAAT
CAGAAAGAATGGAGAAGAGCAATAATGCTGCTGCAACCGAAGTAGCGTCG
TCATATCTGACGTCGTCGAGCGGAACCGCAGTGAGCGATGATTGGATGGA
TTCTTCCGACGGCATGCTCAACGACGGCGCAAGTTCGACAGAGGAACACA
TCACTCAACGGCTTCTGCCCGTCAAGGATCGGATGCTTGCACAGCTAGCC
CGAGAATCAGAAAGAATGGAGAAGAGCAATAATGCTGCTGCAACCGAAGT
AGCGTCGTCATATCTGACGTCGTCGAGCGGAACCGCAGTGAGCGATGATT
GGATGGATTCTTCCGACGGCATGCTCAACGACGGCGCAAGTTCGACAGAG
GCGATTCCAGGTGGCGACTACTCGGGCCTTACGTCATCCTCTTCCTCGAT
GGCAAGGCCGTGTTCGTCGCTGTCTCTGGCTGACCTTGGCGATCTCTGCG
GAGATGAAGATGCGGACGATGACTGCGGCGGCGCGTTTCTGGTGGGGAGG
GATTGTGACGTCGGCGGCTCTGGGATCGTGCTCGACCTCTACGGTTTGGG
ACAGGCGATTCCAGGTGGCGACTACTCGGGCCTTACGTCATCCTCTTCCT
CGATGGCAAGGCCGTGTTCGTCGCTGTCTCTGGCTGACCTTGGCGATCTC
TGCGGAGATGAAGATGCGGACGATGACTGCGGCGGCGCGTTTCTGGTGGG
GAGGGATTGTGACGTCGGCGGCTCTGGGATCGTGCTCGACCTCTACGGTT
TGGGACAGGGAAAGGACTCGTTCTTGCCTTTGTCGCGGGACAGAAGCACG
GAACGGTCGGCGTCGATTTCCACGCTGTCGTCGGTTTCTGCCATGACTGA
CGGAGAATTTTCGGGCGACGCTTTGTCGGTGGACGCTGACTGTTCCGCTG
GCGGCGGTGAGGGACACCCCGGCGCGGCATCTTCGGCGACCCTCAAGGGC
GGCAGCGGTATCGACCAAGAGATGGGGGAACTGTCGGAGCTGTTTGCCCC
GGATGCGTTTCTCCTGAGCACGGTCTTGGACACGGAAGAGATGGAGGTCA
CGGCAGAGGAGATGGCGGTGTCTGAGACTGCAGCTGCTGTTGCTGCTCCG
GTGCAGGTTGATGCTAACGCGGAAGAGCGGGGGGTCAAGAAGGCGGACGG
GTCTATGGCGGCGAGTACTGTCGCTGACGGAAAGGACTCGTTCTTGCCTT
TGTCGCGGGACAGAAGCACGGAACGGTCGGCGTCGATTTCCACGCTGTCG
TCGGTTTCTGCCATGACTGACGGAGAATTTTCGGGCGACGCTTTGTCGGT
GGACGCTGACTGTTCCGCTGGCGGCGGTGAGGGACACCCCGGCGCGGCAT
CTTCGGCGACCCTCAAGGGCGGCAGCGGTATCGACCAAGAGATGGGGGAA
CTGTCGGAGCTGTTTGCCCCGGATGCGTTTCTCCTGAGCACGGTCTTGGA
CACGGAAGAGATGGAGGTCACGGCAGAGGAGATGGCGGTGTCTGAGACTG
CAGCTGCTGTTGCTGCTCCGGTGCAGGTTGATGCTAACGCGGAAGAGCGG
GGGGTCAAGAAGGCGGACGGGTCTATGGCGGCGAGTACTGTCGCTGAC back to top
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